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YONG TAE KWON, PH.D. AFFILIATION Department of Biomedical Sciences and Protein Metabolism Medical Research Center, Seoul National University College of Medicine 103 Daehakro, Jongnogu 110-799, Korea Tel: +82-2-740-8547; Fax: +82-2-3673-2167 E-MAIL: [email protected] ACADEMIC EDUCATION 1984 B.S., Seoul National University, Korea 1986 M.S., Seoul National University, Korea 1993 Ph.D., Seoul National University, Korea RESEARCH & PROFESSIONAL EXPERIENCE 1994~1997 1997-2002 2002-2008 2008-2013 2010-2013 2013-present 2014-present Postdoctoral Fellow, California Institute of Technology, CA, USA Research Fellow, Senior Scientist, Key Staff, Caltech Assistant Professor, School of Pharmacy, University of Pittsburgh Associate Professor, School of Pharmacy, University of Pittsburgh WCU Professor, Seoul National University Professor, Department of Biomedical Sciences, Seoul National University Director, Protein Metabolism Medical Research Center, Seoul National University (With Aaron Ciechanover) RESEARCH INTEREST 1. Regulated protein degradation by the ubiquitin-proteasome system 2. Proteolysis by the autophagy-lysosome system 3. Developing small molecules that regulate proteolysis in diseases RECENT SELECTED PUBLICATIONS 1. Cha-Molstad H.J. et al. (2015) N-terminal arginylation targets endoplasmic reticulum chaperone BiP to autophagy through p62 binding. Nat. Cell Biol. 17:917-929. 2. Kravtsova-Ivantsiv Y. et al. (2015) The ubiquitin ligase KPC1 promotes processing of p105 NF-κB1 to p50, eliciting strong tumor suppression. Cell 161:333-347. 3. Ciechanover, A and Y.T. Kwon. (2015) Degradation of misfolded proteins in neurodegenerative diseases: therapeutic targets and strategies. Exp. Mo. Med. (in press) 4. Tasaki, T. et al. (2013) UBR4, an N-recognin of the N-end rule pathway, and its role in yolk sac vascular development and autophagy. Proc. Natl. Acad. Sci. USA 110:38003805. 5. Kim, S.T. et al. (2013) Autophagy 9:1100-1103. 6. Tasaki, T. at al. (2012) The N-end rule pathway. Ann. Rev. Biochem. 81:261-289. 7. Sriram, S.M. et al. (2011) The N-end rule pathway: emerging functions and molecular principles of substrate recognition. Nat. Rev. Mol. Cell. Biol. 12:735-747. 8. Lee, M.J. et al. (2012) Characterization of the arginylation branch of the N-end rule pathway in G-protein-mediated proliferation and signaling of cardiomyocytes. J. Biol. Chem. 287:24043-24052. 9. Sriram, S.M. and Y.T. Kwon (2010) The molecular principles of N-end rule recognition. Nat. Struct. Mol. Biol. 17:1164-1165. 10. An, J.Y. et al. (2010) UBR2 mediates transcriptional silencing during spermatogenesis via histone ubiquitination. Proc. Natl. Acad. Sci. USA. 107:1912-1917. 1 The N-end rule proteolytic pathway in regulation of p62-dependent autophagy and autophagic protein degradation The N-end rule pathway is a proteolytic system in which destabilizing N-terminal residues of short-lived proteins function as a class of degradation signals (degrons), called N-degrons. Ndegrons are recognized by specific recognition components, such as ubiquitin ligases which mediate ubiquitination, leading to selective proteolysis by the proteasome. Destabilizing residues of the N-end rule pathway include the N-terminal arginine (Arg) residue which can be post-translationally created by ATE1-encoded Arg-tRNA transferases (R-transferases) that transfer the amino acid L-Arg from Arg-tRNAArg to the N-termini. Recognins that recognize the N-terminal Arg residue of N-end rule substrates include the UBR box of a family of proteins, called UBR box proteins. A number of cytosolic and nuclear proteins have been shown to be targeted through the activity of their N-terminal residues as proteasomal degrons in various biological processes. In this lecture, I will overview the functions and mechanisms of this unique proteolytic system, with an emphasis on components and hierarchical structures, substrates, substrate recognition, and the link to human genetic diseases. The topics also include our recent discovery that a set of endoplasmic reticulum (ER)-residing proteins are N-terminally arginylated, leading to cytosolic accumulation of N-terminally arginylated ER proteins, including BiP/GRP78. Arginylated BiP (R-BiP) is associated with misfolded proteins in stressed cytosol and binds to p62 through its N-terminal Arg residue as an activating ligand, leading to allosteric activation, aggregation, and delivery of cargoloaded p62 to autophagosomes. By developing small molecular ligands to p62, we propose that N-end rule ligands may be used as a therapeutic means to activate autophagic removal of cytotoxic materials, such as pathogenic protein aggregates, from degenerating neurons. Keywords: The N-end rule pathway, proteasome, autophagy, N-terminal arginylation, p62, protein aggregation, neurodegenerative diseases 2