* Your assessment is very important for improving the workof artificial intelligence, which forms the content of this project
Download Glycolysis 2
Deoxyribozyme wikipedia , lookup
Fatty acid synthesis wikipedia , lookup
Catalytic triad wikipedia , lookup
Signal transduction wikipedia , lookup
Gene regulatory network wikipedia , lookup
Mitochondrion wikipedia , lookup
Lipid signaling wikipedia , lookup
Mitogen-activated protein kinase wikipedia , lookup
Paracrine signalling wikipedia , lookup
Ultrasensitivity wikipedia , lookup
Microbial metabolism wikipedia , lookup
NADH:ubiquinone oxidoreductase (H+-translocating) wikipedia , lookup
Basal metabolic rate wikipedia , lookup
Metalloprotein wikipedia , lookup
Biosynthesis wikipedia , lookup
Metabolic network modelling wikipedia , lookup
Nicotinamide adenine dinucleotide wikipedia , lookup
Enzyme inhibitor wikipedia , lookup
Biochemical cascade wikipedia , lookup
Fatty acid metabolism wikipedia , lookup
Blood sugar level wikipedia , lookup
Amino acid synthesis wikipedia , lookup
Oxidative phosphorylation wikipedia , lookup
Evolution of metal ions in biological systems wikipedia , lookup
Adenosine triphosphate wikipedia , lookup
Phosphorylation wikipedia , lookup
Lactate dehydrogenase wikipedia , lookup
Glyceroneogenesis wikipedia , lookup
Citric acid cycle wikipedia , lookup
Glycolysis 2 Lecture 26 Key Concepts • Gluconeogenesis vs. Glycolysis – Differences and similarities • Regulation of the Glycolytic Pathway – Glucokinase is a molecular sensor of high glucose levels – Allosteric control of phosphofructokinase activity • Supply and demand of glycolytic intermediates • Metabolic Fate of Pyruvate • • How do substrate availability and enzyme activity levels control glycolytic flux? Why is muscle lactate dehydrogenase activity required for short bursts of intense exercise? Overview of the Gluconeogenesis Pathway Gluconeogenesis is not the reverse of glycolysis. Many reactions are the reverse of the comparable reaction in glycolysis. Importantly, however, the “reverse” of the three kinase steps of glycolysis are replaced by different reactions catalyzed by different enzymes. Irreversible steps have actual changes in free energies (∆G) that are highly negative and require pathway-specific enzymes Differences between Gluconeogenesis & Glycolysis Differing reactions have negative ∆G in both pathways. Why is that the case? Multiple Cellular Compartments are Involved in Gluconeogenesis • Cytosol • Mitochondrion • Endoplasmic Reticulum Oxaloacetate is Produced in the Mitochondrion Pyruvate Carboxylase Biotin binding domain Malate Shuttle Without those vitamins, how would I ever make glucose? Glucose is Produced on the ER Membrane Know the difference in stoichiometry between glycolysis and gluconeogenesis! Interplay Between Pathways Regulation of Glycolysis • Glucokinase & Hexokinase • Phosphofructokinase • Pyruvate Kinase Glucokinase is a molecular sensor of high glucose levels Hexokinase I – – – – high affinity for substrate (Km for glucose is ~0.1mM) expressed in all tissues phosphorylates a variety of hexose sugars inhibited by the product of the reaction, glucose-6-P Glucokinase – – – – low affinity for substrate (Km for glucose is ~10mM) highly specific for glucose expressed primarily in liver and pancreatic cells not inhibited to glucose-6-P. Multiple Roles of Glucokinase Role in liver cells – traps extra glucose available from the diet so that it can be stored as glycogen for an energy source later Role in pancreatic β cells – glucose sensor – triggers insulin release Glucokinase as a Sensor of Glucose Levels GLUT protein= Glucose Transporter You should be familiar with this protein family Why does glucose stinulate Differences between Gluconeogenesis & Glycolysis What do you know, the enzymes that catalyze the irreversible reactions are also the regulatory enzymes! Allosteric control of phosphofructokinase activity Two phosphofructokinase isozymes: • phosophofructokinase-1 (PFK-1) – catalyzes reaction 3 in glycolysis – produces fructose-1,6-bisphosphate • phosphofructokinase-2 (PFK-2) – bifunctional enzyme that catalyzes the synthesis of fructose-2,6bisphosphate (F-2,6-BP), a potent allosteric regulator of PFK-1 activity PFK-1 is an allosteric enzyme • exists as a tetramer (a dimer of dimers) • in either of two conformations – the inactive T state or active