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D. DNA, RNA D1. STRUCTURE: DNA & RNA are polymers of nucleotides. synthesis NUCLEOTIDES (monomers) hydrolysis NUCLEIC ACID (DNA / RNA) (polymer) Nucleotide- nucleotides are composed of 3 parts: Base P Phosphorous group 5 – carbon (pentose) sugar DNA: Deoxyribose RNA: Ribose BASE: DNA: Adenine Thymine Guanine Cytosine RNA: Adenine Uracil Guanine Cytosine Bases are single or double ring structures that contain nitrogen - “Nitrogenous bases” Purines and pyrimidines Adenine, Guanine: Purine (Double ring bond) -larger Thymine, Cytosine: Pyrimidines (Single ring bond) -smaller 4. Complementary base pairing - A 2 Ring Base always bonds with 1 Ring Base. A always bonds with T C always bonds with G The nucleotides string together (Synthesis) by joining the sugar of one nucleotide to the phosphorous of the adjacent nucleotide. This forms a sugar - phosphorous backbone. The bases stick towards the centre and form hydrogen bonds with the bases of the adjacent strand. The two strands twist, forming a spiral shaped molecule called a double helix - Sugars & Phosphorous of nucleotides bond forming the “Sugar Phosphorous backbone” Bases bond toward the center - Hydrogen bonds between bases - The double spiral shape: -Double Helix D2. REPLICATION - When a cell divides, it must make a second exact copy of its DNA. There are 3 basic steps: 1. - DNA “unzips” at the hydrogen bonds between the bases. (an enzyme does this) 2. - Free floating nucleotides line up with their exposed complementary bases. - complementary base pairing. - new hydrogen bonds form between the complementary bases. 3. - An enzyme runs down the bases and bonds the sugar / phosphorous backbone. DNA Polymerase - both copies are identical - any mistakes in copying is a MUTATION. - each cell receives 1/2 mother (old) DNA and 1/2 new DNA (semiconservative) - the entire process involves many enzymes DNA Replication D3. RECOMBINANT DNA Recombinant DNA is the use of various techniques and enzymes to recombine DNA from different organisms. Genes from one species can be cut out and inserted into the DNA of an entirely different species. The new gene can then be expressed by the recipient species. Recombinant DNA involves the use of special enzymes called restriction enzymes. D4. USES FOR RECOMBINANT DNA There are many possibilities for uses of recombinant DNA. 1. Protein production. It is possible to isolate a gene from one organism (say Human insulin), and using recombinant DNA techniques, insert that gene into a different organism (say E. coli bacteria). The new organism can then produce that protein. By culturing large quantities of the bacteria it is possible to collect large amounts of Human insulin inexpensively. Many other useful human proteins are being produced in this manner (interferon, Growth Hormone, interleukins etc.) 2. Gene therapy It is possible to correct genes in individuals that have non-functional (mutated) genes. For example, the corrected gene for the protein that causes Cystic fibrosis has been inserted into a virus that infects human lung cells. The virulent part of the virus genes has been deactivated. The virus then injects the corrected gene into the cells of the cystic fibrosis patient, and their symptoms are greatly reduced! 3. Transgenic organisms (have a foreign gene inserted into them) Selected genes can be inserted into a plant to give it features that were not possible through breeding. For example, a bacterial insect toxin gene can be inserted into a plant (eg. potato) so the plant is now toxic to insects, and fewer insecticides are needed in order to grow it! Text p. 525 – 535 for Recombinant DNA technologies D5. COMPARE AND CONTRAST DNA and RNA DNA: - Deoxyribose (5 C sugar with one less oxygen) - Bases: Adenine, Guanine, Thymine, Cytosine - Strands: Double Stranded, with base pairing - Helix shaped - Only found in Nucleus - Longer than RNA - 1 Kind RNA: - Ribose (5 C. sugar with one more oxygen) - Adenine, Guanine, Uracil, Cytosine - Single Stranded - Not Helix shaped - Found in nucleus and cytoplasm - Shorter - 3 Kinds (messenger - mRNA, transfer - tRNA, ribosomal - rRNA)