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Chapter 3: Cells A. Cells are the units of life • All organisms consist of cells • Cells are the smallest unit of life that can function independently • 1660 – Robert Hooke first person to see outlines of cells (in cork) • 1673 – Antony van Leeuwenhoek improved lenses and drew observations • 1830’s – Robert Brown identified the nucleus • Cell theory (est. ~ 1839) – 2 Main tenets (ideas) • All organisms are made of one or more cells • The Cell is the fundamental unit of life • Ideas developed by Schleiden and Schwann – 3rd Main tenet • All cells come from preexisting cells – Contradicts the idea of spontaneous generation • This idea was added in 1855 by Virchow • Microscopes are used to study cells – Light microscopes • Compound light microscope - glass lenses focus visible light, 0.2 µm resolution • Confocal microscope – enhanced resolution using white or laser light – Electron microscopes – greater magnification and better resolution but specimen must be dead • Transmission Electron Microscope (TEM) – uses beam of electrons focused by magnetic field • Scanning Electron Microscope (SEM) – scans beam of electrons over metal coated specimen – Scanning probe microscope – probe moves over surface giving exquisite detail • Features common to all cells – Genetic information, DNA – Proteins carry out cell’s work – RNA participates in producing proteins – Ribosomes manufacture proteins – Cytoplasm – Cell membrane • Complex cells also have organelles – compartments for specialized functions • Surface area to volume – All cells are small – Require large surface area – Surface area limitation on size of cell – May be avoided through • Flattened shape • Fingerlike extensions • Specialized organelles to improve efficiency (explains animal and plant cells being larger than bacterial cells) – Vacuoles in plant cells, etc. B. Cell membrane (separating the cell from the external environment and So much more!) • Composition of the cell membrane: – Made of lipids and proteins – Phospholipid • Glycerol and a phosphate group form head, 2 fatty acids form the tails • Head is hydrophilic, tails are hydrophobic • Together, phospholipids spontaneously form phospholipid bilayer, like a defense move for the tails! – Fluid mosaic – proteins and phospholipids free to move laterally within the bilayer – Proteins in the cell membrane: • Transport proteins • Enzymes • Recognition proteins • Adhesion proteins • Receptor proteins Functions of the Cell Membrane: • Signal transduction – A cell receives an external “message” and converts it into an internal signal – Receptor proteins bind to stimulus molecule, first messenger – Triggers chemical reaction whose product is second messenger – Second messenger provokes cell’s response – activating particular genes or enzymes C. Different cell types • Prokaryote – simplest and most ancient forms of life whose cells lack organelles • Eukaryotes – cells contain organelles • 3 domains of life – Bacteria – prokaryote – Archaea – prokaryote – Eukarya – eukaryote C. Different cell types • Domain Bacteria – Lack membrane bound nuclei – 1 circular DNA molecule found in nucleoid – Rigid cell wall in most – provides protection and shape – Some have capsule and flagella • Domain Archaea – Resemble bacteria superficially only – Phospholipids, cell walls, and flagella unique – Some are “extremophiles” • Burning Question: What IS the smallest certifiable living organism? See p. 59! C. Different cell types • Domain Eukarya – Huge diversity – Larger than prokaryotes – Internal membranes create internal compartments called organelles that are specialized for specific tasks in the cell – Endosymbiosis theory – maybe ancient organism engulfed another organism and rather than eating it, it stayed as a partner (supported by mitochondria and chloroplasts) – 2 Major groups of eukaryotic cells based on structure and functions: animal & plant cells D. Eukaryotic organelles • Organelles carry out coordinated interactions to meet the needs of an organism: Ex: Milk D. Eukaryotic organelles • Nucleus – Contains DNA – information specifying “recipe” for every protein a cell can make – Nuclear pores are holes in the nuclear envelope surrounding the nucleus, lets RNA and other substances through – Nucleolus - dark core in middle of nucleus; assembles ribosomes • Cytoplasm – Watery-jelloish soup of dissolved substances, organelles and cytoskeleton D. Eukaryotic organelles • Ribsomes – Site of protein synthesis – Found lose in cytoplasm or attached to ER • Endoplasmic Reticulum – Originates at nuclear membrane and winds throughout the cell – 2 types: • Rough ER – studded with ribosomes making proteins destined for secretion (like milk) – Proteins folded and modified • Smooth ER – synthesizes lipids, detoxifies drugs and poisons • Lipids and proteins made by ER exit in vesicles D. Eukaryotic organelles • Golgi apparatus – Processing center for vesicle contents – Proteins complete intricate folding and become functional – Some proteins will become membrane surface proteins – Others packaged for secretion from the cell D. Eukaryotic organelles • Lysosomes – Contain enzymes that lyse substrates – Specific pH inside lysosome prevents enzymes from damaging cell • Vacuoles – Found in plants – Enzymes degrade and recycle materials – Important in growth and maintaining rigidity • Peroxisomes – Dispose of toxic substances – Some reactions produce hydrogen peroxide (H2O2) – Enzyme produces harmless water molecules D. Eukaryotic organelles • Chloroplasts – – – – – Found in plant cells Site of photosynthesis Uses energy from sunlight to produce glucose Occurs specifically in thylakoids Endosymbiosis theory support – has its own DNA D. Eukaryotic organelles • Mitochondria – Cellular respiration extracts energy from food – Cristae – internal folds; contain enzymes for cellular respiration – Also contains its own DNA • Always inherited from mother in humans http://www.pbs.org/wgbh/nova/neanderthals/mtdna.html D. Eukaryotic organelles Cytoskeleton • 3 major components distinguished by protein type, diameter, and aggregation – Microtubules – Microfilaments – Intermediate filaments D. Eukaryotic organelles • Microtubule – Made of Tubulin protein – Forms very small hollow tubes – Can change length of tube by adding or removing tubulin molecules – “Trackway” within cell for many cellular movements – Cilia – short, many – Flagella – long, few D. Eukaryotic organelles • Microfilaments – Actin – Long, very thin rods – Machinery to move • Intermediate filaments – (10 nm) diameter is intermediate – Made of different proteins in different specialized cell types – Internal scaffold for cell E. Cells adhere and communicate • Cell walls – Surround cell membrane of nearly all bacteria, archaea, fungi, algae, and plants – Not just a barrier – Built of different components – Plasmodesmata connect adjacent cells – (like little bridges between cells) • Animal cell junctions – Animal cells lack cell walls – Secrete complex extracellular matrix – Intercellular junctions 1. Tight junctions form impermeable barriers 2. Anchoring or adhering junctions connect cells by linking intermediate filaments 3. Gap junctions link cytoplasm of adjacent cells http://www.cellsalive.com/cells/3dcell.htm http://learn.genetics.utah.edu/content/begin/cells/insideacell/ http://learn.genetics.utah.edu/content/begin/cells/scale/ http://www.wisc-online.com/objects/index_tj.asp?objID=ap11604