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Final Exam Review Honors Key– June, 2014 (Chapters - 8, 9, 12, 11, 14, 15, 16, 17, 3, 4, 5, 6) Chapters 8 & 9 1. What is the energy source in all cells? ATP 2. When a phosphate group is removed from ATP, what is released? Energy Removing this phosphate group from ATP creates ADP 3. Cellular respiration releases energy by breaking down food/glucose molecules. Cellular respiration occurs in all eukaryotic cells. 4. Write the balanced equation for cellular respiration below: C6H1206 + 602 6CO2 + 6H20 + Energy 5. List the 3 stages of cellular respiration in order. a. glycolysis b. Kreb’s cycle c. electron transport chain 6. Where does glycolysis take place in the cell? Cytoplasm Where does cellular respiration take place in the cell? Mitochondrion 7. How many ATP molecules does glycolysis YIELD? 2 How many ATP molecules are gotten from cellular respiration? 36 8. Cellular respiration is considered an aerobic process because it requires presence of oxygen. An anaerobic respiration does not. 9. What is the name of the anaerobic breakdown of glucose? Fermentation 10. What are the two main types of fermentation? alcoholic and lactic acid 11. Where does lactic acid fermentation occur in animals? Muscles. What does it cause? pain and burning 12. What type of fermentation occurs in bread dough? Alcoholic 13. What is the balanced equation for photosynthesis? 6CO2 + 6H20 + Energy C6H1206 + 602 14. What organelle captures sunlight in plants? Chloroplast 15. What pigment gives green plants their color? Chlorophyll 16. Most plants appear green because chlorophyll does not absorb green light. 17. What gas is produced as a by-product of photosynthesis? Oxygen 18. In the Figure 8-6 The light dependent reaction uses light energy to produce ATP and oxygen (as a waste product). It occurs in the thylakoids of the chloroplast. The light-independent reactions use the ATP from the light-dependent reactions, carbon dioxide and water to produce high energy sugars (glucose). It occurs in the stroma of the chloroplast. It is also known as the Calvin cycle. What structure is shown below in Figure 8-6 – Chloroplast Figure 8-6 Comparison of Photosynthesis and Respiration Raw Materials Products Purpose Photosynthesis water and CO2 glucose and oxygen store energy Respiration glucose and oxygen water and CO2 release energy 19. The process of photosynthesis and respiration can be thought of as a cycle because -the products of one are used as the raw materials of the other Plants 20. The plants that have flowers are called as Angiosperms 21. The plants that do not have fruit that covers the seeds are called as Gymnosperms 22. The female reproductive part of the flower is called as Pistil and the male reproductive part of the flower is called as Stamen (it contains Pollen) 23. What is the purpose of xylem? vascular tissue made of dead plant cells that transports water and dissolved minerals 2 24. What is the purpose of phloem? vascular tissue made of living cells that transports sugars synthesized in the leaves to other parts of the plant. 25. Phototropism: Plants respond to light by bending towards it. 26. Geotropism: Plants respond to gravity (stem goes upwards & roots go downwards). 27. Thigmotropism: Plants respond to touch (Vines develop tendrils that coil around support). Chapter 12 Identify the names of the scientists who discovered the following: Griffith - Used mice to see how a bacteria caused disease (transformation of harmless bacteria into disease causing ones) Avery - Destroyed all cell products but DNA to find what genes are made of Hershey and Chase - Radioactive viruses used to show DNA is molecule of heredity Chargraff - % of “A” = % of “T” and the % of “C” = % of “G” Rosalind Franklin - Discovered the shape of DNA through x-ray diffraction Watson and Crick - discovered double helix- 3 dimensional shape & structure of DNA Figure 12-1 1. The structure labeled X in Figure 12-1 is a(an) nucleotide (monomer). Monomers connect to form nucleic acid which is a polymer. 2. What does DNA stand for? Deoxyribonucleic acid 3. In DNA molecule nitrogen bases (C & G and A& T) are held together by hydrogen bonds. 4. The Watson and Crick model of DNA is a(an) double helix, in which two strands are wound around each other. 3 5. In eukaryotes, DNA is located in the nucleus 6. During DNA replication, a DNA strand that has the bases CTAGGT produces a strand with the bases GATCCA 7. A change in a DNA sequence that affects genetic information is mutation. 8. What are the four main types of chromosomal mutations and what happens during each? inversion – a piece breaks off and attaches in the reverse order duplication – a piece of a chromosome is copied deletion – a piece of a chromosome is left out translocation – a piece of a chromosome breaks off and attaches to another chromosome 9. The process of transferring information from DNA to RNA is called transcription. 