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Genetics BOE approved April 15, 2010 Learner Objective: Cells go through a natural progression of events to produce new cells. A. Cellular organelles work together to perform a specific function. B. The cell cycle regulates cells during development, growth, and repair. C. Errors in the cell cycle can lead to cancer. D. All cells in the human body descend from stem cells. • Describe how the organelles work together to coordinate basic life functions. • Differentiate between different stages of the cell cycle. • Demonstrate the process of mitosis. • Predict changes that would result from errors at any checkpoint in the cell cycle. • Differentiate between pluripotent, totipotent, and progenitor cells. • Explain how microarrays are used to diagnose and treat cancer. • Identify checkpoint genes in the cell cycle that if mutated can cause cancer. • Compare cancer cells with non-cancerous cells. • Compare how oncogenes and tumor-suppressor genes cause cancer. Learner Objective: Organisms progress through a series of stages as they grow and develop. A. The male and female reproductive systems include paired gonads and networks of tubes in which sperm and oocytes are manufactured. B. Meiosis is a form of cell division that has the two genomes of a somatic cell to produce haploid gametes. C. Nearly all human prenatal development occurs during the first eight weeks; during the remaining months of gestation structures grow and specialize. D. The type of birth defect is dependent upon which structures were forming at the time of environmental exposure. • Trace the path of development of a spermatogonia and oogonia through the reproductive tract. • Describe the two events in meiosis, independent assortment and crossing over, which cause genetic variation. • Differentiate between oogenesis and spermatogenesis. • Model all steps of meiosis. • Identify the major stages and events of embryonic and fetal development. • Differentiate between the formation of monozygotic and dizygotic twins. Identify environmental agents that have an effect on human development. Learner Objective: Traits in living things are encoded in molecules of DNA. A. The work of many scientists led to the characterization of the structure and function of the DNA molecule B. DNA is an alpha helix that resembles a ladder with sugar-phosphate rails and nitrogen base rungs. C. DNA is made up of monomers called nucleotides; these are made of a five carbon sugar, a phosphate group, and a nitrogen containing base. D. DNA can be separated and analyzed using agarose gel electrophoresis. E. DNA makes exact copies of itself in a process called DNA replication during interphase of the cell cycle. FHSD Academics SAL 1 Genetics BOE approved April 15-2010 • Describe and identify the levels of DNA coiling, including: chromatin, histones, nucleosomes. • Compare and contrast: semiconservative, conservative, and dispersive models of DNA replication. • Outline and diagram the steps in DNA replication. • Identify the job of each of the following enzymes: helicase, binding proteins, primase, DNA • • • • • • polymerase, ligase. Build a model of DNA structure and label each of the following terms: 3’, 5’ ends nucleotide deoxyribose sugar phosphate nitrogenous base (adenine, thymine, cytosine, guanine) leading strand lagging strand hydrogen bond Okazaki fragment replication fork Distinguish purines from pyrimidines. Describe experiments that contributed to present day knowledge of the structure of DNA. Extract DNA from biological tissue, cut it into fragments using restriction enzymes, and analyze the DNA fragments with the use of gel electrophoresis. Select and correctly use the appropriate sized micropipette for a specific task. Learner Objective: Proteins are synthesized from genes and have a specific structure and function in organisms. A. The central dogma states that DNA is transcribed into RNA and translated into a protein which is observed as the organism’s phenotype. B. The function of a protein is dependent on its shape. C. Proteins have different levels of structural organization. D. Proteins can be separated and analyzed using polyacrylamide gel electrophoresis. • • • • • • • • • • Explain the “central dogma” of DNA. Compare and contrast DNA with RNA; give the function and structure for each type of RNA. Describe and diagram the processes of transcription and translation. Explain control of gene expression by operons and transcription factors. Distinguish between introns and exons. Describe RNA processing. Discuss the function of chaperone proteins. Model the primary, secondary, tertiary and quaternary structure of a protein. Demonstrate how certain properties can cause a protein to fold into its proper shape. Extract proteins from biological samples and analyze the proteins using polyacrylamide gel electrophoresis. Learner Objective: A cell transcribes and translates only a subset of its genome. A. Gene expression is evident at several levels, from molecular to the development of an organ or gland, to sweeping changes over a lifetime. B. RNAi causes disruptions in normal transcription. FHSD Academics SAL 2 Genetics BOE approved April 15-2010 C. The “central dogma” of DNA-encoding-RNA- encoding protein is only a small part of the story in the human genome. D. A mutation changes a gene’s sequence, which may or may not disrupt the encoded protein in a way that causes a mutant phenotype. E. DNA replication is routinely checked for errors and the damage is repaired. • • • • • • • Identify why gene regulation is necessary. Describe how RNAi can be used to regulate gene expression. Describe chromatin remodeling. Illustrate how 25,000 genes encode 200,000 proteins, using exon shuffling. Describe how the genetic code protects against