* Your assessment is very important for improving the workof artificial intelligence, which forms the content of this project
Download Name
History of RNA biology wikipedia , lookup
Dominance (genetics) wikipedia , lookup
Mitochondrial DNA wikipedia , lookup
Holliday junction wikipedia , lookup
DNA profiling wikipedia , lookup
Site-specific recombinase technology wikipedia , lookup
Nutriepigenomics wikipedia , lookup
Designer baby wikipedia , lookup
Cancer epigenetics wikipedia , lookup
Genetic engineering wikipedia , lookup
Genomic library wikipedia , lookup
Bisulfite sequencing wikipedia , lookup
SNP genotyping wikipedia , lookup
DNA polymerase wikipedia , lookup
No-SCAR (Scarless Cas9 Assisted Recombineering) Genome Editing wikipedia , lookup
DNA damage theory of aging wikipedia , lookup
United Kingdom National DNA Database wikipedia , lookup
Genealogical DNA test wikipedia , lookup
DNA nanotechnology wikipedia , lookup
Epigenomics wikipedia , lookup
DNA vaccination wikipedia , lookup
Non-coding DNA wikipedia , lookup
Primary transcript wikipedia , lookup
Molecular cloning wikipedia , lookup
Vectors in gene therapy wikipedia , lookup
Gel electrophoresis of nucleic acids wikipedia , lookup
Point mutation wikipedia , lookup
Cell-free fetal DNA wikipedia , lookup
Therapeutic gene modulation wikipedia , lookup
DNA supercoil wikipedia , lookup
Cre-Lox recombination wikipedia , lookup
Extrachromosomal DNA wikipedia , lookup
Helitron (biology) wikipedia , lookup
Nucleic acid analogue wikipedia , lookup
Nucleic acid double helix wikipedia , lookup
Microevolution wikipedia , lookup
Artificial gene synthesis wikipedia , lookup
Name ______KEY___________________ Biology Final Exam Review Packet STUDY TIPS Use your textbook and your notes to prepare yourself for the Final Exam. DON’T CRAM! It’s a proven fact: studying for a little bit each day works better than waiting until the night before the exam. Remember to ask questions in class about concepts you want clarified. GUIDING QUESTIONS FOR FINAL EXAM 9. Genetics (Chapter 10) a. Describe the work of Gregor Mendel. Mendel experimented with pea plants and used cross-pollination techniques to study the inheritance of various factors. He took meticulous notes/ observations and discovered the basic laws of genetics without knowing anything about DNA or the structure of genes. b. What is the difference between a dominant and a recessive allele? A dominant allele is always expressed in the phenotype. A recessive allele is only expressed if there are no dominant alleles present. c. What are Mendel’s laws of segregation and independent assortment? Law of segregation – When an individual produces gametes, the two alleles for each gene separate so that each gamete only receives one allele. Law of independent assortment – Allele pairs separate independently during the formation of gametes. Basically, this means that the inheritance of any one trait does not affect or influence the inheritance of a second trait (assuming the traits are on different chromosomes). d. Draw Punnett squares for the following crosses: Aa x Aa; DdFf x DdFf. e. Explain the following exceptions to Mendel’s laws and give an example: i. Incomplete dominance – One allele is not completely dominant over the other, so the heterozygous condition is an intermediate phenotype. Example: Japanese snapdragons RR = red rr = white Rr = pink ii. Codominance – Two dominant alleles. Example: cattle color RR = Red WW = white RW = roan (red and white) iii. Lethal dominance – Heterozygous dominant condition is not viable. Example: achondroplasia (dwarfism) AA = not possible Aa = dwarfism aa = normal height iv. Multiple alleles – More than two alleles determine the phenotype of a single trait. Example: Human ABO blood groups IA = allele for A blood (dominant) IB = allele for B blood (dominant) i = allele for O blood (recessive) f. What are sex-linked traits? Why do they typically affect males more often than females? Sex-linked traits are traits on the X chromosome. They typically affect males more often than females because males (XY) only have one X chromosome and will therefore express all of their sex-linked recessive alleles. Females (XX) have two X chromosomes and can be carriers of a recessive sex-linked trait without expressing the phenotype. g. What is a pedigree? 