Download Adaptive Radiation and Macroevolution in the Hawaiian Silverswords

Adaptive Radiation and Macroevolution
in the Hawaiian Silverswords
http://www.botany.hawaii.edu/faculty/carr/silversword.htm
The Hawaiian Silverswords exhibit enormous
phenotypic variation (from herbs to trees to vines)..,
(photos from http://www.botany.hawaii.edu/faculty/carr/silversword.htm)
…yet they have high genetic identity
(http://www.botany.hawaii.edu/faculty/carr/silversword.htm)
• Despite tremendous
morphological and
ecological variation
among species of the
Hawaiian silversword
alliance, genetic identities
of species pairs based on
electrophoretic studies
are often very high
(I=0.95-1.00),
comparable to genetic
distances between
populations of a single
species in continental
plants.
Where Did The Silverswords Come From?
• The Hawaiian Islands are
much younger than the
continents that form the
Pacific Rim
• Construct a phylogeny
that includes the
Silverswords and all their
relatives, and determine
which lineages are their
nearest relatives
Silversword Phylogeny 1
• A phylogeny based
on Choroplast DNA
suggests that the
North American
Tarweeds are the
nearest relatives to
the Hawaiian
Silverswords
(Baldwin et al 1991)
Silversword Phylogeny 2
•
•
A phylogeny based on Nuclear
Ribosomal DNA also points to
the North American Tarweeds
as the nearest relatives to the
Hawaiian Silverswords
Using an assumption of a
molecular clock, the
Silversword radiation is dated
to have begun about 5.2 ± 0.8
million years ago. Kauai, the
oldest island, has been
geologically dated to 5.1 ± 0.2
million years old.
(Baldwin & Sanderson 1998)
Silversword Phylogenies 3 & 4
• Two regulatory gene trees based on ASAP3/TM6 and on
ASAP1 also point to the Tarweeds as the nearest
Relatives to the Silverswords (Barrier et al 2001)
North American Tarweeds
(http://www.botany.hawaii.edu/faculty/carr/silversword.htm)
• These are all small herbaceous plants that lack
the phenotypic diversity of the Hawaiian
Silverswords
How did Tarweed like ancestors
give rise to Silversword diversity?
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Gene Duplication And Macroevolution
•
•
Susumu Ohno (1970) noticed
that episodes of major
evolutionary change (e.g. new
structures, adaptive radiations)
are often preceded by
episodes of gene or genome
duplication, and hypothesized
a connection between the two.
Ding et al (2006) reported a
significant correlation between
Number of Cell Types (a
measure of complexity or past
macroevolution) and gene
duplication events, inferred
from the fossil record.
Gene Duplication Theory
• Neofunctionalization:
– One copy of a duplicate
gene is under selection to
retain its original function,
and the other copy is free
to evolve a new function
– If this process occurs in
regulatory genes, then this
could lead to the evolution
of new developmental
pathways and new
bauplans
Gene
duplication
Copy1
Copy2
selection
Retains
Original
Function
Evolves
New
Function
Gene Duplication Theory
• Subfunctionalization:
– Regulatory genes often
have multiple functions
(pleiotropy). A variation on
the gene duplication
hypothesis is that duplicate
copies may each evolve to
partition the functions of
the original gene into
discrete subfunctions, and
thus allow subsequent
independent evolution
among subfunctions.
– May be a bridge to
neofunctionalization.
Gene AB
duplication
Copy1 AB
Copy2 AB
Loses Function A
Retains Function B
Copy2 AB
Loses Function B
Retains Function A
Subfunctionalization of an
engrailed gene in zebrafish
• In mouse, En1
expresses in both
pectoral limb buds
and the hindbrain.
• In zebrafish, eng1
expresses in pectoral
limb buds, and eng1b
expresses in the
hindbrain (Force et al
1999).
Evidence for Genome Duplication
in the Silverswords
•
Twice the Chromosomes:
http://www.botany.hawaii.edu/faculty/carr/silversword.htm
– Silverswords have roughly
twice the chromosome
number as Tarweeds, which
suggests they’re tetraploids
•
Duplicate Genes:
(Barrier et al 1999, 2001)
– Two regulatory genes,
ASAP3/TM6 and ASAP1, and
one structural gene, ASCAB9,
exist as single copies in the
Tarweeds, but as duplicate
copies in the Silverswords.
Evidence for Allotetraploid Hybrid
Origin for the Silverswords
• Preceding evidence for
genome duplication
• Two particular
tarweeds, R. muirii and
R. scabrida,
consistently appear in
phylogenies as the
nearest relatives to the
Silverswords
Evidence for Allotetraploid Hybrid
Origin for the Silverswords
(Barrier et al 1999, 2001)
• One Silversword copy of
regulatory gene,
ASAP3/TM6-A, shows
R.scabrida to be the
nearest Tarweed relative
to the Silverswords.
• The other copy,
ASAP3/TM6-B, shows
R.muirii to be the nearest
Tarweed relative to the
Silverswords
The Silverswords Evolved More
Rapidly Than The Tarweeds
(Barrier et al 2001)
Point Mutations
Nonsynonymous
Synonymous
Regulatory Genes
ASAP3/TM6
ASAP1
Hawaiian
North American
Hawaiian
North American
Silverswords
Tarweeds
Silverswords
Tarweeds
25
5
28
50
15
31
11
64
Structural Gene
ASCAB9
Hawaiian
North American
Silverswords
Tarweeds
7
3
9
31
• Hawaiian Silverswords vs North American Tarweeds
– All 3 genes accumulated relatively more nonsynonymous point
mutations in the Silverswords than in the Tarweeds
• Regulatory vs Structural Genes
– Within the Silverswords, the Regulatory Genes accumulated
relatively more nonsynonymous point mutations than the
Structural Gene
What do we know about the developmental
genetics of ASAP3/TM6 and ASAP1?
• Lawton-Rauch et al 2003,
compared partial sequences
for both genes for several
individuals from 2 silversword
species from 2 genera and 2
islands
– Argyroxiphium
sandwicense ssp.
macrocephalum (above),
from Maui
– Dubautia ciliolata ssp.
glutinosa (below) from
Hawaii
What do we know about the developmental
genetics of ASAP3/TM6 and ASAP1?
• Both genes showed
interspecific differences in
haplotype
• Dubautia ciliolata showed
intraspecific differences
between the two copies of
ASAP3/TM6
The data are consistent with the hypothesis of
genome duplication, eventual neofunctionalization,
and rapid regulatory gene evolution.
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