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Chapter 6 A Tour of the Cell PowerPoint® Lecture Presentations for Biology Eighth Edition Neil Campbell and Jane Reece 1 Lectures by Chris Romero, updated by Erin Barley with contributions from Joan Sharp Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings What? A microscope is an instrument for viewing objects that are much too small to be seen with the naked eye It uses one or more glass lenses which magnify the objects 2 How? Lens makers ground “beads” of glass into lenses Compound microscopes use more than one lens By the mid 1600’s microscopes could magnify an object 270 times 3 Who? Zacharias Janssen- who was credited with trying to create lenses with stronger magnification for people with poor eyesight (which evolved into a lens for a scope) Robert Hooke- important in the development of the fields of astronomy, physics, biology and medicine (just to name a few). He was the first person to have seen cork cells (using a microscope) 4 Who? Probably most important was: Anton Van Leeuwenhoek whom discovered: bacteria, free-living and parasitic microscopic protists, sperm cells, blood cells, microscopic nematodes and rotifers, and much more 5 What happened next? The advances made by these scientists by the 1600’s later lead to the formulation of one of the MAJOR theories in science: The Cell Theory 6 The modern beliefs of the Cell Theory include: 1. all known living things are made up of cells. 2. the cell is the basic structural & functional unit of all living things. 7 The modern beliefs of the Cell Theory include: 3. all cells come from preexisting cells by division. (Spontaneous Generation does not occur). 4. cells contain hereditary information which is passed from cell to cell during cell division 8 The modern beliefs of the Cell Theory include: 5. All cells are basically the same in chemical composition. 6. all energy flow (metabolism & biochemistry) of life occurs within cells. 9 Fig. 6-1 3 IMPORTANT BIOLOGY EXPERIMENTS 10 Microscopy Scientists use microscopes to visualize cells too small to see with the naked eye In a light microscope (LM), visible light passes through a specimen and then through glass lenses, which magnify the image The quality of an image depends on Magnification, the ratio of an object’s image size to its real size Resolution, the measure of the clarity of the image, or the minimum distance of two distinguishable points Contrast, visible differences in parts of the sample 11 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings 10 m 1m Human height Length of some nerve and muscle cells 0.1 m Chicken egg 1 cm Unaided eye Fig. 6-2 Frog egg Most plant and animal cells 10 µm Nucleus Most bacteria 1 µm 100 nm 10 nm Mitochondrion Smallest bacteria Viruses Ribosomes Proteins Lipids 1 nm Small molecules 12 0.1 nm Atoms Electron microscope 100 µm Light microscope 1 mm LMs can magnify effectively to about 1,000 times the size of the actual specimen Various techniques enhance contrast and enable cell components to be stained or labeled Most subcellular structures, including organelles (membraneenclosed compartments), are too small to be resolved by an LM 13 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Cell Fractionation Cell fractionation takes cells apart and separates the major organelles from one another Ultracentrifuges fractionate cells into their component parts Cell fractionation enables scientists to determine the functions of organelles Biochemistry and cytology help correlate cell function with structure 14 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-5 TECHNIQUE Homogenization Tissue cells Homogenate 1,000 g (1,000 times the force of gravity) Differential centrifugation 10 min Supernatant poured into next tube 20,000 g 20 min Pellet rich in nuclei and cellular debris 80,000 g 60 min 150,000 g 3 hr Pellet rich in mitochondria (and chloroplasts if cells are from a plant) 15 Pellet rich in “microsomes” (pieces of plasma membranes and cells’ internal membranes) Pellet rich in ribosomes Fig. 6-5a TECHNIQUE Homogenization Tissue cells 16 Differential centrifugation Homogenate Fig. 6-5b TECHNIQUE (cont.) 1,000 g (1,000 times the force of gravity) 10 min Supernatant poured into next tube 20,000 g 20 min 80,000 g 60 min Pellet rich in nuclei and cellular debris 150,000 g 3 hr Pellet rich in mitochondria (and chloroplasts if cells are from a plant) 17 Pellet rich in “microsomes” (pieces of plasma membranes and