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Chapter 4 Cell Structure and Function Sections 1-6 Albia Dugger • Miami Dade College 4.1 Food For Thought • E. coli O157:H7A, strain of bacteria that causes severe illness or death, occasionally contaminates foods such as ground beef and fresh vegetables • Outbreaks, which occur with disturbing regularity, also have severe economic impacts • Food growers and processors are now using procedures that they hope will reduce E. coli O157:H7 outbreaks E. coli O157:H7 4.2 Cell Structure • The cell is the smallest unit that shows the properties of life • All cells have a plasma membrane and cytoplasm, and all start out life with DNA Components of All Cells • Plasma membrane • Controls substances passing in and out of the cell • DNA containing region • Nucleus in eukaryotic cells • Nucleoid region in prokaryotic cells • Cytoplasm • A semifluid mixture containing cell components Organelles • Organelles are structures that carry out special metabolic functions inside a cell Prokaryotic and Eukaryotic Cells • Eukaryotic cell • Cell interior is divided into functional compartments, including a nucleus • Prokaryotic cell • Small, simple cells without a nucleus A A prokaryotic cell. cytoplasm DNA plasma membrane nucleus B A eukaryotic (plant) cell. Only eukaryotic cells have a nucleus. Figure 4-2 p54 Preview of Cell Membranes • Lipid bilayer • A double layer of phospholipids organized with their hydrophilic heads outwards and their hydrophobic tails inwards • Many types of proteins embedded or attached to the bilayer carry out membrane functions cell’s exterior plasma membrane cell’s interior Figure 4-3 p54 Constraints on Cell Size • Surface-to-volume ratio restricts cell size by limiting transport of nutrients and wastes The Cell Theory Emerges • Van Leeuwenhoek was the first to describe small organisms seen through a microscope • Hooke was the first to sketch and name cells • Brown was the first to identify a cell nucleus Cell Theory • The cell theory, a foundation of modern biology, states that cells are the fundamental units of life • • • • All organisms consists of one or more cells A cell is the smallest unit with the properties of life Each new cell arises from division of a preexisting cell Each cell passes its hereditary material to its offspring Take-Home Message: How are all cells alike? • All cells start life with a plasma membrane, cytoplasm, and a region of DNA, which, in eukaryotic cells only, is enclosed by a nucleus • The surface-to-volume ratio limits cell size and influences cell shape • Observations of cells led to the cell theory: All organisms consist of one or more cells; the cell is the smallest unit of life; each new cell arises from another cell; and a cell passes hereditary material to its offspring 4.3 How Do We See Cells? Table 4-1 p56 Modern Microscopes • Light microscopes • Phase-contrast microscopes • Reflected light microscopes • Fluorescence microscopes • Electron microscopes • Transmission electron microscopes • Scanning electron microscopes path of light rays (bottom to top) to eye prism that directs rays to ocular lens ocular lens objective lenses specimen stage condenser lens illuminator focusing knob light source (in base) Figure 4-5a p56 incoming electron beam condenser lens specimen on grid objective lens projective lens phosphor screen Figure 4-5b p56 ANIMATED FIGURE: How a light microscope works To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE Different Microscopes, Different Characteristics Relative Sizes human eye (no microscope) largest organisms 100 m 10 m small animals 1m 10 cm 1 cm frog eggs 1 mm 100 µm Relative Sizes electron microscopes light microscopes most eukaryotic cells most bacteria mitochondria, chloroplasts viruses molecules of life DNA small molecules carbohydrates proteins lipids 10 µm 1 µm 100 nm 10 nm 1 nm 0.1 nm Relative Sizes Learn.genetice.utah.edu Take-Home Message: How do we see cells? • Most cells are visible only with the help of microscopes • Different types of microscopes reveal different aspects of cell structure 4.4 Introducing “Prokaryotes” • Bacteria and archaea are the prokaryotes (“before the nucleus”), the smallest and most metabolically diverse forms of life • Bacteria and archaea are similar in appearance and size, but differ in structure and metabolism General Prokaryote Body Plan • Cell wall surrounds the plasma membrane • Made of peptidoglycan (in bacteria) or proteins (in archaea) and coated with a sticky capsule • Flagellum for motion • Pili help cells move across surfaces • “Sex” pilus aids in sexual reproduction General Prokaryote Body Plan • Ribosomes • Organelles upon which