R state – analogous to the hemoglobin tetramer PFK-1 is an allosteric enzyme The equilibrium between T and R states in a cell is controlled by allosteric effector molecules which bind to a regulatory site outside of the substrate binding pocket. Allosteric regulation of PFK-1 by ATP What does this graph tell us about the role of ATP in regulating PFK-1 activity? You should understand the relationship between AMP, ADP and ATP in regulation of this enzyme. Why is AMP used as an allosteric regulator instead of ADP? Allosteric regulation of PFK-1 by F-2,6-BP What do these graphs tell us about the role of F-2,6-BP in regulating PFK-1 activity? Allosteric effector site is far removed from the catalytic site and in fact maps to the interface between two PFK-1 subunits. ATP binds with equal affinity to the catalytic site regardless of the T or R state conformation of PFK-1 ATP binding to the allosteric effector site is highest when the protein is in the T state which functions to decrease fructose-6-P binding to the catalytic site AMP binding to the allosteric effector site serves to stabilize the R state, and thereby stimulates the production of fructose-1,6-BP by ATP-mediated phosphoryl transfer Phosphofructokinase-2 is also regulated The main regulatory protein is PFK-1. Why would this be? The last one down here is also involved in regulating glycolysis Two Isoforms of Pyruvate kinase L form in liver M form in muscle and brain Only L-form is regulated by phosphorylation Triggered by glucagon signaling pathway. Both forms allosterically regulated Why is alanine an allosteric regulator? Glycolysis and Gluconeogenesis are Reciprocally Regulated Supply and Demand of Glycolytic Intermediates Glucose isn’t the only sugar! • • • Maltose & β-amylase Sucrose & Sucrase Lactose & Lactase (don’t confuse with lactic acid!) All can enter glycolysis So can glycerol Fructose, galactose and glycerol enter the glycolytic pathway through a variety of routes, many of which require additional enzymatic reactions Fructose metabolism in the liver Fructokinase Fructose ATP Fructose-1-P Aldolase B ADP Glyceraldehyde + Dihydroxyacetone phosphate Glyceraldehyde Kinase GLYCOLYSIS +ATP TIM 2 Glyceraldehyde-3-P (GAP) Net 2 ATP ← +4 ATP Medical Implications of Alternative Sugars • • • High fructose corn syrup is the most common added sweetener to processed foods, however, for individuals with a genetic disease called fructose intolerance, fructose in the diet can be extremely toxic. Fructose intolerance is due to deficiencies in the enzyme fructose-1-P aldolase, also called aldolase B. People with fructose intolerance cannot eat foods containing fructose because it leads to the build-up of fructose-1-P which has no alternate metabolic fates in the absence of fructose-1-P aldolase. Galactose metabolism in the liver Galactose ATP Galactokinase ADP Galactose-1-P UDP-Glucose Uridyl transferase Glucose-1-P UDP-Galactose Epimerase UDP-Glucose Phosphoglucomutase Glucose-6-P GLYCOLYSIS Glycolytic intermediates serve important roles in anabolic pathways by providing carbon skeletons for biosynthesis Metabolic Fate of Pyruvate 1. Under aerobic conditions, the majority of pyruvate is metabolized in the mitochondria to acetyl CoA, and ultimately to CO2 and H2O which are the products of the citrate cycle and electron transport chain. 2. Under anaerobic conditions, such as occurs in muscle cells during strenuous exercise, or in erythrocytes which lack mitochondria, pyruvate is converted to lactate (the ionized form of lactic acid) by the enzyme lactate dehydrogenase. 3. The third fate of pyruvate occurs in microorganisms such as yeast which utilize alcoholic fermentation to convert pyruvate to CO2 and ethanol using the enzymes pyruvate decarboxylase and alcohol dehydrogenase, respectively. Glyceraldehyde-3-P NAD+ + Pi NADH + H+ Glyceraldehyde-3-P dehydrogenase Anaerobic Regeneration of NAD+ 3-Pglycerate 1,3-BisPglycerate ADP Pglycerate ATP kinase Phosphoglycerol mutase Enolase Phosphoenolpyruvate 2-Pglycerate ADP Pyruvate kinase NAD+ Lactate NADH + H+ ATP Pyruvate Lactate dehydrogenase Medical Implications of Lactate Dehydrogenase Deficiency (LDHA) • Defect in Lactate Dehydrogenase • These patients cannot maintain moderate levels of exercise due to an inability to utilize glycolysis to produce ATP needed for muscle contraction under anaerobic conditions.