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NCEA Level 3 Biology (90715) 2012 — page 1 of 3 Assessment Schedule – 2012 Biology: Describe the role of DNA in relation to gene expression (90715) Assessment Criteria Q ONE Achievement Merit Excellence Describes transcription. • Transcription is where the DNA is opened and free nucleotides attach making to the mRNA strand via base pairing. Describes translation. • Attaching to a ribosome, where the codons are matched to tRNAs carrying amino acids in translation. • The amino acids are joined via peptide bonds to produce a peptide chain. Describes one way that the faulty myostatin gene may cause a change in phenotype. • The faulty gene produces the wrong code for transcription, so the mRNA is wrong. • The mutated gene cannot produce the right protein. • Frameshift in mRNA from transcription will not be translated translated correctly. Explains how transcription is affected by deletion in the myostatin gene. • The loss of 11 base pairs / deletion mutation means the DNA base sequence / triplets is changed / causes a reading frameshift, so that the nucleotides that make the RNA (codon) are now in a different sequence / codons the RNA sequence may now contain a premature stop codon. Explains how translation is affected by deletion in the myostatin gene. • The RNA sequence (codon) is changed / mutated sequence / incorrect order which affects formation of the amino acid chain / polypeptide chain at the ribosome. • Different tRNAs match from the deletion point, bringing a different arrangement of amino acids. A stop codon may have been produced prematurely, which stops translation and results in a shortened polypeptide chain. Explains how the faulty gene can cause changes to the expression of phenotype. • Change in the DNA code has an effect on the order of amino acids / polypeptide chain, which will change the shape / structure / phenotype / activity of the myostatin protein. • Change in DNA / mRNA code has an effect on the final protein shape which will effect phenotype / activity of myostatin protein. Discusses how a deletion mutation in myostatin can affect gene expression AND links a change in phenotype in Belgian Blue cattle to its significance for breeders. • As the DNA sequence has 11 base pairs deleted / mutated this will change the order of base pairing (concept of codons shifted because of deletion / mutation) as the RNA is synthesised during transcription. This will affect the final mRNA product, changing the codon sequence (shortening the RNA possibly disrupting a section of coding RNA / exon). During translation, the amino acid sequence of the polypeptide will change (in this case shortened to 288 amino acids instead of 376). This can mean that the final protein will not fold properly / will be the wrong shape / wrong structure and the active sites / ability to connect with other proteins will be blocked, so that the protein cannot act to regulate muscle development. A = 2 × a statements M = 2 × m statements E=1×e Farmers could breed cattle with the faulty myostatin gene to produce cattle with greater meat production than other breeds and greater value per head of cattle. (May also mention that the double muscled cattle could have health and reproductive issues). NCEA Level 3 Biology (90715) 2012 — page 2 of 3 TWO Role of the repressor molecule is described. Eg, the repressor molecule binds to the operator and stops transcription / prevents RNA polymerase binding Control function of the operon is described. Eg, the operon acts as a switch to allow transcription of mRNA / production of proteins / enzymes. Describes the overall role / importance of the operon. Eg, the operon allows bacteria to break down lactose when it is present. Eg, important for conservation of energy for bacterium. Explains the roles of the inducer and the repressor in the function of the operon. The repressor binds to the operator so RNA polymerase cannot bind and transcription is blocked. When an inducer is present (lactose) it binds to the repressor and inactivates it / causes it to move off the operator site. The operator region is open, RNA polymerase can now bind to the promotor and transcription happens. Lactose digesting enzymes / proteins can be made. A = 2 × a statements M = 2 × m statements Explains that the action of the operon means the bacteria do not have to produce enzyme all the time. Eg, the bacteria will only produce enzymes / proteins when lactose is present, instead of producing it all the time therefore saving energy for the bacterium. Provides an in-depth explanation of the role of the repressor and inducer in lactose digestion. The repressor binds to the operator so RNA polymerase cannot bind and transcription is blocked. When an inducer is present (lactose) it binds to the repressor and inactivates it / causes it to move off the operator site. The operator region is open, RNA polymerase can now bind to the promotor and transcription happens. Lactose digesting enzymes can be made. As the lactose is removed / broken down the inducer disappears and the repressor is again activated, so it binds again to the operator, blocking further transcription. AND Discusses the importance of the operon mechanism to the E. coli bacterium. Eg, lactose acts as the inducer to prevent the repressor binding. The importance of this is that the mechanism for enzyme production is only switched on in the presence of lactose, which ensures the food supply is digested but avoids unnecessary enzyme production when the substrate is absent / operon is efficient and saves energy. E=1×e NCEA Level 3 Biology (90715) 2012 — page 3 of 3 THREE • Describes the genotypes as PPcc for the white seed and ppCC for the red seed. AND Completes a Punnett square with no errors that shows why all offspring must be PpCc genotype. OR Describes the genotypes as PPcc for the white seed and ppCC for the red seed. AND Correct description of why offspring has PpCc genotype. Eg, offspring will be PpCc because one parent has given them Pc and the other parent has given them pC. • Describes a metabolic pathway. Eg, series of chemical reactions OR through an annotated diagram. Produces evidence for the outcome and explains the outcome as a gene interaction and result from a metabolic pathway. Purple C-PWhite ccPRed C-pp Only C allele will allow colour expression. Then only P allele will convert / make to purple / pigment. In this case for all purple seeds to be produced by a white-seeded and red-seeded plant, there must have been two dominant alleles present for each of C and P genes. This is an example of a gene interaction (epistasis / supplementary) where the expression of one gene will effect the expression of another gene Metabolic pathway is defined or represented by a diagram Eg, series of chemical reactions where one product / substrate is the starting molecule (precursor) for the next reaction (intermediate / final product). • Describes the outcome as an interaction between two genes (epistasis / supplementary). A=2×a M=1×m Uses Punnett square / explanation to derive a diagram used to discuss the outcome from the gene interactions (in terms of dominant and recessive alleles and their action on converting precursor molecules into intermediate and final products). Eg (Gene C ) Enzyme C White (__cc) → expression Precursor Intermediate (Gene P) Enzyme P purple / red (P_ C_) / red (pp C _) final product Dominant C allele required to convert colourless precursor into pigmented intermediate. Dominant P allele required to convert pigment into purple. If P allele is not present / mutant / recessive, red only will be expressed. If c / recessive allele is present / C allele is absent, no colour will be expressed at all, regardless of presence of P allele. This is an interaction between genes (called epistasis / supplementary interaction) where the expression of one gene will effect the expression of another gene. AND Metabolic pathway is defined or represented by a diagram Eg, series of chemical reactions that are controlled by enzymes where one product / substrate is the starting molecule (precursor) for the next reaction (intermediate / final product). E=1×e Judgement Statement – 2012 Achievement Achievement with Merit Achievement with Excellence 2A 2M 2E