10. The process of transcription takes place in the nucleus. 11. During transcription, DNA serves as a template for producing mRNA, which leaves the nucleus. mRNA carries coded instructions from DNA to ribosome. Figure 12-3 12. In Figure 12-3, A, B, and C are three types of RNA. 13. Which process changes the mRNA base sequence into the amino acid sequence for protein synthesis? Translation 14. Which organelle makes proteins when its rRNA moves along the mRNA and reads the message during protein synthesis? Ribosome 15. What is molecule B in Figure 12-3, and what is its function? Transfer RNA (tRNA) – carries amino acids to ribososomes 16. What are the three main parts of an RNA nucleotide? Ribose sugar, phosphate group, nitrogen base 17. Unlike DNA, RNA contains nitrogen base called uracil. 4 Figure 12-2 18. According to Figure 12-2, what codons specify the amino acid arginine? CGG, CGA, CGC, CGU 19. How many bases are needed to make each codon? 3 bases 20. How many codons are needed to specify one amino acids? One 21. The order of nitrogenous bases in DNA determines the order of amino acids in proteins. 22. Genes contain instructions for assembling proteins. Chapters 11 & 14 1. The different forms of a gene are called alleles. 2. Organisms that have two identical alleles for a particular trait are said to be homozygous 3. Probability is the likelihood that a particular event will occur. 4. When you flip a coin, what is the probability that it will come up tails? 1/2 5. A Punnett square is a diagram that shows the genotypes of the offspring, the alleles in the gametes of each parent, all possible results of a genetic cross, but does not show the actual results of a genetic cross. 6. A phenotype is the physical characteristic of an organism. 5 Tt T T t TT Tt TT T TT T = tall t = short Tt Figure 11-1 7. In the Punnett square shown in Figure 11-1, the genotypes of the offspring are TT and Tt and phenotypes of all the offspring is tall. 8. Pea plants that are TT, Tt or tt have same/different genotypes. 9. Crossing a pure-bred green-podded (dominant trait) plant with a pure-bred yellow-podded (recessive trait) plant is symbolized by: GG x gg 10. When Gregor Mendel crossed true-breeding tall plants (TT) with true-breeding short plants (tt), the offspring were tall (Tt) because the allele for tallness is dominant 11. In the P generation, a heretozygous tall plant is crossed with a homozygous short plant. The probability that an F1 plant will be tall is 50 % 12. The principle of independent assortment states that genes for different traits can segregate independently during the formation of gametes. 13. The principle of dominance states that some alleles are dominant and others are recessive. 14. How many recessive alleles for a trait must an organism inherit in order to show that trait? 2 15. How many different allele combinations would be found in the gametes produced by a pea plant whose genotype was RrYY? 2 16. If a pea plant that is heterozygous for round, yellow peas (RrYy) is crossed with a pea plant that is homozygous for round peas but heterozygous for yellow peas (RRYy), how many different kinds of phenotypes are their offspring expected to show?2 17. Incomplete dominance is when one allele is not completely dominant over another. 18. Codominance is when both alleles show up in the phenotype 19. Multiple alleles - for e.g. Human genes for blood types 20. Polygenic traits - for e.g. wide range of skin color in humans 6 21. In cross between a black fowl and a white fowl, the offspring produced were blue (incomplete dominance). Show the cross between black and blue fowls. Determine the possible genotypes and phenotypes of the offspring. Key Parent Genotypes = = X = X Gametes Punnett Square Genotype ratios: Phenotype ratios: 22. Colorblindness is a X linked recessive trait. Cross a carrier female with a colorblind male. Key: = Parent Genotypes X X Possible Gametes = = = Punnett Square = Genotype ratios: Phenotype ratios: 23. Give three examples of sex-linked disorders. color blindness hemophilia Duchenne muscular dystrophy 24. A chromosome consists of many genes. 25. What are all the chromosomes except the sex chromosomes called? autosomes. 26. What chromosomes are needed to produce a female? XX male? XY 7 27. The failure of chromosomes to separate during meiosis is called nondisjunction. 28. Three copies of chromsome 21 (Down Syndrome) is known as Trisomy 21. 29. What chromosomes do people with Turner syndrome have? Only 1 X 30. Males with Klinefelter syndrome have an extra X chromosome (karyotype 47,XXY). 31. Sickle cell anemia is a disorder that involves codominant alleles and it results in production of abnormal red blood cells. 32. What does the following picture show? Crossing over 33. The farther apart two genes are located on a chromosome, the more/less likely they are to be inherited together 34. What are Gametes? sex cells; They combine during sexual reproduction; examples are egg, sperm 35. Gametes or sex cells have one complete set of chromosomes (one allele for each gene) that means the gametes have only half the number of chromosomes as compared to the organism’s all other body cells. 