Download Leukaemia Section del(11)(q23q23) MLL/ARHGEF12 Atlas of Genetics and Cytogenetics in Oncology and Haematology

Survey
yes no Was this document useful for you?
   Thank you for your participation!

* Your assessment is very important for improving the workof artificial intelligence, which forms the content of this project

Document related concepts

Gene nomenclature wikipedia , lookup

Endogenous retrovirus wikipedia , lookup

Gene regulatory network wikipedia , lookup

RNA polymerase II holoenzyme wikipedia , lookup

Ancestral sequence reconstruction wikipedia , lookup

Signal transduction wikipedia , lookup

Paracrine signalling wikipedia , lookup

Protein wikipedia , lookup

Artificial gene synthesis wikipedia , lookup

Metalloprotein wikipedia , lookup

G protein–coupled receptor wikipedia , lookup

Transcriptional regulation wikipedia , lookup

Expression vector wikipedia , lookup

Gene expression wikipedia , lookup

Bimolecular fluorescence complementation wikipedia , lookup

Interactome wikipedia , lookup

Magnesium transporter wikipedia , lookup

Point mutation wikipedia , lookup

Western blot wikipedia , lookup

Protein structure prediction wikipedia , lookup

Nuclear magnetic resonance spectroscopy of proteins wikipedia , lookup

Silencer (genetics) wikipedia , lookup

Protein purification wikipedia , lookup

Histone acetylation and deacetylation wikipedia , lookup

Protein–protein interaction wikipedia , lookup

Proteolysis wikipedia , lookup

Two-hybrid screening wikipedia , lookup

Transcript
Atlas of Genetics and Cytogenetics
in Oncology and Haematology
OPEN ACCESS JOURNAL AT INIST-CNRS
Leukaemia Section
Mini Review
del(11)(q23q23) MLL/ARHGEF12
Jean-Loup Huret
Genetics, Dept Medical Information, University of Poitiers, CHU Poitiers Hospital, F-86021 Poitiers, France
(JLH)
Published in Atlas Database: September 2011
Online updated version : http://AtlasGeneticsOncology.org/Anomalies/del11q23q23ID1420.html
DOI: 10.4267/2042/46946
This work is licensed under a Creative Commons Attribution-Noncommercial-No Derivative Works 2.0 France Licence.
© 2012 Atlas of Genetics and Cytogenetics in Oncology and Haematology
Clinics and pathology
Disease
Acute myeloid leukemia (AML)
Epidemiology
Two cases so far: a 38-year-old male patient with a
history of occupational exposure to herbicides and a
M4-AML, and a 77-year-old female patient with a
M5a-AML (Kourlas et al., 2000; Shih el al., 2006).
Evolution
The M4-AML patient underwent complete remission,
but died 6 months later from an unrelated cause.
Cytogenetics
Cytogenetics morphological
The del(11)(q23q23) has been missed by cytogenetic
analysis; both cases were hyperploid with +8 and other
abnormalities.
Genes involved and proteins
MLL
Location
11q23.3
Protein
A major transcript of 14982 bp produces a 3969 amino
acids protein from 36 of the 37 exons. Contains from
N-term to C-term a binding site for MEN1, 3 AT hooks
(binds to the minor grove of DNA); 2 speckled nuclear
localisation signals; 2 repression domains RD1 and
RD2: RD1 or CXXC: cystein methyl transferase, binds
CpG rich DNA, has a transcriptional repression
activity; RD2 recruits histone desacetylases HDAC1
Atlas Genet Cytogenet Oncol Haematol. 2012; 16(2)
141
and HDAC2; 3 plant homeodomains (cystein rich zinc
finger domains, with homodimerization properties), 1
bromodomain (may bind acetylated histones), and 1
plant homeodomain; these domains may be involved in
protein-protein interaction; a FYRN and a FRYC
domain; a transactivation domain which binds CBP;
may acetylates H3 and H4 in the HOX area; a SET
domain: methyltransferase; methylates H3, including
histones in the HOX area for allowing chromatin to be
open to transcription. MLL is cleaved by taspase 1 into
2 proteins before entering the nucleus: a p300/320 Nterm protein called MLL-N, and a p180 C-term protein,
called MLL-C. The FYRN and a FRYC domains of
native MLL associate MLL-N and MLL-C in a stable
complex; they form a multiprotein complex with
transcription factor TFIID. General transcription factor;
maintains HOX genes expression in undifferentiated
cells. Major regulator of hematopoiesis and embryonic
development; role in cell cycle regulation.
ARHGEF12
Location
11q23.3
Protein
Better known as LARG, ARHGEF12 contains a PDZ
(postsynaptic density protein, Drosophila disc large
tumor suppressor, and zonula occludens-1 protein)
domain, which localize ARHGEF12 to the membrane,
a regulator of G protein signalling-like domain (RGSL
or RH), which binds to activated heterotrimeric G
protein alpha12/13 subunits, a Dbl homology (DH)
domain, responsible for exchange activity, and a
pleckstrin homology (PH) domain, involved in the
