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Biochemical Society Transactions ~ lsoforms of acetyl-CoA carboxylase: structures, regulatory properties and metabolic functions I232 R. W. Brownsey’, R. Zhande and A. N. Boone Department of Biochemistry and Molecular Biology, The University of British Columbia, Vancouver, British Columbia, Canada V6T I 2 3 Acetyl-CoA carboxylase (ACC; EC 6.4.1.2) catalyses the formation of malonyl-CoA, which is essential as a metabolic substrate and as a modulator of specific protein activity. Malonyl-CoA is a substrate for fatty acid synthase (FAS), for polyketide synthases (in plants, fungi and bacteria) and for fatty acyl chain-elongation systems. As an allosteric modulator, malonyl-CoA potently inhibits carnitine palmitoyltransferase-I (CPT-I), with far-reaching effects on intermediary metabolism and cell secretory functions. ACC contributes importantly to flux control in fatty acid biosynthesis and b-oxidation and is subject to a range of interacting mechanisms that dictate tissue-specific expression and specific enzyme activity. Detailed reviews of ACC enzymology appeared in the late 1980s [l-31, so we focus on selected developments since 1990, with most emphasis on the properties of the mammalian multifunctional ACC polypeptides. We discuss the structure and regulation of the ACC genes only briefly, since these aspects are dealt with elsewhere [4]. ACC reaction and mechanism The overall reaction catalysed by ACC is a twostep process that involves ATP-dependent formation of carboxybiotin followed by transfer of the carboxyl moiety to acetyl-CoA to form malonyl-CoA. ACCs possess distinct active sites for biotin carboxylation and for carboxyl transfer together with a ‘mobile’ biotin that acts as a carboxyl carrier between the two active sites. The first half-reaction of biotin carboxylation probably involves initial biotin-independent activation of bicarbonate, because ATP/ADP nucleotide exchange is not inhibited by avidin and a formal carboxy-phosphate intermediate has been Abbreviations used: ACC, acetyl-CoA carboxylase; FAS, fatty acid synthase; CPT-I, carnitine palmitoyl transferase I; BCCP, biotin carboxyl carrier protein; AMP-PK, AMP-activated protein kinase; PKA, CAMPdependent protein kinase; MAP, mitogen-activated protein; JNK, c J u n N-terminal kinase; PI 3-K, phosphatidylinositol 3-OH kinase; ERK, extracellular signal-related protein kinase. ‘To whom correspondence should be addressed. Volume 25 observed, at least in studies with pyruvate carboxylase [5,6]. The carboxyl transferase halfreaction proceeds via proton extraction, which generates a reactive carbanion on the methyl carbon of acetyl-CoA [7]. Detailed structural studies, which are most advanced for the Escherichiu coli ACC subunits, should provide further definition of the details of the ACC reaction mechanisms [8]. Roles of ACC Biotin-dependent carboxylases emerged early in evolution and are well conserved between eubacteria, unicellular eukaryotes, plants and animals. The importance of malonyl-CoA in cell metabolism is most directly reflected by the fact that ACC expression is essential for normal growth of bacteria, yeast and isolated animal cells in culture. For example, diploid yeast cells deficient in ACC show aberrant mitosis [9], and corresponding haploid spores fail to enter vegetative growth [lo]. Specific ablation of the ACC gene in animals has not yet been reported, although inhibition of fatty acid synthesis leads to apoptosis in cultured mammalian cancer cell lines [ 1 13. Roles ofACC in fatty acid synthesis In unicellular organisms, long-chain fatty acids are most important for membrane lipid synthesis; regulation of ACC therefore reflects control of phospholipid biosynthesis and of overall cell growth. In multicellular organisms, de novo biosynthesis of long-chain fatty acids makes an important contribution to the synthesis of energy stores as well as to membrane lipid structure; so regulation of energy homoeostasis also impacts importantly on ACC expression and activity. The most prominent product of FAS is palmitate (16:0), but longer chain lengths are essential for the production of eicosanoids, sphingolipids and other products important in intra- and inter-cellular communication and in specific organelle membrane functions [ 121. Acyl chain elongation is achieved by enzyme systems in mitochondria and endoplasmic reticulum but only the latter uses malonyl-CoA as