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Cell Structure and Transport Biology Content Standards 2. Cell Biology Broad Concept: Cells have specific structures and functions that make them distinctive. Processes in a cell can be classified broadly as growth, maintenance, and reproduction. 2.1 Relate cell parts/organelles (plasma membrane, nuclear envelope, nucleus, nucleolus, cytoplasm, mitochondrion, endoplasmic reticulum, Golgi apparatus, lysosome, ribosome, vacuole, cell wall, chloroplast, cytoskeleton, centriole, cilium, flagellum, pseudopod) to their functions. Explain the role of cell membranes as a highly selective barrier (diffusion, osmosis, facilitated diffusion, and active transport). 2.2 Compare and contrast, at the cellular level, prokaryotes and eukaryotes (general structures and degrees of complexity). 2.8 Compare and contrast a virus and a cell in terms of genetic material and reproduction. Biology Content Standards 4. Anatomy and Physiology Broad Concept: There is a relationship between the organization of cells into tissues, and tissues into organs. The structure and function of organs determine their relationships within body systems of an organism. Homeostasis allows the body to perform its normal functions. 4.7 Recognize that communication between cells is required for coordination of body functions. The nerves communicate with electrochemical signals; hormones circulate through the blood, and some cells produce signals to communicate only with nearby cells. The Cell Theory • All living things are composed of cells. • Cells are the basic units of structure/ function in living things. • All cells come from preexisting cells. Key Scientists • Anton van Leeuwenhoek ________________ • Robert Hooke ________________ • Robert Brown ________________ • Matthias Schleiden ________________ • Theodor Schwann ________________ • Rudolph Virchow ________________ Anton van Leeuwenhoek Father of microscopy Robert Hooke Robert Brown Coined the term “cell” Discovered the nucleus Robert Brown's Microscope This instrument is preserved at the Linnaean Society in London. This is the view Brown obtained in 1828, when he first recognized the cell nucleus. It shows about twenty orchid epidermal cells, and the nucleus can clearly be seen within each cell. Three stomata can also be clearly seen these are the breathing pores through which a plant exchanges gases with the atmosphere Schleiden “All plants are made of cells.” Schwann “All animals are made of cells.” Rudolph Virchow “All cells arise from the division of preexisting cells.” Virchow rejected the ancient idea that disease was an affliction of the entire body. “Disease, said Virchow, was the result of a cellular alteration”. He made important contributions to our understanding of blood coagulation, atherosclerosis, leukemia, and other cancers. Cell Structure Cells come in many sizes and shapes! Great Examples of Cell Structure-Function • Ovum (Egg ) • Sperm cell • Neuron • Skeletal Muscle Cell • Fat cell • Leaf epidermis Cells Ovum & Spermatozoa Neuron Skeletal Muscle Cells Fat Cells Leaf Epidermis Protist - Amoeba pseudopod Bacteria - Anthrax Prokaryotes vs. Eukaryotes Prokaryotes - Organisms that lack a nucleus - Usually small and unicellular - Bacteria Eukaryotes Organisms whose cells contain a nucleus and membrane-bound organelles.. Structures common to most Cells … Cell Membrane The membrane is like “the guard at the door!” Cell Wall • Supports and protects the cell • Lies outside the cell membrane • Pectin: gluey substance which holds plant cells together: jelly • Plants: cellulose • Fungi: chitin • Algae: varies… • Some bacteria: peptidoglycan Cell Wall Primary cell wall: composed of cellulose, which provides elasticity Secondary cell wall: found in plants that have woody stems cellulose + lignin Cell Wall (Pectin) Nucleus “Control center” • Contains DNA, which, in eukaryotes, is attached to special proteins forming chromosomes. • Surrounded by 2 membranes, which form the nuclear envelope. The nuclear envelope has nuclear pores, which conduct traffic in and out. • Nucleolus - composed of RNA and proteins - site of ribosome production Nucleus Nucleolus DNA Nuclear Envelope Nuclear Pore Nucleolus Chromatin Ribosomes Proteins are made here! Some are attached to membranes. Others are free in cytoplasm. Cytoplasm Cytosol (water with free-floating molecules) + organelles Cell Organelles Mitochondria change the chemical energy stored in food into compounds that can be used by the cell (ATP). – 2 membranes – Contain DNA Cell Respiration takes place here! Cristae Matrix Chloroplasts (plant cells and algae) trap the energy of sunlight and convert it into chemical energy (sugars and starches). Have 2 membranes. Contain DNA. Photosynthesis takes place here! Endoplasmic Reticulum (ER) System of little tubes and sacs which transports materials within the cell. • Rough Endoplasmic Reticulum (RER): ribosomes stuck to its surface. Many proteins that are released from the cell are made here. • Smooth Endoplasmic Reticulum (SER): NOT covered with ribosomes. In some cells, special enzymes and chemicals are stored here. Golgi Apparatus Modifies, collects, packages, and distributes proteins made at one location in the cell and used at another. Lysosomes • Membrane sac of enzymes formed by the Golgi apparatus. • Digest food and clean up/recycle • Rarely found in plants small food particle lysosomes vacuole digesting food digesting broken organelles Vacuoles – sacs which store materials such as water, salts, proteins, and carbohydrates. Plant cells – single, large vacuole filled with liquid. Plastids: Plant organelles that come in a variety of forms. Many store food and pigments. • Chloroplasts … • Leucoplasts – store starch granules. • Chromoplasts – store pigment molecules. Leucoplasts from Potato Cells Chromoplasts from Red Pepper Cells Cytoskeleton A network of protein fibers in the cytoplasm that gives shape to a cell, holds and moves organelles, and is involved in cell