cells’ internal membranes) Pellet rich in ribosomes Concept 6.2: Eukaryotic cells have internal membranes that compartmentalize their functions The basic structural and functional unit of every organism is one of two types of cells: prokaryotic or eukaryotic Only organisms of the domains Bacteria and Archaea consist of prokaryotic cells Protists, fungi, animals, and plants all consist of eukaryotic cells 18 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Two “kinds” of cells: First kind: Cells that DO NOT have their hereditary information (DNA) located within a MEMBRANE BOUND nucleus These are called “Prokaryotic” cells 19 Prokaryotic cells: Prokaryotes include the kingdoms of Monera (simple bacteria) and Archaea. They are molecules surrounded by a membrane and cell wall. They do not have organelles (“mini organs”) They might have photosynthetic pigments (like cyanobacteria) They might have flagella for locomotion or hair20like pili for adhesion Shapes of bacteria Bacteria can be found as Cocci (spheres), Baccilli (rods) or Spirilla (spirals). 21 Prokaryote Reproduction Bacteria and archaea reproduce by a process called binary fission. The DNA is copied and the cell grows. Once the cell gets large enough it pinches itself off into two daughter cells What kind of cellular reproduction is this? 22 Binary Fission 23 http://www.youtube.com/watch? v=7stZk6TesKk bacterial conjugation 24 Comparing Prokaryotic and Eukaryotic Cells Basic features of all cells: Plasma membrane Semifluid substance called cytosol Chromosomes (carry genes) Ribosomes (make proteins) 25 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-6 Fimbriae Nucleoid Ribosomes Plasma membrane Bacterial chromosome Cell wall Capsule 0.5 µm (a) A typical rod-shaped bacterium 26 Flagella (b) A thin section through the bacterium Bacillus coagulans (TEM) Prokaryote parts: The capsule is outside of the cell wall and is made of polysaccharides, it is a virulent factor meaning it enhances the ability for the bacteria to cause disease Fimbria are protein structures that allow bacteria to cling to each other or to other organisms Nucleoid (nucleus like) structure contains the DNA of the bacterial cell Ribosomes large complex of RNA and protein that is used to catalyze translation (making protein from RNA) 27 Cell wall- acts as protective barrier, structural support and filter Cell membrane-selectively permeable, allows things in/out of cell 28 • Eukaryotic cells are characterized by having DNA in a nucleus that is bounded by a membranous nuclear envelope Membrane-bound organelles Cytoplasm in the region between the plasma membrane and nucleus Eukaryotic cells are generally much larger than prokaryotic 29 cells Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings The plasma membrane is a selective barrier that allows sufficient passage of oxygen, nutrients, and waste to service the volume of every cell The general structure of a biological membrane is a double layer of phospholipids (more on this in chapter 7) 30 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-7 Outside of cell Inside of cell 0.1 µm (a) TEM of a plasma membrane Carbohydrate side chain Hydrophilic region Hydrophobic region 31 Hydrophilic region Phospholipid Proteins (b) Structure of the plasma membrane The logistics of carrying out cellular metabolism sets limits on the size of cells The surface area to volume ratio of a cell is critical As the surface area increases by a factor of n2, the volume increases by a factor of n3 Small cells have a greater surface area relative to volume 32 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Ratio of Surface Area to Volume 33 As the cell grows, its volume increases much more rapidly than the surface area. The cell might have difficulty supplying nutrients and expelling enough waste products. 34 Transport of Substances Substances move by diffusion or by motor proteins. Diffusion over large distances is slow and inefficient. Small cells maintain more efficient transport systems. 35 Cellular Communications The need for signaling proteins to move throughout the cell also limits cell size. Cell size affects the ability of the cell to communicate instructions for cellular functions. 