polypeptides are assembled • Nucleoid • An irregularly shaped region of cytoplasm containing a single, circular DNA molecule • Plasmids • Small circles of DNA carry a few genes that can provide advantages, such as resistance to antibiotics General Prokaryote Body Plan 7 1 cytoplasm, with ribosomes plasma membrane 3 2 DNA in nucleoid 5 4 capsule cell wall 6 pilus flagellum ANIMATED FIGURE: Typical prokaryotic cell To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE Bacteria Archaeans Biofilms • Although prokaryotes are all single-celled, few live alone • Biofilm • Single-celled organisms sharing a secreted layer of polysaccharides and glycoproteins • May include bacteria, algae, fungi, protists, and archaeans Dental Plaque: A Biofilm Take-Home Message: How are bacteria and archaea alike? • Bacteria and archaea do not have a nucleus. Most kinds have a cell wall around their plasma membrane; the permeable wall reinforces and imparts shape to the cell body • The structure of bacteria and archaea is relatively simple, but as a group these organisms are the most diverse forms of life; they inhabit nearly all regions of the biosphere • Some metabolic processes occur at the plasma membrane of bacteria and archaea; they are similar to complex processes that occur at certain internal membranes of eukaryotic cells 4.5 Introducing Eukaryotic Cells • All protists, fungi, plants, and animals are eukaryotes • Eukaryotic (“true nucleus”) cells carry out much of their metabolism inside membrane-enclosed organelles • Organelle • A structure that carries out a specialized function within a cell Components of Eukaryotic Cells Components of Eukaryotic Cells Cell Central Wall Chloroplast Vacuole Cytoskeleton microtubules microfilaments intermediate filaments (not shown) Mitochondrion Plasmodesma nuclear envelope nucleolus DNA in nucleoplasm Nucleus Ribosomes Rough ER Smooth ER Golgi Body Plasma Membrane Lysosome-Like Vesicle Figure 4-12a p61 3D ANIMATION: Tour of an Animal Cell Inner life of cell vacuole cell wall central vacuole plasma membrane chloroplast mitochondrion nucleus B Photosynthetic cell from a blade of timothy grass. Figure 4-11b p60 Rough ER Modifies proteins made by ribosomes attached to it Smooth ER Makes lipids, breaks down carbohydrates and fats, inactivates toxins Golgi Body Finishes, sorts, ships lipids, enzymes, and proteins Lysosome Digests, recycles materials Stepped Art p64 vacuole plasma membrane mitochondrion nucleus A Human white blood cell. Figure 4-11a p60 Take-Home Message: What do eukaryotic cells have in common? • All eukaryotic cells start life with a nucleus and other membrane-enclosed organelles ANIMATION: Common eukaryotic organelles To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE 4.6 The Nucleus • All of a eukaryotic cell’s DNA is in its nucleus • The nucleus keeps eukaryotic DNA away from potentially damaging reactions in the cytoplasm • The nuclear envelope controls when DNA is accessed Table 4-2 p60 nuclear envelope DNA nucleolus nuclear pore nucleoplasm cytoplasm ER Figure 4-13a p62 nuclear envelope DNA nucleolus nuclear pore nucleoplasm cytoplasm ER Figure 4-13b p62 The Nuclear Envelope • Nuclear envelope • Two lipid bilayers pressed together as a single membrane surrounding the nucleus • Outer bilayer is continuous with the ER • Nuclear pores Structure of the Nuclear Envelope B Each nuclear pore is an organized cluster of membrane proteins that selectively allows certain substances to cross it on their way into and out of the nucleus. nuclear pore A The outer surface of this nuclear envelope was split apart to reveal the pores that span the two lipid bilayers. Figure 4-14ab p63 nuclear pore nuclear envelope (two lipid bilayers) cytoplasm Figure 4-14b p63 ANIMATED FIGURE: Nuclear envelope To play movie you must be in Slide Show Mode PC Users: Please wait for content to load, then click to play Mac Users: CLICK HERE The Nucleoplasm and Nucleolus • Nucleoplasm • Viscous fluid inside the nuclear envelope, similar to cytoplasm • Nucleolus • A dense region in the nucleus where subunits of ribosomes are assembled from proteins and RNA Chromosomes • Chromatin • All DNA and its associated proteins in the nucleus • Chromosome • A single DNA molecule with its attached proteins • During cell division, chromosomes condense and become visible in micrographs • Human body cells have 46 chromosomes A Condensed Chromosome Take-Home Message: What is the function of the cell nucleus? • A nucleus protects and controls access to a eukaryotic cell’s DNA • The nuclear envelope is a double lipid bilayer. Proteins embedded in it control the passage of molecules between the nucleus and the cytoplasm