a carbon donor [13]. Molecular Aspects of the Regulation of Lipid Biosynthesis A third general metabolic fate for malonylCoA occurs predominantly in plants, fungi and bacteria with the biosynthesis of polyketides [ 141, where the polyketide synthases may be regarded as a family of diverse and highly adapted variants of FAS. Finally, it is important to note that ACC itself may be a target for feedback regulation by malonyl-CoA if consumption by FAS or other systems is restricted. Therefore, in cells that express low levels of enzymes that consume malonyl-CoA, removal must be effected by alternative routes - notably by decarboxylation back to acetyl-CoA [ 151. Roles of ACC in fatty acid oxidation Fatty acid oxidation within mitochondria is influenced by ACC, because malonyl-CoA is a potent inhibitor of the entry of fatty acyl chains into the mitochondrial matrix. This role of malonyl-CoA was first noted in the context of the regulation of hepatic ketogenesis [ 161 and involves direct binding of malonyl-CoA to the catalytic subunit of CPT-I [17]. In some situations, the direct effect of malonyl-CoA may be compounded by other mechanisms which alter the sensitivity of the CPT-I to malonyl-CoA [18]. Fatty acid degradation also occurs in peroxisomes, in particular to shorten very long fatty acyl chains before mitochondrial oxidation, but the entry of fatty acyl chains into peroxisomes is apparently not dependent on carnitine, even though a malonyl-CoA-sensitive CPT-I does appear to be present [19]. In addition to its role in the regulation of hepatic CPT-I, malonyl-CoA is also critical in the regulation of fuel selection in muscle cells [20,21]. Furthermore, generation of malonyl-CoA is important in the nutrient-induced increase in insulin secretion from pancreatic /]-cells [21-231. It has been proposed that increases in malonyl-CoA in /]-cells may lead to re-direction of fatty acyl-CoA esters to sites that impact on the secretory process. Distinct forms of ACC Two broad classes of ACC have so far been detected, in one of which the three major functional domains exist on two or more distinct polypeptides. In contrast, all eukaryotic cells studied so far express forms of the second major class of ACC in which all the functional domains are contained within a contiguous polypeptide sequence. Forms of ACC with functional domains on two or more distinct polypeptides In E. coli, four component polypeptides of ACC are encoded by distinct genes accA-accD. Biotin carboxyl carrier protein (BCCP, 17 kDa) is encoded by accB; biotin carboxylase (which assembles as a dimer of two 49 kDa subunits) by accC; and the cy- and P-subunits of carboxyl transferase (which assemble as a 130 kDa cy2//jz tetramer) by accA and accD respectively. Other bacteria which have been studied, including Anabeana sp. and Pseudomonas sp. also express ACC with multiple subunits similar to those in E. coli. ‘Prokaryotic’ ACCs are also found in the plastids of certain (dicotyledenous) plants, although these plant ACC forms have larger BCCP subunits and assemble into larger active complexes than bacterial ACC [24-261. In several biotin carboxylases, including rat and human propionyl-CoA carboxylase, biotin carboxylase and BCCP are encoded by a single gene. This raises the possibility of forms of ACC that comprise only two functional polypeptides, as suggested for Corynebacterium glutamicum ~271. Forms of ACC with all fimctional domains assembled on a single polypeptide Yeast ACC, encoded by the single-copy ACCI gene, is highly related to other eukaryotic forms of the enzyme and is expressed as a tetrameric protein with a subunit size of -265 kDa [28]. Multifunctional ACC has also been characterized in a number of photosynthetic eukaryotes, firstly in the alga Cyclostella ciyptica and also in a variety of plant species, including brassica, maize, wheat, rice, pea, alfalfa, tobacco and arabidopsis [24,26]. T h e large-subunit forms of ACC in plants are homodimers with subunits of 220-240 kDa, and in most species examined, there is evidence for distinct cytoplasmic and plastid forms. De novo fatty acid synthesis occurs exclusively in the plastids of plants (which is also the site of expression of the ‘prokaryotic’ form of ACC when it is present). Two major isoforms of multifunctional animal ACC have so far been detected, and each may exist in one of two possible forms based on the presence or absence of a distinct motif. No animal species has