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SMU-DDE-Assignments-Scheme of Evaluation PROGRAM SEMESTER SUBJECT CODE & NAME BK ID DRIVE MARKS BSC BIOTECHNOLOGY 3 BO 0048 GENETICS B0763 WINTER 2014 60 Q. No Criteria 1 A Marks Answer the following Explain supplementary and lethal interaction of genes with suitable example. section 3.3 & 3.4;Page 51-52) Explaining Supplementary interaction of genes: Supplementary genes are two independent pairs of dominant genes, which interact in such a way that one dominant gene will produce its effect whether the other is present or not. The second dominant, when added, changes the expression of the first one but only in the presence of first one. Example: inheritance of coat colour in Rats: 5 In rats and guinea pigs, coat colour is governed by two dominant genes A and C, the agouti coloured guinea pigs have genotype CCAA. The black rat possesses gene for black colour (C) but not the gene (A) for agouti color. If gene for black colour is absent agouti is unable to express itself and rats with a genotype ccAA are albino. Here the presence of gene C produced black colour and addition of gene A changes its expression to agouti colour. The result is 9 agouti : 3 black : 4 albino. Lethal interaction of genes: Genes may affect viability as well as the phenotypic traits of an organism. Experiments have shown that animals carrying certain genes cause impaired biochemical as well as physical functions. Some genes do not affect the appearance of an Total Marks (Unit 3;Sub- 10 SMU-DDE-Assignments-Scheme of Evaluation 2 A organism but do influence viability. Some genes have such serious effects that the organism is unable to live. These are called lethal genes. If the lethal effect is dominant, all individuals carrying the genes will die and the gene will be lost. Some dominant lethals have delayed effect so that the organism lives for a time. Recessive lethals carried in the heterozygous condition have no effect but may be expressed when cross between two carriers occur. Example: Creeper chickens The dominant gene ‘C’ in chickens is responsible for developmental changes that result in aberrant forms called ‘Creepers’ and the homozygous genotype ‘CC’ is lethal. These birds have short, crooked legs and are of little value. When two creepers were crossed, a ratio of 2 Creepers to 1 normal instead of 3:1 appeared. This is the characteristic ratio for lethal interactions. The creepers are heterozygous Cc and the missing ¼ individuals were CC. The creeper gene in homozygous condition produces severe malformations that the offsprings die during incubation. Describe the mechanism and kinds of crossing over. The mechanism of crossing over includes following steps: 1. Synapsis During prophase – 1 of meiosis the maternal and paternal chromosomes of a homologous pair come close together and pair at zygotene stage. This pairing is called the synapsis. The homologous chromosomes pair precisely by mutual attraction between the allelic genes. The paired chromosomes are called bivalents. 2. Duplication During diplotene stage of meiosis, each of the homologous chromosomes in a bivalent splits longitudinally into two sister chromatids. Thus the bivalent now consists of four chromatids and is known as tetrad. 5 (Unit 4;Section 4.3;Page 68-76) 10 SMU-DDE-Assignments-Scheme of Evaluation 3. Crossing over During diplotene stage, when the paired chromosome start separating, the chromatids remain in contact at one or more points. These points of contacts are known as chiasmata. At each chiasma two non-sister chromatids of the bivalent break at the corresponding points and then rejoin with the exchange of segments. 4. Terminalization After crossing over, the non-sister chromatids start repelling each other. The chromatids separate from the centromere towards the tip. The chiasmata also start moving in zipper-like fashion towards the ends. The movement of chiasmata is known as terminalization. Explaining the kinds of crossing over: Depending upon the number of chiasmata crossing over can be of the following types : 1. Single crossing over When only one chiasma is formed all along the length of a chromosome pair, it is known as single crossing over. The chromatids of homologous chromosomes contact and break only at one point along their entire length 2. Double crossing over In double crossing over, chromatids break and rejoin at two points. In double crossing over two chiasmata are formed along the entire length of the chromosome. They can be further divided as: a) Two strand double cross overs In this kind of crossing over, the same two chromatids are involved at both the crossing over points. The chiasmata thus formed are known as reciprocal chiasmata. As a result of this, two chromatids are noncrossovers and preserve the parental combination of genes. b) Three strand double cross overs In these crossovers, three chromatids are involved, i.e. the second chiasma contains one of the same chromatid, which has crossed at first chiasma but the other chromatid is different. 