Survey
* Your assessment is very important for improving the workof artificial intelligence, which forms the content of this project
Download Steps to follow to obtain data required for using the
Document related concepts
Transposable element wikipedia , lookup
Oncogenomics wikipedia , lookup
Polycomb Group Proteins and Cancer wikipedia , lookup
Copy-number variation wikipedia , lookup
Vectors in gene therapy wikipedia , lookup
Human genome wikipedia , lookup
X-inactivation wikipedia , lookup
Genetic engineering wikipedia , lookup
Epigenetics of diabetes Type 2 wikipedia , lookup
Gene therapy wikipedia , lookup
Public health genomics wikipedia , lookup
Nutriepigenomics wikipedia , lookup
Ridge (biology) wikipedia , lookup
Genomic imprinting wikipedia , lookup
Biology and consumer behaviour wikipedia , lookup
History of genetic engineering wikipedia , lookup
Gene desert wikipedia , lookup
Gene nomenclature wikipedia , lookup
Therapeutic gene modulation wikipedia , lookup
Epigenetics of human development wikipedia , lookup
Helitron (biology) wikipedia , lookup
Gene expression programming wikipedia , lookup
Pathogenomics wikipedia , lookup
Genome editing wikipedia , lookup
Site-specific recombinase technology wikipedia , lookup
Gene expression profiling wikipedia , lookup
Genome (book) wikipedia , lookup
Artificial gene synthesis wikipedia , lookup
Minimal genome wikipedia , lookup
Microevolution wikipedia , lookup
Transcript
Steps to follow to obtain data required for using the Biomart_to_SyntenyTracker_format tool 1. Click on the “Martview” option in the biomart website (http://www.biomart.org/index.html). In the “choose database pull down” menu, please select “ENSEMBL 53 GENES (SANGER UK)” option. Another pull down menu, “choose database” appears. Please select a genes set of interest (reference genome) as shown below. 2. On the left side pane, click on the “Attributes” link. Of the options displayed on the central pane, choose “Homologs”. Expand the “Gene” window and “Orthologs” window of any other species of interest (target genome), select chromosome name, start and end coordinates in both “Gene” and “Orthologs” windows respectively and select “Orthology type” in “Orthologs” window. In addition to the default IDs that were selected in the “Gene” window please select another ID either in “Gene” or “Orthologs” windows. 3. On the left side pane, click on the “Filters” link. Expand the “Multi species comparisons” window on the central pane. Select “Homolog filters” and choose the orthologous genes set of the species that was earlier selected in the “Attributes” link. In addition select the option “only”. 4. Click on the “Results” button. Export all the unique results to a TSV file.