mutation. Differentiate between the different types of gene mutations. Differentiate between the different methods of DNA repair. Learner Objective: Traits are inherited in predictable patterns. A. Modes of inheritance reveal whether a Mendelian trait is dominant or recessive and whether the gene that controls it is carried on an autosome or a sex chromosome. B. A Mendelian trait is caused by a single gene. C. Monohybrid and dihybrid crosses yield predictable inheritance of genes D. Variations in gene expression and in allele and gene interactions can alter expected Mendelian phenotypic ratios. E. The human genome is much more complicated and has revealed “exceptions” to the rules of Mendelian inheritance. F. Linked genes are inherited in patterns that differ from Mendelian inheritance and can be used to map genes on chromosomes. • • • • • • • Deduct, given clues, the inheritance patterns of traits inherited via autosomal dominant or autosomal recessive inheritance. Use a Punnett Square to calculate the probability that a particular couple will have a child who will inherit a particular condition. Recognize the genotype of an organism as homozygous or heterozygous; recessive or dominant. Relate meiosis to Mendel’s two laws. Interpret a pedigree and predict inheritance patterns in a family. Recognize how various phenomena can disrupt Mendelian phenotypic ratios. Identify causes of particular disorders (i.e. CF, Marfans’s, Huntington’s, Tay Sachs, albinism) Learner Objective: Determination of the phenotype requires interactions with many genes and the environment. A. Sexual identity is guided by genes, hormones, feelings, and experiences. B. Genes on the sex chromosomes (sex-linked) have unique inheritance patterns. C. Some genes-autosomal as well as X- or Y- linked- are expressed in one sex but not the other, or may be inherited as a dominant trait in one but a recessive in the other. D. Genes and environment affect many human traits. E. Polygenic traits are determined by more than gene and vary continuously in expression. F. Geneticists evaluate the input of genes, using information from population and family FHSD Academics SAL 3 Genetics BOE approved April 15-2010 • • • • • • • studies. Differentiate between prenatal male and female patterns of sexual development. Differentiate between the cell types and hormones that contribute to the development of male and female reproductive structures. Map the chromosomal regions on the Y chromosome and differentiate between the pseudosutosomal region genes and the male-specific region genes. Analyze a pedigree and determine the inheritance patterns for sex-linked genes. Compare a Mendelian multifactorial trait and a polygenic multifactorial trait. Describe several ways to assess the influence of heredity and the environment. Compare and contrast the types of information gained from studies of adopted individuals and twin studies. Learner Objective: Chromosomal patterns have an effect on the phenotype of an organism. A. A chromosome includes DNA and the proteins that allow DNA to be replicated. B. The 24 chromosomes in a human cell are distinguished by size, shape, staining pattern and DNA sequence. C. Extra sets of chromosomes, or missing or extra individual chromosomes, can devastate health. D. Disruption in the precise sequence of events that occurs during meiosis can result in chromosomes with missing or extra genetic material or that exchange parts. • Differentiate between the three techniques used to obtain fetal cells and observe their chromosomes. (C2b; B) • Describe the different parts of a chromosome. • Describe how chromosomes are made visible. • Diagnosis a genetic disorder using a karyotype. • Explain how chromosomes are organized and analyzed. • Analyze chromosomal shorthand. • Distinguish between various aneuploid disorders. • Describe the different types of chromosomal mutations. Learner Objective: Gene frequencies can change over time and affect populations. A. Population genetics considers allele, genotype, and phenotype frequencies to determine whether microevolution is occurring. B. In Hardy-Weinberg equilibrium, no allele frequencies change, thus no evolution is currently occurring. • List and explain the five factors that would cause gene frequencies to change over time. • Discuss instances of microevolution in human history for each of Hardy- Weinberg’s five factors. • Use the Hardy-Weinberg equation to determine the frequency of each allele in a population and the frequency of each phenotype in a population. • Describe the effects of inbreeding in genotypic terms. Learner Objective: Organisms can be genetically modified for various human purposes. A. Biotechnology has produced organisms with combinations of traits that would probably not have arisen in nature. B. Organisms with DNA from other species produce novel proteins or carry out processes more efficiently or in different ways. C. Designing a gene therapy requires the creative combining of genetic material. D. Genetic counselors combine scientific, medical, communication, and psychological skills FHSD Academics SAL 4 Genetics BOE approved April 15-2010 to educate people facing the possibility of inherited illnesses. • Describe how biotechnology has been used to create everyday items in their lives. • Describe the process required to make a recombinant DNA molecule. , • Predict the outcome of a transgenic experiment. • Summarize the pros and cons of genetically modifying foods. • Describe how gene targeting has helped to perfect gene therapy. • Differentiate between “knockout” and “knockin” genes. • Trace the development of gene therapies from 1990 to present. Differentiate between the different types of gene therapy (ex vivo, in vivo, in vitro). FHSD Academics SAL 5 Genetics BOE approved April 15-2010