10. Molecular Biology (Chapter 11) a. Describe the structure of DNA. Shape = double helix. Consists of nucleotides arranged in base pairs. Sugars and phosphates form the backbone. Strands are antiparallel. b. Describe the contributions of the following scientists to the discovery that DNA was the genetic material: i. Griffith – Injected two types of bacteria into mice. Found that a mixture of heat-killed pathogenic bacteria and living harmless bacteria transformed into living pathogenic bacteria and killed mice. ii. Avery – Confirmed that the transforming agent from Griffith’s experiment was the DNA from the heat-killed bacteria. iii. Hershey and Chase – Verified that DNA was the genetic material by radioactively labeling the proteins and DNA of phage and using a blender to determine which radioactive component penetrated bacteria cells. c. Describe the contributions of the following scientists to the discovery of the structure of DNA: i. Chargaff – Determined the base-pairing rules by observing that the number of A’s always equals the number of T’s in DNA (same for C’s and G’s). ii. Franklin – Used X-ray crystallography to determine the double helical structure of DNA. iii. Watson & Crick – Built the first accurate model of DNA. d. How does the structure of DNA suggest a replication mechanism for DNA? The double helix consists of complementary strands, which suggests that you could replicate DNA by unzipping the two strands and using each parent strand as the template for making a new copy of the DNA. e. Describe the steps of DNA replication. 1. Helicase unwinds the DNA. 2. Primase makes RNA primers. 3. DNA polymerase synthesizes new DNA on the leading strand from 5’ 3’ (working towards the replication fork). 4. On the lagging strand, DNA polymerase works away from the fork, synthesizing new DNA in short pieces called Okazaki fragments. 5. Ligase joins Okazaki fragments on the lagging strand. 6. DNA polymerase replaces the RNA primers with DNA. f. What is the difference between the leading and the lagging strand? Leading strand is synthesizes in continuous fashion, whereas the lagging strand is synthesized in short pieces and therefore takes longer. This is due to the antiparallel nature of DNA and the fact that DNA polymerase only works in the 5’ 3’ direction. g. What is the central dogma of biology? DNA mRNA protein h. Compare the structure of DNA with RNA. DNA: double helix, sugar is deoxyribose, bases A-T, C-G RNA: single strand, sugar is ribose, bases A-U, C, G i. Explain what happens during transcription. DNA is copied into mRNA by RNA polymerase. This needs to happen because DNA contains the instructions for making protein, but the instructions need to get from the nucleus (where DNA is stored) to the ribosome (site of protein synthesis). j. Explain what happens during translation. mRNA attaches to the ribosome, which “reads” the mRNA codons (sets of three bases) at a time and recruits the appropriate tRNA molecule. Each tRNA molecule is attached to a specific amino acid, the building blocks of protein. The protein is assembled as tRNA molecules bind to the mRNA and the amino acid that the tRNA delivers is added to the growing protein chain. Translation always begins with a start codon (AUG, which brings the amino acid Met) and ends at a stop codon (UGA, UAA, UAG). k. How does the genetic code provide evidence for evolution? All living things use the same genetic code, which suggest that this code was used for protein synthesis in a common ancestor of all living things. l. What is a mutation? A change to the DNA. m. Distinguish between the following types of mutations: i. Silent – Does not affect protein synthesis – the mutation codes for the same amino acid. ii. Missense – A different amino acid is used during protein synthesis (a substitution). iii. Nonsense – A premature stop codon. 11. Biotechnology (Chapter 13) a. What is genetic engineering? Describe some of its uses. Inserting genes from other organisms. Can be used to make medicines or to enrich the nutritional value of food. b. What are restriction enzymes? Enzymes that cut the DNA at specific target sequences. They are naturally found in bacteria cells for the sake of defense against viruses. Target sequences are always palindromes. c. What is a plasmid? A plasmid is a small, circular piece of DNA in bacteria cells that replicates on its own and can be transferred from one bacteria cell to another. Plasmids can be used to introduce new genes to bacteria. d. Explain the steps involved in engineering a bacteria that can make human insulin. 