5 5 SMU-DDE-Assignments-Scheme of Evaluation Here only one chromatid is non-cross over, while the other three exchange their parts. c) Four strand double cross overs In such cross overs all the four chromatids of the tetrad are involved, two of them exchange parts at first chiasma and the other two are involved in the second chiasma. Such chiasmata are known as complementary chiasmata. These produce four single crossovers. 3. Multiple Crossovers When crossing over occurs at more than two places in the same chromosome pair and more than two chiasmata are formed, this type of crossing over is known as multiple crossing over. 3 A Describe sex linked inheritance with an example. Sex chromosomes (XX – XY) are primarily concerned with the determination of sex but they also carry genes for other body characters. Such traits whose genes are located on the sexchromosomes and follow sex during inheritance are known as sex linked characters. The genes responsible for these traits are termed sex linked genes and their mode of inheritance is described as sex linked inheritance. The sex linked inheritance can be X-linked or Ylinked inheritance. The most popular examples of sex linkage in man are (i) Haemophilia (ii) Color blindness (iii) Myopia (iv) Mitral stenosis (v) Juvenile glaucoma and (vi) Muscular dystrophy. X-linked inheritance: Red green color blindness: Color perception is controlled by the cones in the retina. The genes for the cone proteins are located in the X chromosome. The red blindness is called protanopia and the green blindness deutoranopia. Colorblindness is caused by X-linked recessive gene. When a normal woman marries a colorblind man, all her sons and daughters have normal color vision, but when the daughters are married to man with normal color vision some colorblind sons are produced. If a colorblind woman is married to a normal (Unit 5;Section 5.2;Page 106-110) 10 10 SMU-DDE-Assignments-Scheme of Evaluation man, all her sons are colorblind whereas all the daughters have normal color vision. When these daughters having normal color vision are married to a colorblind man, the colorblind grandsons and granddaughters are produced. It is observed that a color blind woman has sons all colorblind and daughters all with normal vision and a colorblind woman always has a colorblind father and her mother is a carrier. Following conclusions were drawn from the above results. 1) Color blindness is more common in males than in females. 2) Two recessive genes are needed for the expression of color blindness in female, whereas only one gene gains expression in male. 3) Males are never carriers 4) Colorblind women always have colorblind fathers and always produce colorblind sons. 5) Colorblind women produce colorblind daughters only when their husbands are colorblind. 6) Women with normal color vision, whose fathers are colorblind, produce normal and colorblind sons in approximately equal proportion. Y-linked inheritance: The genes in Y chromosome in man are exclusively transmitted through the male line. These traits are also called holandric traits, the genes, holandric genes and the inheritance as holandric inheritance. The genes for hairy pinna is example for Ylinked genes. The sex determining genes such as H – Y and TDF are located in Y chromosomes. 17 genes are found to be present in the Y chromosome of man. 4 A Explain in detail the factors that alter the gene equilibrium. Mutation: Mutation introduces new genes leading genetic differences in the population. These new genes introduced may or may not (Unit 7;Section 7.4;Page 165-170) SMU-DDE-Assignments-Scheme of Evaluation persist in the population upon their utility. The gene frequencies will also depend upon this factor. Example: If a dominant gene ‘A’ mutates to ‘a’, then frequency of ‘a’ will replace ‘A’. Quantitatively, let po be the initial frequency of ‘A’ and ‘u’ be the mutation rate with which ‘A’ changes to ‘a’. In such a case, ‘a’ will appear with a frequency of u x po in the first generation. The frequency of ‘A’ will, therefore be reduced by a factor pou and become po – pou = po (1 – u). In the next generation there will, therefore, be further change due to the change of A to a, thus further reducing the frequency of A by a factor po (1 – u) – po (1 – u) x u = po (1 – u) (1 - u) = po (1 – u) 2. In this manner, in ‘n’ generations, the frequency of A will be reduced to po (1 – u) n. Eventually the term (1 – u)n will approach zero so that A will disappear after several generations, if no reverse mutation takes place and the mutant allele experiences no selection pressure against it. Selection The gene frequencies may change due to selection in favour of one of the two alleles of a gene. For example, if individuals with allele ‘A’ are more successful in reproduction than the individuals with a, the frequency of the former will be higher. The selection can be artificial or natural. The factors influencing selection may include temperature, humidity, food, sexual attractions, etc. There are several aspects of selection, like fitness, gametic selection and zygotic selection. When one genotype can produce more offspring than the other in the same environment, it means relative