36 Fig. 6-8 Surface area increases while total volume remains constant 5 1 1 Total surface area [Sum of the surface areas (height width) of all boxes sides number of boxes] Total volume [height width length number of boxes] 37 Surface-to-volume (S-to-V) ratio [surface area ÷ volume] 6 150 750 1 125 125 6 1.2 6 A Panoramic View of the Eukaryotic Cell A eukaryotic cell has internal membranes that partition the cell into organelles (some of the chemical reactions need to be isolated from each other because the environment wouldn’t be conducive to them happening in one jumble) Plant and animal cells have most of the same organelles BioFlix: Tour Of An Animal Cell 38 BioFlix: Tour Of A Plant Cell Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-9a Nuclear envelope ENDOPLASMIC RETICULUM (ER) Flagellum Rough ER NUCLEUS Nucleolus Smooth ER Chromatin Centrosome Plasma membrane CYTOSKELETON: Microfilaments Intermediate filaments Microtubules Ribosomes Microvilli Golgi apparatus Peroxisome 39 Mitochondrion Lysosome Fig. 6-9b NUCLEUS Nuclear envelope Nucleolus Chromatin Rough endoplasmic reticulum Smooth endoplasmic reticulum Ribosomes Central vacuole Golgi apparatus Microfilaments Intermediate filaments Microtubules Mitochondrion Peroxisome Chloroplast Plasma membrane Cell wall Plasmodesmata 40 Wall of adjacent cell CYTOSKELETON Concept 6.3: The eukaryotic cell’s genetic instructions are housed in the nucleus and carried out by the ribosomes The nucleus contains most of the DNA in a eukaryotic cell (there is also some DNA found in the mitochondria called mtDNA) Ribosomes use the information from the DNA to make proteins 41 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings The Nucleus: Information Central The nucleus contains most of the cell’s genes and is usually the most conspicuous organelle The nuclear envelope encloses the nucleus, separating it from the cytoplasm There are pores in the nuclear envelope The pore complex lines each pore and regulates the passage of proteins, RNAs and large macromolecules The nuclear membrane is a double membrane; each membrane consists of a lipid bilayer 42 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-10 Nucleus 1 µm Nucleolus Chromatin Nuclear envelope: Inner membrane Outer membrane Nuclear pore Pore complex Surface of nuclear envelope Rough ER Ribosome 1 µm 0.25 µm Close-up of nuclear envelope 43 Pore complexes (TEM) Nuclear lamina (TEM) The shape of the nucleus is maintained by the nuclear lamina, which is composed of protein It is a “net like” array of protein filaments (on the inside of the nuclear membrane; think of mesh) that helps not only in maintaining the shape of the nucleus, but also helps to mechanically support the nuclear envelope It also helps regulate important cell events like DNA replication and cell division 44 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings In the nucleus, DNA and proteins form genetic material called chromatin (a thin threadlike form of chromosomes) the nuclear lamina also helps in this chromatin organization Chromatin condenses to form discrete chromosomes (several different forms we will learn in cell reproduction chapters) The nucleolus is located within the nucleus and is the site of ribosomal RNA (rRNA) synthesis Nucleolus chromatin 45 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Ribosomes: Protein Factories Ribosomes are particles made of ribosomal RNA and protein (made by the nucleolus) Ribosomes carry out protein synthesis in two locations: In the cytosol (free ribosomes); these make proteins that are used in the cell On the outside of the endoplasmic reticulum or the nuclear envelope (bound ribosomes); if a ribosome makes a protein that is needed for another organelle the ribosome becomes embedded in the ER and it inserts the new protein into the ER; it is then transported to its destination via the secretory pathway 46 They are structurally identical and can alternate between the ER and cytosol Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-11 Cytosol Endoplasmic reticulum (ER) Free ribosomes Bound ribosomes Large subunit 0.5 µm TEM showing ER and ribosomes 47 Small subunit Diagram of a ribosome Concept 6.4: The endomembrane system regulates protein traffic and performs metabolic functions in the cell Components of the endomembrane system: Nuclear envelope (already talked about this) Endoplasmic reticulum Golgi apparatus Lysosomes Vacuoles Plasma membrane • These components are either related through direct physical continuity or via transfer of membrane segments by tiny vesicles 48 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings The Endoplasmic Reticulum: Biosynthetic Factory The endoplasmic reticulum (ER) accounts for more than half of the