movement. Types of Protein Fibers Cilia and Flagella Hair like organelles that extend from the surface of the cell. They help with movement. Made of microtubules. Cilia – short and present in large numbers. Flagella – long and less numerous. Euglena Flagellum Sperm Flagellum Cilia Respiratory tract A Protist Centrioles Found in most eukaryotic cells; absent in higher plants and most fungi. Nine triplets of microtubules arranged in a very special way. When two centrioles are found next to each other, they are usually at right angles. The centrioles are found in pairs and move towards opposite ends of the nucleus when it is time for cell division. During division, centrioles create spindle fibers. Plant Cell Levels of Organization Cell Communication • Direct cell-cell contact Some cells can form gap junctions that connect their cytoplasm to the cytoplasm of adjacent cells. (Ex) cardiac muscle • Neurotransmitters Nerves communicate with electrochemical signals. • Hormones Hormones are produced by endocrine cells and travel through the blood to reach all parts of the body. Cell Transport Transport By Passive Processes (No Energy Needed) Diffusion - movement of molecules from a region of higher concentration to one of lower concentration. Example: Aromas of food. Oxygen and carbon dioxide pass easily through the cell membrane because they can dissolve in lipids. http://www.teachersdomain.org/asset/tdc02_int_membraneweb/ Rate of diffusion is a function of: • Size and shape of the molecules • Electric charges of the molecules • Temperature and pressure • Concentration gradient Concentration gradient – the difference in concentration of molecules of a substance from the highest to the lowest number of molecules. Molecules of a substance that are moving from areas of high concentration of that substance to areas of low concentration are moving WITH the concentration gradient. The steeper the grade from high to low, the more rapid the diffusion rate. Transport By Passive Processes (No Energy Needed) Osmosis – diffusion of water through a selectively permeable membrane. Water moves from high water potential to low water potential. The cell has NO CONTROL over osmosis! Water will flow in and out of the cell until the concentration is equal on each side of the membrane. This is called EQUILIBRIUM. Animal Cells Hypotonic Cytolysis Hypertonic Crenation To Review … Cytolysis No net movement of H2O Crenation Plant Cells Turgor Pressure Plasmolysis Cytolysis Turgor pressure No NET movement Crenation Plasmolysis Transport By Active Processes Use of Carrier Molecules (PERMEASES) – proteins in the cell membrane 1. FACILITATED DIFFUSION – transport by permeases down or with the concentration gradient. Example = glucose transport 2. ACTIVE TRANSPORT – transport by permeases against the concentration gradient. The cell needs ATP! Example = Na+ K+ pump http://www.brookscole.com/chemistry_d/templates/student_resources/shared_resources/animations/ion_pump/ionpump.html Facilitated Diffusion Glucose transport Active Transport Transport By Active Processes Endocytosis – into the cell – needs ATP 1. Phagocytosis – cell-eating. Example: amoeba using pseudopod ! 2. Pinocytosis – cell drinking. Exocytosis – out the cell – needs ATP Endocytosis Phagocytosis The cell membrane pulls in and pinches off placing the solid particles in a phagosome. The phagosome then fuses with a lysosome and the material is broken down. “Cell EATING” Endocytosis Pinocytosis The cytoplasmic membrane pulls in and pinches off placing small droplets of liquid in a pinocytic vesicle. The liquid contents of the vesicle is then slowly transferred to the cytosol. “Cell DRINKING” Exocytosis Endocytosis & Exocytosis Receptor-Mediated Endocytosis Endocytosis in which specific molecules become bound to specific receptors on the cell surface and subsequently enter the cytoplasm enclosed in special vesicles. • Receptor-mediated endocytosis is used by animal cells to take cholesterol up from the blood via low-density lipoprotein (LDL) particles. • The LDL receptor proteins are concentrated in depressed regions of the membrane known as clathrin coated pits because they are coated with a layer of a protein called clathrin. • After the LDL particle binds to the receptor protein, the coated pit invaginates forming a coated vesicle. LDL particles bind to specific LDL receptors in coated pits of the cytoplasmic membrane. The coat on the inner surface of the membrane is a layer of a protein called clathrin. A coated vesicle forms by endocytosis. The clathrin coating detaches from the vesicle and is recycled back to the cytoplasmic membrane. The uncoated vesicle is called an endosome. The endosome divides forming two vesicles. One vesicle recycles the LDL receptor proteins back to the cytoplasmic membrane. The other vesicle fuses with lysosomes. After the vesicle fuses with the lysosome, the contents are digested and free cholesterol is released into the cytosol. Viruses How Big are Viruses? What is a Virus? Viruses are particles of nucleic acid, protein, and in some cases lipids that can reproduce ONLY by infecting living cells. They are NOT living things! Viruses differ widely in size and shape. Viruses are usually classified based on their genome. Retrovirus = RNA-based virus. Viral Structure A typical virus is composed of a core of either DNA or RNA, surrounded by a protein coat, or capsid. Many animal viruses form an envelope around the capsid. The envelope is rich in proteins, lipids, and glycoproteins. Most of the envelope is from the host cell’s membrane and serves as an attachment site Genome • DNA or RNA • DNA - linear or circular, double or single stranded • RNA - single or double stranded The protein coat, or capsid provides: • protection • attachment • identity • immunity Viral Replication • Lytic • Lysogenic Bacteriophage Life Cycle of a Bacteriophage Lytic Replication Lysogenic : A host cell lives normally, but is harboring a viral genome (prophage) within its own genome. Lysogenic