yet been found which expresses a ‘prokaryotic’ form of ACC. The animal ACCs display subunit sizes of 265-280 kDa on denaturing gels, exist minimally as I997 I233 Biochemical Society Transactions I234 dimers under non-denaturing conditions and, unlike any other ACC described, are activated by di- and tri-carboxylic acids, which may induce aggregation into elongated polymers consisting of 5-20 dimers. The rest of this report will focus on a comparison of the properties of the two major forms of animal ACC, designated here as ACC-1 (for the 265 kDa or ACC-a isoform) and ACC-2 (for the 275-280 kDa or ACC-/? isoform). Properties of the major animal ACC isoforms Predicted sequences of ACC isoforms ACC-1 has been purified and characterized from a number of animal tissues, notably from liver, adipose tissue and mammary gland. Sequences of ACC-1 have now been deduced for the enzyme from chicken [29], rat [30], goat [31] and human [32]. ACC-2 has been recognized as a distinct isoform in heart [33], liver [34,35] and skeletal muscle [36], and the sequences of the two variants of human ACC-2 have been deduced [37,38]. The variant forms of ACC-1 and ACC-2 are caused, respectively, by the addition of eight amino acid residues beginning at Pro-1 196 and the deletion of 101 residues beginning at Arg1114 [38,39]. The genes for the human ACC-1 and -2 isoforms are located on distinct chromosomes (chromosomes 17q12 or 17q21 and 12q23 respectively) and show approx. 60% overall identity, ACC-2 exceeding ACC-1 in length by more than 100 amino acid residues. The two isoforms differ most at the N-termini, where residues 1-217 of ACC-2 correspond to residues 1-74 of ACC-1. The extension of ACC-2 near the N-terminus accounts for most of the difference in molecular size, and has been argued to provide a sequence with the potential to target ACC to mitochondria [37]. Many other specific sequence differences between ACC-1 and ACC-2 are scattered throughout the two sequences, as predicted on the basis of earlier comparative peptide analysis [35]. Among the sequences that are particularly well conserved in human ACC-1 and ACC-2 are several that have catalytic or regulatory significance, for example: (i) the motif AE(I/M)EVMKMIMT, which is essential for binding biotin, begins at Ala-780 of ACC-1 and Ala-924 of ACC-2; (ii) SEGGGGKGIRK, required for ATP binding, begins at Ser-313 of ACC-1 and Ser-456 in ACC-2; (iii) the sequence SFKRIMAPWAQTWTGRARLGGIPVGVI, is Volume 25 involved in acetyl-CoA binding, beginning at Ser1959 of ACC-1 and Ser-2095 of ACC-2; (iv) the sequence RSS(W/M)SGLHLVK, is a site for regulatory phosphorylation (of the underlined S), beginning at Arg-76 of ACC-1 and Arg-217 of ACC-2. Differential distribution of ACC isoforms in mammalian tissues Individual tissues express predominantly one isoform of ACC [34-36,401. The most dramatic pre-eminence of one ACC isoform is found in rat white adipose tissue, which expresses ACC- 1 exclusively [ 1,34,35]. In liver, brown adipose tissue, lactating mammary tissue, brain and pancreas, expression of ACC-1 exceeds that of ACC2 by a factor of 3-10 [34,40]. Heart and skeletal muscle are distinctive in that the expression of ACC-2 is 10 times that of ACC-1 [33,34,40]. The highest levels of ACC expression are found in lipogenic tissues such as white and brown fat, liver and lactating mammary gland. Assuming the specific activity of homogeneous ACC is approx. 20 unitslmg of protein, the expression of the enzyme in lipogenic tissues is in the range 50-250 pglg wet weight. In contrast, ACC expression in heart, skeletal muscle and pancreas is in the range 1-2 pglg wet weight of tissue. Regulation of animal ACC isoform expression Earlier classical studies had established that the turnover of ACC-1 in liver and adipose tissue had a half-life in excess of 48 h in animals that were fed normally on a typical chow diet [1,25]. Strong ACC-1 repression occurs in adipose tissue and liver in starvation, during feeding high-fat diets (including suckling in mammals) and in diabetes. In these situations, ACC-1 repression is reversed, respectively, by feeding low-fat diet (by weaning) or by insulin treatment. The regulation of ACC-1 expression shown by studies of protein turnover is reflected in appropriate changes in gene transcription as identified by studies of mRNA expression [4,41,42]. Comparison of the time courses for expression of mRNA and of protein suggest that there are important