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Genetic polymorphisms among C57BL/6 mouse inbred strains
Genetic polymorphisms among C57BL/6 mouse inbred strains

... examining the genotype because of the possible effects on phenotype. Thus, knockout and transgenic mice produced in C57BL/6J and C57BL/6N inbred substrains might co-exist in a given animal house and, therefore great care should be taken to accurately monitor the genotypes of mouse colonies or when a ...
Genes Involved in the Uptake and Catabolism of
Genes Involved in the Uptake and Catabolism of

... colonies. They were found to be still devoid of PEP-carboxylase activity, and would therefore not grow on any hexose or other substrate which requires this anaplerotic enzyme for catabolism, until theppc+ allele had been introduced. This was done by infecting suspensions of the organisms with phage ...
Genes Involved in the Uptake and Catabolism of
Genes Involved in the Uptake and Catabolism of

... colonies. They were found to be still devoid of PEP-carboxylase activity, and would therefore not grow on any hexose or other substrate which requires this anaplerotic enzyme for catabolism, until theppc+ allele had been introduced. This was done by infecting suspensions of the organisms with phage ...
VAAST 2 User`s Guide
VAAST 2 User`s Guide

... annotating  genomic  features.    Although  various  versions  of  GTF  and  GFF  formats   have  been  in  use  for  many  years,  GFF3  was  introduced  by  Lincoln  Stein  to   standardize  the  various  gene  annotation  formats  to ...
The yeast Sup35 protein is a translation termination factor with the
The yeast Sup35 protein is a translation termination factor with the

... text. Similar results were obtained in other strain backgrounds. For example, in the strain 74-D694, [PSI+] confers resistance to 10mM caffeine (Supplementary Fig. 2a, center). Creating [PSI+]-like levels of nonsense suppression in the [psi-] derivative by replacing the wild-type SUP35 gene with the ...
Asymmetries in Retrieval of Gene Function Information
Asymmetries in Retrieval of Gene Function Information

... of the source followed by a slash followed by an accession number and can be searched with one or both components, e.g., genbank [si], AF001892 [si], genbank/AF001892 [si]. The SI field and the Entrez sequence database links are not linked. The PubMed links to these databases are created from the re ...
Neurospora Spore Killers Sk-2 and Sk
Neurospora Spore Killers Sk-2 and Sk

... located within the recombination block region, while mod(pr) is located just outside of it (Figure 1). We are interested in another seemingly unrelated ascus-dominant phenomenon called meiotic silencing by unpaired DNA (MSUD). If a copy of a gene is not properly paired with its homolog during propha ...
Current Trends of Emergence and Spread of Vancomycin
Current Trends of Emergence and Spread of Vancomycin

... Enterococci are intestinal colonizers in many mammals including man, birds, reptiles and even invertebrates and are also found in diverse environments such as sewage, soil and water. They have been used for decades for food fermentation and preservation due to their metabolic properties and their ca ...
Chapter 7 - Research Explorer
Chapter 7 - Research Explorer

... KH is the solubility constant of CO2 gas in water, and pCO2 is the partial pressure of CO2 in the atmosphere. If it is assumed that the dense cyanobacterial bloom has stripped the surface layer of CO2(aq), this equation simplifies to gCO2 = v KH pCO2. The gas transfer velocity depends on several par ...
Attachment 2.2 Sequencing results
Attachment 2.2 Sequencing results

... On the other hand, AHR deficient mice have a reduced body weight, display reduced fecundity and are defective in development of both liver and immune system. In these mice fetal vascular structures are found in the eyes, kidneys and liver. [1] Objective: to study the conservation of the AHR gene and ...
Wolbachia: master manipulators of invertebrate biology
Wolbachia: master manipulators of invertebrate biology

... high number of mobile and repetitive elements. Repeats make up more than 14% of the wmel genome, which in the Rickettsiales is second only to Orientia tsutsugamushi. A high number of these repeats are represented by ankyrin (ANK) domains, which are common among eukaryotes but unusual in bacteria, in ...
Regular Papers - Fungal Genetics Stock Center
Regular Papers - Fungal Genetics Stock Center

... In Neurospora crassa the comple x translo cation, T(IIIR -> X; IIIR; VIL) D305 (also referred to as T(D305)) translocates a LG IIIR segment into another unide ntified chromosome (P erkins 1 997 Adv . Gen et. 36: 239 -397 ). W hen this translocation is crossed by normal sequence some of the progeny a ...
as Adobe PDF - Edinburgh Research Explorer
as Adobe PDF - Edinburgh Research Explorer