36. All the regular body cells (somatic cells) are diploid (have 2 complete sets of chromosomes). The diploid number is indicated by 2N). The gametes are haploid (haploid number is indicated by N or 1N) Mitosis All somatic cells result from mitosis Meiosis Only sex cells result from meiosis 2 daughter cells – exactly identical to each other and parent cell 4 daughter cells – genetically different from each other and parent cell # of chromosomes remains same Diploid Diploid 4 phases # of chromosomes is cut in half Diploidhaploid 8 phases 8 RY Ry RrYy rY ry RY RRYY RRYy RrYY RrYy Ry RRYy RRyy RrYy Rryy RrYy rY RrYY RrYy rrYY rrYy ry RrYy Rryy X Y Seed Shape R – round r – wrinkled Seed Color Y – yellow y – green Figure 11-2 37. What is the phenotype ratio of the offspring in the Punnett square shown in Figure 11-2? 9:3:3:1 38. Identify the phenotype of the offspring represented in the square labeled X in Figure 11-2? wrinkled yellow 39. How many of the offspring will be Round, Yellow? 9 40. What will be genotype of the offspring represented in the square labeled Y in Figure 11-2? rryy Figure 11-5 41. In Figure 11-5, what is the genotype of the pink-flowered snapdragons? RI 42. What do the alleles in Figure 11-5 show? incomplete dominance 43. According to Figure 11-5, if red-flowered snapdragons and ivory-flowered snapdragons are crossed, what percentage of their offspring would be expected to be pink-flowered? 100% 44. According to Figure 11-5, if two pink-flowered snapdragons are crossed, what percentage of their offspring would be expected to be pink-flowered? 50% 9 Chapters 15, 16 and 17 1. Charles Darwin proposed the theory of natural selection. 2. According to Darwin, early giraffes probably had necks of same/different lengths and the ones that were better adapted, survived. 3. Whose theory was “use or lose.” Lamarck. 4. According to Lamarck’s theory aquired traits are passed on to offspring. 5. Structures that are reduced in size and have no apparent function are called as vestigial structure 6. The appendix is an example of a vestigial structure. 7. The wing of a bird and the wing of an insect are examples of analogous structures because they have the same function, but different structure. 8. The flipper of a dolphin and the leg of a dog are examples of homologous structures because they have same basic structure (have different mature forms but develop from same embryonic tissues) but different function. 9. What is evolution? Change in organisms over long periods of time 10. What are fossils? The remains of organisms that lived in the past. 11. The scientists who study fossils and interpret the fossil record are known as Paleontologists. 12. The oldest fossils would normally be found in the lowest rock layers. 13. What are evidences of evolution? a. Fossils b. Biochemical/DNA c. embryology 14. The similarity between embryos (if embryos look similar for longer) indicates that some organisms have a common ancestor. 15. What is the half-life of an element? Time it takes ½ the element to decay 16. Geographic isolation is when populations are separated from each other by a mountain range, new river, etc. 17. Separation of populations by geographic barriers can lead to speciation. 18. Define “Species”. A group of similar individuals who can interbreed and produce fertile offspring. 19. Members of the same species that live in the same area are called as population. 10 20. What is a gene pool? All the alleles of all the genes in a population 21. The Hardy-Weinberg Principle explains how often alleles occur in a population. 22. What is an organism’s fitness? Its ability to survive and reproduce. 23. The peppered or light colored peppered moth is the most “fit” in its environment when the trees were light colored. 24. What is genetic drift? small gene changes due to random events or chance 25. The type of genetic drift where a small group of individuals colonize a new habitat is called the founder effect 26. Earth’s first atmosphere contained little or no oxygen. 27. A mutation can change a gene. 28. What are the conditions needed for genetic equilibrium? 1. no mutations 2. random mating 3. no natural selection 4. large populations 5. no immigration 29. When genetic equilibrium is reached, the allele frequencies remain constant. The evolution occurs when genetic equilibrium is disrupted. 30. When unrelated species begin to look alike because they occupy the same environment, this is convergent evolution. 31. Darwin’s finches were an example of adaptive radiation, which is when many species evolve from a common ancestor and one specific trait is improved in each species in order to adapt to the environment. Chapters 3, 4, 5 and 6 1. What are the levels of organization of an ecosystem species – population – community – ecosystem – biome - biosphere 2. Another word for producer is autotroph. 