controls of message stability and/or of protein translation as well as control at the level of transcription [41,42]. Isoform analyses have indicated that the repression of ACC-1 and ACC-2 occurs in parallel in the liver during starvation and in experi- Molecular Aspects of the Regulation of Lipid Biosynthesis mental diabetes, but that cardiac and muscle ACC-2 is not significantly repressed [40,43]. In addition to the studies of diet and diabetes, a number of other model or developmental systems deserve close scrutiny, because they may shed important light on factors that may be critical in regulating ACC isoform expression in diverse physiological settings. For example, the differentiation of adipose cells from precursors, the onset of lactation in the mammary gland and myelination in the brain all represent developmental switches that are accompanied by large increases in ACC- 1 expression, coupled with repression of ACC-2 [ 1,25,41,42,44]. Analogous changes in ACC-2 expression occur during myodifferentiation and in the neonatal heart [43,45]. Specific hormones and intracellular gene regulatory mechanisms that account for the diverse aspects of control of ACC isoform expression are still poorly understood. It is likely that cardinal extracellular signals that play a role in regulating ACC expression during dietary modulation and diabetes include insulin, glucagon, catecholamines, thyroid hormones, steroid hormones and lactogenic hormones [41,42] as well as nutrients, notably glucose [42]. At the intracellular level, key regulatory elements that control the ACC genes are still being defined, and understanding of the relevant family of critical transcription factors is still emerging [4]. Post-tronslational regulation of animal ACC isoforms T h e ACC isoforms purified by avidin affinity chromatography from liver, adipose tissue, heart and skeletal muscle show broadly similar kinetic properties [33,34]. Both enzymes show similar substrate kinetics with respect to bicarbonate, ATP and MgZ+,although ACC-2 has a K , for acetyl-CoA approximately twice that of ACC-1. Both isoforms are markedly activated by citrate, with K , values in the millimolar range and V,,, values of 1-3 units/mg of protein. Both isoforms show similar sensitivity to inhibition by avidin, malonyl-CoA and palmitoyl-CoA. The sensitivity of ACC-2 to free CoA (which is a potent inhibitor of ACC-1) has not yet been tested. Citrate activation leads to marked increase in the molecular size of ACC-1 but so far there are no reports on the effects of citrate on the molecular size of ACC-2. The regulation of ACC-1 by reversible phosphorylation has been studied in considerable detail, and a number of critical ACC-1 phos- phorylation sites have been identified and the cognate protein kinases proposed [ 1-31. An important inhibitory phosphorylation site at Ser79 in rat ACC-1 is phosphorylated by AMP-activated protein kinase (AMP-PK). Additional sites at Ser-1200 and Ser-1215 may be phosphorylated by either AMP-PK or CAMP-dependent protein kinase (PKA), and although these latter two sites are phosphorylated more slowly in vitro [3,46], all three are occupied following elevation of cAMP levels in intact cells [l-31. Because another site for PKA (Ser-77) is not appreciably phosphorylated by increases in intracellular cAMP levels, it has been proposed that the AMP-PK is the principal inhibitory ACC kinase [46,47]. A somewhat different view of the relative importance of ACC-1 phosphorylation sites emerges from studies of the ACC-1 variant and of ACC-1 in which specific phosphorylation sites were altered by site-directed mutagenesis; these results indicate that phosphorylation of Ser-1200 also contributes importantly to inhibition of ACC-1 [39,48]. Like ACC-1, ACC-2 is a substrate for AMPPK and PKA in vitm but direct inhibition of ACC-2 activity has only been observed in the presence of the AMP-PK [35,49]. An important difference between the two ACC isoforms is that ACC-2 appears to be a far better substrate for PKA in vitro than ACC-1. This was first observed for the rat liver ACC preparation [3S] and has been confirmed using preparations of ACC-2 from rat heart and skeletal muscle [SO]. Is the phosphorylation of ACC-2 important physiologically? ACC-2 is rapidly inactivated in intact heart following ischaemia/reperfusion [S 11 and in skeletal muscle stimulated electrically or by exercise [52]. Under these conditions the inactivation of ACC-2 