... currently too few characterized target genes and CRMs known to make accurate models about Biniou’s direct regulatory role; only three direct target genes have been identified to date. Biniou provides positive feedback regulation to bagpipe during trunk VM specification (Zaffran et al. 2001). The two ...
PROGRAM PROGRAM
PROGRAM PROGRAM

... • Novel candidates for host response to BLV infection in Holstein cattle based on genome-wide association study (P. Brym) – 12 min • Comparing gene expression profiles in the mammary glands of high- and low-milkyield Holstein Friesian cows (M. Miller) – 12 min • Association between polymorphisms ...
Assessing the role of anammox in a nitrogen contaminated aquifer
Assessing the role of anammox in a nitrogen contaminated aquifer

... Although nitrogen makes up 78% of our atmosphere, most is unavailable to organisms due to the strong triple bond that holds the two N atoms together. In order to be able to utilize this N, it must be fixed. N fixation can either occur abiotically by lightning or biologically by certain microorganis ...
MINI - REVIEW Turner. B.C., D.D. Perkins
MINI - REVIEW Turner. B.C., D.D. Perkins

... A similar Spore killer, Sk-1^K, has been found in N. sitophila. Sk-1^K differs from Sk-2^K and Sk-3^K by showing 5% second-division segregation. Sk-1^K and Sk-1^S are about equally frequent in wild-collected N. sitophila from many parts of the world. No neutral strain has been found. Attempts to int ...
To on your computer
To on your computer

... ATTED http://atted.jp/ A simple site to use to look for co-expression patterns in Arabidopsis; it shows gene networks, not just lists of correlated genes. COEXPRESdb http://coxpresdb.jp Co-expression in yeasts and animals. COXPRESdb provides data for both S. cerevisiae and S. pombe, while Golm does ...
Environmental Microbiology Reports
Environmental Microbiology Reports

... Rhizobium and Bradyrhizobium). This suggests that rhizobia can express nifH genes in association in sugarcane and thus, they may be of quantitative importance during sugarcane-associated BNF. In accordance with this observation, the isolation of (fast-growing) Rhizobium spp. isolates from sugarcane ...
Ret/PTC3 is the most frequent form of gene rearrangement
Ret/PTC3 is the most frequent form of gene rearrangement

... Kitamura et al. 1997). Somatic missense mutations of the RET gene are found in sporadic medullary thyroid carcinomas as well (Hofstra et al. 1994; Kitamura et al. 1997). The loss of heterozygosity (LOH) in specific chromosomal regions that is frequently detected in follicular (Tung et al. 1997) and ...
Specificity of Insertion by the Translocatable Tetracycline Resistance Element Tn10.
Specificity of Insertion by the Translocatable Tetracycline Resistance Element Tn10.

... mapping places an upper limit of about 50 basepairs on the distance between different insertions within a cluster. Different insertions within a cluster usually have the same reversion frequency; however, heterogeneity in reversion frequency has been detected in at least two clusters. For most clust ...
Student Study Outline Ch24
Student Study Outline Ch24

... it can detect _______________________________________________________ . (Outcome 24.6.14) 5. Fetal cell sorting is _____________________________ and it can detect _______________________________________________________ . VII. Genetics and Personalized Medicine Outcome 24.7.15) A. People may have the ...
Rapid Microscope Based Identification Method for Tuberculosis and
Rapid Microscope Based Identification Method for Tuberculosis and

... identification of different species of microorganisms without prior cultivation. This technique (oligonucleotide FISH) was then further developed and applied by Amann et al in the early 1990s on a variety of environmental samples [30]. Some of the first oligonucleotide FISH applications on medical s ...
Periplasmic adaptor protein AcrA has a distinct
Periplasmic adaptor protein AcrA has a distinct

Biochemistry of coenzyme B12‐dependent glycerol and diol
Biochemistry of coenzyme B12‐dependent glycerol and diol

... homologs is to encase diol dehydratase within a polyhedral shell. Thus far, four homologs of carboxysome shell protein genes have been identi¢ed in the pdu operon [40]. Electron microscopy showed that S. enterica forms polyhedral bodies during growth on 1,2-propanediol, and immuno-electron microscop ...
Control of DNA excision efficiency in Paramecium
Control of DNA excision efficiency in Paramecium

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Pathogenomics

Pathogen infections are among the leading causes of infirmity and mortality among humans and other animals in the world. Until recently, it has been difficult to compile information to understand the generation of pathogen virulence factors as well as pathogen behaviour in a host environment. The study of Pathogenomics attempts to utilize genomic and metagenomics data gathered from high through-put technologies (e.g. sequencing or DNA microarrays), to understand microbe diversity and interaction as well as host-microbe interactions involved in disease states. The bulk of pathogenomics research concerns itself with pathogens that affect human health; however, studies also exist for plant and animal infecting microbes.
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