reproductive success, called fitness or adaptive value or selective value Migration Through migration, new alleles can be introduced into a population from nearby population. Let us consider a large continental population donating individuals (genes) to a small island 10 10 SMU-DDE-Assignments-Scheme of Evaluation 5 A population. The rate of migration is ‘m’, which is equal to the fraction of genes on the island that are replaced by genes from the continent each generation. If qi is the frequency of a particular allele ‘a’, on the island, and qc is the corresponding frequency on the continent, then after migration, the frequency on the island will be qi = (1 – m) qi + mqc. The change in the frequency of ‘a’ in one generation will therefore be qi = qi’ – qi = m (qc – qi) ; qi will become zero either when migration stops (m = 0) or when the frequency of ‘a’ on the island equals the frequency of ‘a’ on the continent (qi = qc). The deviations in gene frequencies will also be due to sampling errors. Describe inheritance of shell coiling trait in Limnaea peregra as an example for non-Mendelian inheritance. (Unit 9;Section 9.2;Page 195-197) The direction of coiling in shells of the snail Limnaea peregra is one of the best examples of a maternal effect (non-mendelian inheritance). Some strains of Limnaea peregra have dextral shells, which coil to the right; others have sinistral shells, which coil to the left. This characteristic is determined by the genotype of the mother (not her phenotype) rather than by the genes of the developing snail. Allele S+ for right handed coiling is dominant over allele S for coiling to the left. When crosses were made between females coiled to the right and males coiled left, the F1 snails were all coiled to the right. The usual 3: 1 ratio was not obtained in the F2 because the phenotype SS was not expressed. Instead, the pattern determined by the mother’s (P) genes (S+S+) was expressed in the F1, and the F1 mother’s genotype (S+S) was 10 10 expressed in the F2. When individuals were inbred, only progeny that coiled to the left were produced. When the S+S+ or S+S snails were inbred, however, they produced offspring that all coiled to the right. From the reciprocal crosses between left-coiling females and right-coiling males, all F1 progeny SMU-DDE-Assignments-Scheme of Evaluation were coiled to the left. The F2 all coiled to the right; but, when each F2 snail was inbred, those with the genotype SS produced progeny that coiled to the left. Further investigation of coiling in snails has 6 A shown the spindle formed in the metaphase of the first cleavage division influences the direction of coiling. The spindle of potential ‘dextral’ snails is tipped to the right, but that of ‘sinistral’ snails is tipped to the left. This difference in the arrangement of the spindle is controlled by the genes of the mother. They determine the orientation of the spindle, which in turn influences further cell division and results in the adult pattern of coiling. The actual phenotypic characteristic, therefore, is influenced directly by the mother, with no immediate relation to the genes in the egg, sperm or progeny. Explain genetic disorders related to blood group incompatibilities. (Unit 6;Section 6.3;Page 142-153) Blood group Incompatibilities and Related Diseases Blood type incompatibility occurs when a person's immune system manufactures antibodies that attack the antigens not on his or her cells. A person with blood type A, for example, has antibodies against type B antigen. If he or she is transfused with type B blood, the anti-B antibodies cause the transfused red blood cells to clump and block circulation. ABO blood type is often followed by a 'positive' or 'negative', which refers to another blood group antigen, the Rh antigen. If one has Rh antigen he or she is Rh positive and if not he or she is Rh negative. This is determined by alleles of three genes called C, D and E. The Rh antigen was originally identified in rhesus monkeys, hence named Rh. SMU-DDE-Assignments-Scheme of Evaluation The Rh blood group incompatibilities is the result when a woman who is Rh negative marries a man who is Rh positive, the first born child of such a marriage is usually normal. During the following pregnancies the fetus may be lost by still birth or it may be born in such an anemic or jaundiced state that it lives only a few hours or days after birth. The infant dies from Erythroblastosis fetalis, a condition of anemia due to the breakdown of RBC (haemolysis) in the fetus and jaundice. The blood vessels in the liver become clogged with the broken RBCs and is termed haemolytic jaundice. This is in response to destruction of baby's RBC by the maternal Rh antibodies. In this condition a newborn infant may be given blood transfusion to replace the blood with damaged RBCs as well as Rh immunoglobulin (Rhogam) is given to the mother within 36 hours of delivery of child. This will destroy the fetal red cell and prevents Rh sensitization. 10 10 *A-Answer Note –Please provide keywords, short answer, specific terms, specific examples (wherever necessary) **********