total membrane in many eukaryotic cells The ER membrane is continuous with the nuclear envelope There are two distinct regions of ER: Smooth ER, which lacks ribosomes Rough ER, with ribosomes studding its surface 49 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-12 Smooth ER Rough ER ER lumen Cisternae Ribosomes Transport vesicle Smooth ER 50 Nuclear envelope Transitional ER Rough ER 200 nm Functions of Smooth ER The smooth ER Synthesizes lipids Metabolizes carbohydrates Detoxifies poison Stores calcium THE FUNCTION DEPENDS ON THE TYPE OF CELL IT IS FOUND IN: In liver cells the smooth ER produces enzymes (enzymes are proteins) that help to detoxify certain compounds. This usually involves adding a hydroxyl group to drugs to make them more water soluble 51 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings In muscles the smooth ER assists in the contraction of muscle cells. It stores calcium ions that are released across the ER into the cytosol and triggers muscle contraction. In brain cells it synthesizes male and female hormones (hormones are proteins). 52 Functions of Rough ER The rough ER Has bound ribosomes, which secrete glycoproteins (proteins covalently bonded to carbohydrates) Once a protein is made it distributes the protein to where it is needed by transport vesicles, proteins surrounded by membranes Is a membrane factory for the cell http://www.youtube.com/watch?v= VB3PTN05b5U Biosynthetic secretory pathway 53 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings The Golgi Apparatus: Shipping and Center Receiving The Golgi apparatus consists of flattened membranous sacs called cisternae; the cisternae are not believed to be directly connected so a series of budding, vesicle formation and fusion with the next golgi sac Functions of the Golgi apparatus: Modifies products of the ER (like proteins and phospholipids) Manufactures certain macromolecules Sorts and packages materials into transport vesicles (it tags them so they are sorted correctly) The cis face is the “receiving” end and is closely associated with the ER 54 The trans face is the “shipping” end Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-13 cis face (“receiving” side of Golgi apparatus) 0.1 µm Cisternae trans face (“shipping” side of Golgi apparatus) 55 TEM of Golgi apparatus Lysosomes: Digestive Compartments A lysosome is a membranous sac of hydrolytic enzymes that can digest macromolecules Lysosomal enzymes can hydrolyze proteins, fats, polysaccharides, and nucleic acids Made by the ER and golgi If they are compromised wouldn’t do a terrible amount of damage because the cytosol is neutral Act as the recyclers of the cell (trashmen) Believed to be a part of programmed cell death (apoptosis) If defective can cause 50 different diseases because substances destined for recycling just accumulate in the cell; Tay-sach’s is one of these disorders 56 Animation: Lysosome Formation Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Some types of cell can engulf another cell by phagocytosis; this forms a food vacuole A lysosome fuses with the food vacuole and digests the molecules Lysosomes also use enzymes to recycle the cell’s own organelles and macromolecules, a process called autophagy http://www.youtube.com/watch?v=aWItglvTiLc Amoeba engulfing paramecium by phagocytosis 57 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-14 Nucleus 1 µm Vesicle containing two damaged organelles 1 µm Mitochondrion fragment Peroxisome fragment Lysosome Lysosome Digestive enzymes Plasma membrane Lysosome Peroxisome Digestion Food vacuole Vesicle (a) Phagocytosis 58 (b) Autophagy Mitochondrion Digestion Vacuoles: Diverse Maintenance Compartments A plant cell or fungal cell may have one or several vacuoles You won’t see as many in animal cells Food vacuoles are formed by phagocytosis Contractile vacuoles, found in many freshwater protists, pump excess water out of cells in order to maintain ion concentrations Central vacuoles, found in many mature plant cells, hold organic compounds and water, store pigments to attract pollinators, store wastes, store poisons to keep animals from consuming 59 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-15 Central vacuole Cytosol Nucleus Central vacuole Cell wall Chloroplast 60 5 µm The Endomembrane System: A Review The endomembrane system is a complex and dynamic player in the cell’s compartmental organization 61 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-16-3 Nucleus Rough ER