3. Green plants or algae are examples of autotrophs. 11 4. The organism which can not make their own food are known as heterotrophs. 5. What does a heterotrophic organism need to do in order to get the energy? Consume other organisms 6. A decomposer that obtains nutrients by breaking down dead and decaying matter. 7. A carnivore feeds only on meat; a herbivore feeds only on plants; an omnivore feeds on both. 8. Only 10% of the energy stored in an organism can be passed onto the next trophic level. Of the remaining energy, some is used for the organism’s life processes and the rest is given off as heat. 9. A biomass pyramid shows the amount of living tissue at each trophic level. Which level of the following energy pyramid has the most biomass? 10. Why can matter recycle through the biosphere? because matter is not used; it’s transformed (changed) 11. Of the following, water, nitrogen, carbon and energy, which one is not recycled in the biosphere? Energy because it is used 12. Ecosystems are constantly changing in response to natural and human disturbances. Older inhabitants gradually die out and new organisms move in, causing further changes in the community. This series of predictable changes that occurs in a community over time is called "Ecological Succession". Primary succession – no soil exists when succession begins (on bare lifeless substrate ex rock or open lake). Secondary succession - soil exists and succession begins after disturbance (ex after storm or forest fire, abandoned farm). 12 13. Define the following: o denitrification – conversion of nitrates into nitrogen gas o nitrogen fixation – conversion of nitrogen gas into ammonia o microclimate – the climate within a small area that differs from the climate around it o demography – scientific study of populations o niche - the range of physical and biological conditions in which an organism lives and the way it uses those conditions o immigration – moving into a population o abiotic- the nonliving elements of an ecosystem o biotic – the living elements of an ecosystem o photic zone – the region of the ocean that receives light o aphotic zone – the region of the ocean that does not receive light o deciduous – a tree that loses its leaves in the fall 14. Sulfur and nitrogen compounds in smog combine with water to form acid rain. 15. What happens as DDT moves up the trophic levels in a food chain or web? its levels increase 16. When an environment has reached the maximum number of individuals it can support, it has reached its carrying capacity. 17. The types of Species Interaction (Symbiosis) Predation (+/-) – predator kills and eats prey; there is a consumer and a resource Competition (-/-) – species and organisms compete over the same limited resources Parasitism (+/-) – a parasite is an organism that lives in or on another organism; a host is an organism that provides nutrients to the parasite; most parasites do not kill their hosts Mutualism (+ / +) – cooperative partnership between 2 species; both species can benefit Commensalism - (+ / 0) – one species benefits and the other species is neither helped nor harmed Genetic Engineering 1. What are restriction enzymes? The enzyme that recognizes and cuts DNA at a specific sequence of nucleotides by making incisions, through each sugar-phosphate backbone (i.e. each strand) of the DNA double helix. 13 2. During Gel Electrophoresis, in which direction will the DNA fragments travel? The DNA fragments move toward the positive pole of the gel. 3. Why do the DNA fragments travel in this direction? DNA is negatively charged molecule. 4. Where do the shorter DNA fragments (bands) end up reaching on a completed gel (at the completion of gel electrophoresis)? At the end of the gel – close to the positive pole. 5. DNA that does not exist naturally, but is created artificially by combining a gene taken from one organism and attaching it to the DNA of another organism is called as Recombinant DNA (rDNA). 6. What is a transgenic organism? Organisms that contain DNA from other species. 7. The following gel was produced by gel electrophoresis. Each letter at the top represents four bases in a DNA strand. The mark under each of the bases represents segments of DNA that migrated through the gel (tagged with dye /radioactivity). DNA sequence on the gel is CACAGATG 8. What is Transformation? a cell takes in DNA from outside the cell. This external DNA becomes a component of the cell's DNA 9. What is plasmid? A small, circular piece of DNA separate from single circular bacterial chromosome. Look over… Notes from the previous units (they are also available on my website), plant notes Labs/Activities Punnett square packet and worksheets (mono/dihybrid, incomplete dominance , co-dominance, sexlinked) Codon wheel Karyotype Pedigree Carrying capacity Energy Pyramid 14