occurs in parallel with activation of AMP-PK, although a causal relationship has not yet been established. We have examined the effects of isoprenaline on intact cardiac ventricular myocytes and found that ACC-2 is rapidly phosphorylated at sites corresponding to the sites of purified ACC-2 phosphorylated by PKA [SO]. These observations are based on comparative phosphopeptide mapping; the sequences of ACC-2 phosphorylation sites have not yet been reported. The role of PKA in the regulation of ACC-2 may therefore be more significant than its role in the regulation of ACC1, a situation reminiscent of the distinct regulation of the hepatic and cardiac isoforms of phosphofructo-2-kinase. The molecular basis for the enhanced phosphorylation of ACC-2 by PKA I nn7 I235 Biochemical Society Transactions I236 has not yet been established. Interestingly, the Ser-1200/Ser-1215 motif is markedly different in the two isoforms and in ACC-2 does not appear to present a canonical PKA consensus phosphorylation site. This suggests that alternative and quite distinct sites for phosphorylation by PKA exist in ACC-2. T h e effects of insulin on ACC isoforms are likely to be complex, probably involving: (i) the activation of the phosphodiesterase-I11 isoform of cyclic nucleotide phosphodiesterase; (ii) the activation of protein phosphatase-1 or -2.4; and (iii) the activation of an ‘ACC-kinase’ that is able to phosphorylate the distinct, insulin-directed phosphorylation site of ACC-1 [l]. So far, no effects of insulin on ACC-2 have been demonstrated that persist with cell fractionation. Malonyl-CoA levels have been shown to increase in skeletal muscle [53] and heart [54] in the presence of glucose plus insulin, but, so far, no changes in activity of isolated ACC-2 have been found. Rather, it has been argued that increased flux through ACC-2 is promoted through insulin-mediated increases in citrate and/or acetyl-CoA [ZO]. A number of well-characterized protein kinases have been tested in the search for insulin-activated ‘ACC kinases’, but no identified protein kinases have been found that are able to phospholylate the insulin-directed site of ACC-1. Examples of protein kinases that have been tested include conventional isoforms of protein kinase C, casein kinases, CDKS and glycogen synthase kinase-3 ([l-31; and R. W. Brownsey, unpublished work). We have also explored the possible roles of three major classes of mitogenactivated protein (MAP) kinase as putative ACC kinases. Unlike the sea-star homologue [55], preparations of extracellular signal-related protein kinase (ERK)-1 purified to homogeneity from rat adipose tissue do not phosphorylate the appropriate insulin-directed phosphorylation site of ACC-1 and do not induce ACC activation. Moreover, in contrast with studies with isolated hepatocytes [56], exposure of fat cells to hypoosmotic extracellular media does not induce activation of ACC-1 or of fatty acid synthesis, even though the ERKs do become activated [57]. Indeed, insulin induces activation of fatty acid synthesis even when the activation of the ERKs is blocked in hyper-osmotic media [57]. MAP kinases related to the ERKs include p38/RK (the mammalian homologue of the yeast HOG-1 protein kinase) and the c-Jun N-terminal kinases Volume 25 (JNKs). We found no evidence for activation of p38/RK in rat white adipose tissue following insulin treatment, and although we did observe insulin-stimulated activation of JNKs, this did not correlate with activation of fatty acid biosynthesis [57]. T h e mechanism by which insulin activates ACC therefore remains poorly defined, although it does appear to require activation of phosphatidylinositol 3-OH kinase (PI 3-K), or a related protein sensitive to wortmannin [58]. Protein kinase B is one important target which acts downstream from PI 3-K but we found no evidence that this protein kinase acts directly on purified ACC-1 or ACC-2. As noted earlier, the regulation of ACC by insulin and other hormones may be dependent upon allosteric factors or other proteins as well as appropriate regulation of the phosphorylation of specific sites by hormones [59]. Conclusions T h e two isoforms of animal ACC so far described have distinct subunit structures, display subtle differences in kinetic properties and potentially important differences in regulation. T h e expression of the ACC isoforms is tissuespecific, ACC-2 being most evident in cells which do not carry out substantial de novo