Smooth ER cis Golgi 62 trans Golgi Plasma membrane Concept 6.5: Mitochondria and chloroplasts change energy from one form to another Mitochondria are the sites of cellular respiration, a metabolic process that generates ATP (found especially in areas that require a lot of energy) Chloroplasts, found in plants and algae, are the sites of photosynthesis Peroxisomes are oxidative organelles 63 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Mitochondria and chloroplasts Are not part of the endomembrane system Have a double membrane Have proteins made by free ribosomes Contain their own DNA WHY? 64 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Mitochondria: Chemical Energy Conversion (we will learn about this in chapter 9) Mitochondria are in nearly all eukaryotic cells (their membranes are made by free ribosomes; considered to be semiautonomous) They have a smooth outer membrane and an inner membrane folded into cristae The inner membrane creates two compartments: intermembrane space and mitochondrial matrix Some metabolic steps of cellular respiration are catalyzed in the mitochondrial matrix Cristae present a large surface area for enzymes that synthesize ATP; the folding increases the surface 65 area Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Chloroplasts: Capture of Light Energy The chloroplast is a member of a family of organelles called plastids Chloroplasts contain the green pigment chlorophyll, as well as enzymes and other molecules that function in photosynthesis Chloroplasts are found in leaves and other green organs of plants and in algae 66 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Chloroplast structure includes: Thylakoids, membranous sacs, stacked to form a granum to increase surface area and efficiency for photosynthesis Stroma, the internal fluid 67 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-18 Ribosomes Stroma Inner and outer membranes Granum Thylakoid 68 1 µm Peroxisomes: Oxidation Peroxisomes are specialized metabolic compartments bounded by a single membrane Peroxisomes produce hydrogen peroxide (it moves H from substances to oxygen and makes peroxide as a byproduct) and convert it to water Oxygen is used to break down different types of molecules (like fatty acids, alcohol) 69 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-19 Chloroplast Peroxisome Mitochondrion 70 1 µm Concept 6.6: The cytoskeleton is a network of fibers that organizes structures and activities in the cell The cytoskeleton is a network of fibers extending throughout the cytoplasm It organizes the cell’s structures and activities, anchoring many organelles It is composed of three types of molecular structures: Microtubules Microfilaments Intermediate filaments 71 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-20 Microtubule 0.25 µm 72 Microfilaments Roles of the Cytoskeleton: Support, Motility, and Regulation The cytoskeleton helps to support the cell and maintain its shape It interacts with motor proteins to produce motility Inside the cell, vesicles can travel along “monorails” provided by the cytoskeleton Recent evidence suggests that the cytoskeleton may help regulate biochemical activities 73 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-21 ATP Vesicle Receptor for motor protein Motor protein Microtubule (ATP powered) of cytoskeleton (a) Microtubule 74 (b) Vesicles 0.25 µm Components of the Cytoskeleton Three main types of fibers make up the cytoskeleton: Microtubules are the thickest of the three components of the cytoskeleton Microfilaments, also called actin filaments, are the thinnest components Intermediate filaments are fibers with diameters in a middle range 75 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Table 6-1 10 µm 10 µm 10 µm Column of tubulin dimers Keratin proteins Actin subunit Fibrous subunit (keratins coiled together) 25 nm 76 7 nm Tubulin dimer 8–12 nm Microtubules Microtubules are hollow rods about 25 nm in diameter and about 200 nm to 25 microns long Functions of microtubules: Shaping the cell Guiding movement of organelles Separating chromosomes during cell division 77 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Centrosomes and Centrioles In many cells, microtubules grow out from a centrosome near the nucleus The centrosome is a “microtubule-organizing center” In animal cells, the centrosome has a pair of centrioles, each with nine triplets of microtubules arranged in a ring Centrioles give rise to spindle fibers which