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Mutations Sickle Cell Anemia Mutations Can be a change in the DNA base sequence or a change in a chromosome Mutant- someone who has a mutation Consequences of Mutations Mutations can be – Helpful Ex: Give immunity to HIV Ex: Give immunity to infectious diseases – Harmless – Harmful Ex: Disease causing mutations (some have to be in homozygous form) What do Mutations do? Can stop or slow the production of a protein – Ex: Cause a protein to overproduce – Ex: Impair a protein’s function – Ex: When can Mutations happen? Germline mutation- happens before meiosis; affects all cells in the new organism Somatic mutation- happens before mitosis; after only immediate daughter cells and their descendents – More severe the earlier it occurs – Creates a mosaic – Can lead to some forms of cancer Spontaneous Mutations Change occurs with no outside influence Often occurs because of a mismatch in base pairs during replication Results in de novo mutations Mutation Rates Different in different genes Depends on – Gene size – Gene location – Gene sequence Mutation Hot Spots Sequence Regions – That are repetitive – Symmetrical or repeated sequences on the same strand – Palindromessequence that reads the same forward and backward Sections confuse replication enzymes Mutagen Substance causing a mutation – Chemicals – Radiation Exposure can be accidental or purposeful It can also come from the natural environment Huntington’s Disease Types of Mutations Point mutations- change of a single base – Transition- exchange of one pyrimidine for another or one purine for another – Transversion- exhange of a pyrimidine for a purine or vice versa – Missense mutation- changes one amino acid in polypeptide chain – Nonsense mutation- creates a stop codon in the middle of the polypeptide chain – Splice site mutations- alters the splicing of the pre-mRNA Types of Mutation (cont) Frameshift mutations- move the reading frame; can be point mutations; all amino acids after mutation can be affected – Insertion- addition of bases Tandem duplication- repetition of a sequence placed very close to the original – Deletion- removal of bases Expanding Repeats Repeated section of DNA is replicated incorrectly causing extra repeats Repeats are added to during every generation (higher severity; earlier onset) Repeats often create symptoms when they reach higher than 40 Wild type "Normal Gene" THE ONE BIG FLY HAD ONE RED EYE Missense THQ ONE BIG FLY HAD ONE RED EYE Nonsense THE ONE BIG Frameshift THE ONE QBI GFL YHA DON ERE DEY Deletion THE ONE BIG HAD ONE RED EYE Duplication THE ONE BIG FLY FLY HAD ONE RED EYE Insertion THE ONE BIG WET FLY HAD ONE RED EYE Expanding (P) THE ONE BIG FLY HAD ONE RED EYE Expanding (F1) THE ONE BIG FLY FLY FLY HAD ONE RED EYE Expanding (F2) THE ONE BIG FLY FLY FLY FLY FLY FLY HAD ONE RED EYE Other Causes of Mutations Pseudogenes – Replicate of gene made at earlier time – Currently not used (collected enough mutations) – May still be close enough to cross over with real gene causing mutations in real gene Transposons (jumping genes) – Jump into working gene causing mutation Xeroderma Pigmentosum Minimizing the Effects of Mutation Position – Change in third position often does nothing – Change in second position often either does nothing or changes one amino acid for a similar one Conditional mutation – Mutation only affects the phenotype under certain conditions Stem cell DNA – Stem cell may retain old template DNA strands and send new strands into progenitor cell DNA Repair: Photoreactivation DNA is damaged by UVB wavelengths Forms thymine dimers – extra covalent bond between thymines next to each other on the same strand – forms kinks in DNA; disrupts replication and transcription Enzymes called photolyases absorb energy from light and break these bonds Humans do not use this DNA Repair: Excision Repair Enzymes snip out section with pyrimidine dimers DNAP fills in gap with correct nucleotides Humans have two types – Nucleotide excision repair Used for many types of damage Repairosome- group of enzymes that cut out and replace up to 30 nucleotides – Base excision repair Used for oxidative damage Replaces up to 5 nucleotides at a time Nucleotide Excision Repair Base Excision Repair DNA Repair: Mismatch Repair Repairs errors that occur because of replication Enzymes look for loops in DNA (sign of mismatching) and cut out and repair bases