synthesis of fatty acids (the function for which ACC1 appears to be the dominant isoform). A number of dietary manipulations, hormone imbalances and developmental processes illustrate that the two ACC isoforms are regulated by distinct and complex mechanisms. It is becoming increasingly evident that malonyl-CoA plays significant roles, not only as a substrate for fatty acid biosynthesis, but also in the regulation of metabolic fuel selection, insulin secretion and formation of atypical fatty acids that may be critical for membrane architecture and function. These observations further underline the importance of gaining a full understanding of the structure, function and regulation of ACC isoforms. The work carried out in our laboratory and described in this report was supported by funds from The Medical Research Council of Canada and from The Canadian Diabetes Association (an award in the name of Dorothea Riddell Minnis). 1 Brownsey, R. W. and Denton, R. M. (1987) in The Enzymes: Control by Phosphorylation, Part B (Boyer, P. D. and Krebs, E. G., eds.), vol. XVIII, pp. 123-146, Academic Press, Orlando Molecular Aspects of the Regulation of Lipid Biosynthesis 2 Kim, K.-H., Lopez-Casillas, F., Bai, D. I I . , Luo, X. and Pape, M. E. 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Burnett Department of Biochemistry, University of Bristol School of Medical Sciences, University Walk, Bristol BS8 ITD, U.K. An important effect of insulin after a carbohydrate meal is to increase the conversion of glucose into fatty acids in fat, liver and mammary cells. Both short-term and long-term mechanisms are involved. A main interest of this laboratory for a number of years has been the short-term mechanisms involved in insulin signalling in rat epididymal fat cells, and this will be the subject of this brief article. Three different steps in the pathway are activated in parallel within 5 min of exposing these cells to insulin, and the overall result is a 10-fold increase in the rate of fatty acid synthesis. These steps are: glucose transport across the cell membrane, pyruvate dehydrogenase (PDH) in the mitochondria, and the cytoplasmic enzyme acetyl-CoA carboxylase (ACC) [l]. It is now becoming clear that different signalling pathways are involved although, as with other metabolic actions of insulin, important gaps in our knowledge remain. Signalling pathways involved in the activation of glucose transport, PDH and ACC by insulin Figure 1 summarizes the work of many different laboratories on the early events in insulin signalling [2-51. In essence, the binding of insulin activates the intrinsic tyrosine kinase activity of Abbreviations used: ACC, acetyl-CoA carboxylase; PDH, pyruvate dehydrogenase; ERK, extracellular signal-related protein kinase; EGF, epidermal growth factor. 'To whom correspondence should be addressed. Volume 25 the insulin receptor. This results in autophosphorylation of the receptor and then phosphorylation of intracellular proteins, including insulin-receptor substrate-1, and -2, SHC and GAB-1. T h e regions of these proteins that contain phosphotyrosine then form specific docking sites for a number of other proteins that contain SH2 domains. Important consequences are the activation of Ras and of PtdIns 3-kinase. In turn, these events lead to the activation of a number of protein kinases. T h e activation of Ras initiates the activation of a well-established kinase cascade leading to the stimulation of the mitogenactivated protein kinases ERK-1 and ERK-2. T h e activation of PtdIns 3-kinase results in an increase in the product PtdIns(3,4,5)P3, and it seems likely that this results in the activation of other protein kinases including protein kinase B (also known as RAC or akt) and p70 S6 kinase. PtdIns(3,4,5)P3 may directly influence protein kinase B by binding to the P H domain in the kinase, but it seems that its main effect may be to activate other kinases (PtdIns(3,4,5)P3dependent kinase-1 and -2), which in turn phosphorylate and activate protein kinase B [6]. Downstream of protein kinase B may lie a number of important enzymes and other proteins involved in the metabolic actions of insulin. These may include glycogen synthase, because protein kinase B is able to phosphorylate, and hence inhibit, GSK-3 (the kinase that phosphorylates the main inhibitory sites in glycogen synthase) [7]. Also downstream of protein kinase B may be p70 S6 kinase, but not as a direct substrate [8].