attach to chromosomes and move them around during cell reproduction 78 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-22 Centrosome Microtubule Centrioles 0.25 µm 79 Longitudinal section Microtubules Cross section of one centriole of the other centriole Cilia and Flagella Microtubules control the beating of cilia and flagella, locomotor appendages of some cells Cilia and flagella differ in their beating patterns Help in locomotion, or directing the flow of substances 80 Video: Chlamydomonas Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Video: Paramecium Cilia Fig. 6-23 Direction of swimming (a) Motion of flagella 5 µm Direction of organism’s movement Power stroke Recovery stroke 81 (b) Motion of cilia 15 µm Fig. 6-27bc Cortex (outer cytoplasm): gel with actin network Inner cytoplasm: sol with actin subunits Extending pseudopodium (b) Amoeboid movement Nonmoving cortical cytoplasm (gel) Chloroplast Streaming cytoplasm (sol) Vacuole Parallel actin filaments 91 (c) Cytoplasmic streaming in plant cells Cell wall • Localized contraction brought about by actin and myosin also drives amoeboid movement • Pseudopodia (cellular extensions) extend and contract through the reversible assembly and contraction of actin subunits into microfilaments 92 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Cytoplasmic streaming is a circular flow of cytoplasm within cells This streaming speeds distribution of materials within the cell In plant cells, actin-myosin interactions and sol-gel transformations drive cytoplasmic streaming http://www.youtube.com/watch?v=pFsty-XyLZc http://highered.mcgrawhill.com/sites/9834092339/student_view0/chapter4/animation__cytoplasmic_streaming.html 93 Video: Cytoplasmic Streaming Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Concept 6.7: Extracellular components and connections between cells help coordinate cellular activities Most cells synthesize and secrete materials that are external to the plasma membrane These extracellular structures include: Cell walls of plants The extracellular matrix (ECM) of animal cells Intercellular junctions 95 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Cell Walls of Plants The cell wall is an extracellular structure that distinguishes plant cells from animal cells Prokaryotes, fungi, and some protists also have cell walls The cell wall protects the plant cell, maintains its shape, and prevents excessive uptake of water Plant cell walls are made of cellulose fibers embedded in other polysaccharides and protein 96 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Plant cell walls may have multiple layers: Primary cell wall: relatively thin and flexible (made first) Middle lamella: thin layer between primary walls of adjacent cells (has pectin in it to “glue” adjacent cells together) Secondary cell wall (in some cells): added between the plasma membrane and the primary cell wall • Plasmodesmata are channels between adjacent plant cells that allow passage of materials 97 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Functions of the ECM: Support Adhesion Movement Regulation Break down of collagen as we age: facial creams with copper peptides; foods rich in lysine and proline amino acids; foods high in vitamin C, eat garlic 104 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Intercellular Junctions Neighboring cells in tissues, organs, or organ systems often adhere, interact, and communicate through direct physical contact Intercellular junctions facilitate this contact There are several types of intercellular junctions Plasmodesmata (talked about in cell wall structure) Tight junctions Desmosomes 105 Gap junctions Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Plasmodesmata in Plant Cells Plasmodesmata are channels that perforate plant cell walls Through plasmodesmata, water and small solutes (and sometimes proteins and RNA) can pass from cell to cell 106 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-31 Cell walls Interior of cell Interior of cell 0.5 µm 107 Plasmodesmata Plasma membranes Tight Junctions, Desmosomes, and Gap Junctions in Animal Cells At tight junctions, membranes of neighboring cells are pressed together, preventing leakage of extracellular fluid Desmosomes (anchoring junctions) fasten cells together into strong sheets Gap junctions (communicating junctions) provide cytoplasmic channels between adjacent cells Animation: Tight Junctions Animation: Desmosomes 108 Animation: Gap