regulation of the process. Regulatory protein involved
in the GDP/GTP exchange reaction of the Rho proteins;
activates a Rho-GTPase-dependent signaling pathway;
activated by FYN.
del(11)(q23q23) MLL/ARHGEF12
Huret JL
Result of the chromosomal
anomaly
References
Kourlas PJ, Strout MP, Becknell B, Veronese ML, Croce CM,
Theil KS, Krahe R, Ruutu T, Knuutila S, Bloomfield CD,
Caligiuri MA. Identification of a gene at 11q23 encoding a
guanine nucleotide exchange factor: evidence for its fusion
with MLL in acute myeloid leukemia. Proc Natl Acad Sci U S A.
2000 Feb 29;97(5):2145-50
Hybrid gene
Description
5' MLL - 3' ARHGEF12
Fusion protein
Description
Joins amino acid 1362 from MLL to amino acid 309
from ARHGEF12. The fusion protein comprises the
Ala/Gly/Ser-rich region, poly-Gly stretch, three AT
hooks domains, poly-Pro stretches, and Zinc finger
CXXC-type domain from MLL fused to the RGSL,
DH, PH domains of ARHGEF12.
Atlas Genet Cytogenet Oncol Haematol. 2012; 16(2)
142
Shih LY, Liang DC, Fu JF, Wu JH, Wang PN, Lin TL, Dunn P,
Kuo MC, Tang TC, Lin TH, Lai CL. Characterization of fusion
partner genes in 114 patients with de novo acute myeloid
leukemia and MLL rearrangement. Leukemia. 2006
Feb;20(2):218-23
This article should be referenced as such:
Huret JL. del(11)(q23q23) MLL/ARHGEF12. Atlas Genet
Cytogenet Oncol Haematol. 2012; 16(2):141-142.
Related documents
Leukaemia Section t(3;11)(p21;q23) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section t(3;11)(p21;q23) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section ins(5;11)(q31;q13q23) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section ins(5;11)(q31;q13q23) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Gene Section ABI1 (Abl-Interactor 1) Atlas of Genetics and Cytogenetics
Gene Section ABI1 (Abl-Interactor 1) Atlas of Genetics and Cytogenetics
Leukaemia Section t(3;11)(q28;q23) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section t(3;11)(q28;q23) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Gene Section DAB2IP (DAB2 interacting protein) Atlas of Genetics and Cytogenetics
Gene Section DAB2IP (DAB2 interacting protein) Atlas of Genetics and Cytogenetics
Leukaemia Section t(11;20)(q23;q11) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section t(11;20)(q23;q11) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Gene Section AF9 (ALL1 fused gene from chromosome 9)
Gene Section AF9 (ALL1 fused gene from chromosome 9)
Gene Section AF15q14 (ALL1 fused gene from 15q14) in Oncology and Haematology
Gene Section AF15q14 (ALL1 fused gene from 15q14) in Oncology and Haematology
Leukaemia Section t(9;11)(q34;q23) AF9q34/MLL Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section t(9;11)(q34;q23) AF9q34/MLL Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section +11 or trisomy 11 (solely)  Atlas of Genetics and Cytogenetics
Leukaemia Section +11 or trisomy 11 (solely) Atlas of Genetics and Cytogenetics
Gene Section EEN (extra eleven nineteen leukemia fusion gene)
Gene Section EEN (extra eleven nineteen leukemia fusion gene)
Gene Section AF17 (ALL1 fused gene from chromosome 17)
Gene Section AF17 (ALL1 fused gene from chromosome 17)
Gene Section AF4p12 (ALL1 fused gene from chromosome 4p12)
Gene Section AF4p12 (ALL1 fused gene from chromosome 4p12)
Leukaemia Section t(11;11)(q13;q23) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section t(11;11)(q13;q23) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section t(11;19)(q23;p13.3) MLL/ACER1 Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section t(11;19)(q23;p13.3) MLL/ACER1 Atlas of Genetics and Cytogenetics in Oncology and Haematology
Gene Section SEPT6 (septin 6) Atlas of Genetics and Cytogenetics
Gene Section SEPT6 (septin 6) Atlas of Genetics and Cytogenetics
Gene Section MSF (MLL septin-like fusion) Atlas of Genetics and Cytogenetics
Gene Section MSF (MLL septin-like fusion) Atlas of Genetics and Cytogenetics
Leukaemia Section t(11;16)(q23;p13) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section t(11;16)(q23;p13) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section t(11;19)(q23;p13.1) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section t(11;19)(q23;p13.1) Atlas of Genetics and Cytogenetics in Oncology and Haematology
Leukaemia Section inv(11)(q13q23)  Atlas of Genetics and Cytogenetics
Leukaemia Section inv(11)(q13q23) Atlas of Genetics and Cytogenetics
Case Report Section
Case Report Section
Leukaemia Section t(X;11)(q26;q23) / ins(X;11)(q26;q23q23)  Atlas of Genetics and Cytogenetics
Leukaemia Section t(X;11)(q26;q23) / ins(X;11)(q26;q23q23) Atlas of Genetics and Cytogenetics