1. Identify the gene of interest (human insulin gene). 2. Isolate the gene of interest from the host chromosome using restriction enzyme. 3. Use the same restriction enzyme to cut the target DNA (where you will insert your gene – most likely a plasmid). 4. Mix the DNA together and add ligase to seal the bonds. 5. Transform bacteria (allow bacteria to take up the plasmid). 6. Grow bacteria and test for success of transformation. e. What is gel electrophoresis? Using an electric current and agarose gel to separate DNA fragments based on size. Smaller fragments migrate farther distances due to the negative charge on DNA molecules. 12. Cellular Respiration (Chapter 7) a. How does ATP provide energy for cellular work? ATP has high-energy bonds between its phosphate groups. Breaking the bond between the 2nd and 3rd phosphate group releases energy that can be coupled to an endergonic reaction. b. What is the difference between anaerobic and aerobic respiration? Anaerobic – does not require oxygen. Consists of glycolysis and either lactic acid fermentation (muscles) or alcoholic fermentation. Net gain of 2 ATP molecules per glucose. Aerobic – requires oxygen. Consists of glycolysis followed by Krebs cycle and electron transport chain. Net gain of 36-38 ATP molecules per glucose. c. What is the overall equation for aerobic cellular respiration? C6H12O6 + 6O2 --> 6CO2 + 6H2O + energy d. Describe the structure of the mitochondrion. e. Explain what happens during glycolysis and where it takes place. Glucose is broken down into two pyruvate molecules. 2 ATP molecules are needed to start the process, but 4 are produced, resulting in a net gain of 2 molecules. NADH molecules are generated for use in the electron transport chain. Occurs in the cytoplasm. f. Explain what happens during the Krebs cycle and where it takes place. Occurs in the mitochondrial matrix. Each pyruvate molecule is broken down into carbon dioxide, generating NADH and FADH2 molecules for use in the electron transport chain as well as a total of 2 ATP molecules per glucose. g. Explain what happens during the electron transport chain and where it takes place. NADH and FADH2 molecules drop off their electrons to proteins in inner membrane of mitochondria. As electrons are passed along chain, hydrogen ions are pumped into the intermembrane space. Oxygen ultimately accepts the electrons and combines with hydrogen ions to create water. Hydrogen ions flow back through the membrane (down their concentration gradient), powering an enzyme that makes 32-34 ATP molecules per glucose. h. Why does fermentation take place in cells that lack mitochondria or when there is not enough oxygen present? Fermentation is necessary to recycle the electron carrier NAD+ and to complete the breakdown of pyruvate. 13. Photosynthesis (Chapter 8) a. How do autotrophs use light energy to make food? Sunlight is used to make ATP. ATP is then used to produce sugar molecules from carbon dioxide and water. b. What is the overall equation for photosynthesis? 6CO2 + 12H2O + light → C6H12O6 + 6O2 + 6H2O c. What are the major parts of a leaf and their functions? d. Describe the structure of the chloroplast. e. Explain what happens during the light-dependent reactions. Electrons in chlorophyll molecules (stored in the thylakoid) are excited by sunlight. These high-energy electrons are passed down an electron transport chain to generate ATP molecules (as in cellular respiration). Water is split to replace these electrons, releasing oxygen gas. ATP is used in lightindependent reactions to make sugar. f. Explain what happens during the dark-dependent reactions. In the stroma, ATP and carbon dioxide are used to make glucose molecules. This is also called the Calvin cycle. g. Identify two factors that affect the rate of photosynthesis. Temperature Light intensity Amount of carbon dioxide h. Explain the complimentary nature of photosynthesis and cellular respiration. They are opposite processes – the products of one are the reactants of the other.