Junctions Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-32 Tight junction Tight junctions prevent fluid from moving across a layer of cells 0.5 µm Tight junction Intermediate filaments Desmosome Gap junctions 109 Space between cells Plasma membranes of adjacent cells Desmosome 1 µm Extracellular matrix Gap junction 0.1 µm Fig. 6-32b Tight junction Used to maintain a tight barrier between cells; hold cells together; makes sure the ions have to pass into the cell instead of the spaces between the cells 110 0.5 µm Fig. 6-32c Acts to adhere cells to each other; mutations can cause Arrythmogenic right ventricular cardiomyapothy; associated with blistering diseases if not functioning Desmosome correctly 111 1 µm Fig. 6-32d Connect the cytoplasm Between different cells Allowing ions and other Substances to pass; allows Electrical Gap junction communication Between cells and chemical Communication between cells 112 0.1 µm The Cell: A Living Unit Greater Than the Sum of Its Parts Cells rely on the integration of structures and organelles in order to function For example, a macrophage’s ability to destroy bacteria involves the whole cell, coordinating components such as the cytoskeleton, lysosomes, and plasma membrane http://www.youtube.com/watch?v=Ao9cVhwPg84&feature=related 113 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings Fig. 6-UN1 Cell Component Concept 6.3 The eukaryotic cell’s genetic instructions are housed in the nucleus and carried out by the ribosomes Structure Surrounded by nuclear envelope (double membrane) perforated by nuclear pores. The nuclear envelope is continuous with the endoplasmic reticulum (ER). Nucleus Function Houses chromosomes, made of chromatin (DNA, the genetic material, and proteins); contains nucleoli, where ribosomal subunits are made. Pores regulate entry and exit of materials. (ER) Two subunits made of riboProtein synthesis somal RNA and proteins; can be free in cytosol or bound to ER Ribosome Concept 6.4 The endomembrane system regulates protein traffic and performs metabolic functions in the cell Concept 6.5 Mitochondria and chloroplasts change energy from one form to another Extensive network of membrane-bound tubules and sacs; membrane separates lumen from cytosol; continuous with the nuclear envelope. Smooth ER: synthesis of lipids, metabolism of carbohydrates, Ca2+ storage, detoxification of drugs and poisons Golgi apparatus Stacks of flattened membranous sacs; has polarity (cis and trans faces) Modification of proteins, carbohydrates on proteins, and phospholipids; synthesis of many polysaccharides; sorting of Golgi products, which are then released in vesicles. Lysosome Membranous sac of hydrolytic enzymes (in animal cells) Vacuole Large membrane-bounded vesicle in plants Digestion, storage, waste disposal, water balance, cell growth, and protection Mitochondrion Bounded by double membrane; inner membrane has infoldings (cristae) Cellular respiration Endoplasmic reticulum (Nuclear envelope) Chloroplast Peroxisome 114 Rough ER: Aids in synthesis of secretory and other proteins from bound ribosomes; adds carbohydrates to glycoproteins; produces new membrane Breakdown of ingested substances, cell macromolecules, and damaged organelles for recycling Typically two membranes Photosynthesis around fluid stroma, which contains membranous thylakoids stacked into grana (in plants) Specialized metabolic compartment bounded by a single membrane Contains enzymes that transfer hydrogen to water, producing hydrogen peroxide (H2O2) as a by-product, which is converted to water by other enzymes in the peroxisome You should now be able to: 1. Distinguish between the following pairs of terms: magnification and resolution; prokaryotic and eukaryotic cell; free and bound ribosomes; smooth and rough ER 2. Describe the structure and function of the components of the endomembrane system 3. Briefly explain the role of mitochondria, chloroplasts, and peroxisomes 4. Describe the functions of the cytoskeleton 115 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings 5. Compare the structure and functions of microtubules, microfilaments, and intermediate filaments 6. Explain how the ultrastructure of cilia and flagella relate to their functions 7. Describe the structure of a plant cell wall 8. Describe the structure and roles of the extracellular matrix in animal cells 9. Describe four different intercellular junctions 116 Copyright © 2008 Pearson Education, Inc., publishing as Pearson Benjamin Cummings