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Source of picture: Campbell 8th edition Objectives: • Explain the unique characteristics of Kingdom Monera (prokaryotic characteristics) • Classify Kingdom Monera into Eubacteria and Archaebacteria (based on cell wall structure, association of histone to the DNA and structure of membrane lipids) • Describe the diversity of bacteria (based on cell shapes, gram-stain and position of flagella) • State the importance of bacteria (nitrogen fixation, symbiotic, pathogenic, in research and development) Source of picture: http://micro.magnet.fsu.edu /cells/bacteriacell.html The generalize structure of a bacterium Characteristics of Kingdom Monera (prokaryotic characteristics) Prokaryotes Diameters in the range of 0.5-5 μm Unicellular, but some species can aggregate in colonies Lack true nuclei/ nuclear membrane - DNA not enclosed by nuclear membranelies free in cytoplasm Lack membrane-bound organelles Circular chromosome (single circular naked DNA molecule) located in nucleoid region Many species also have plasmids Have cell wall, made up of peptidoglycan/murein/muramic acid Contain 70S ribosome (eukaryotes =80S) Figure 27.8 Source of picture: Campbell 8th edition Chromosome Plasmids (ring of DNA) 1 m Plasmid: small circular DS DNA molecules carrying accessory genes eg: genes for resistance to antibiotics. Figure 27.3a (a) Gram-positive bacteria: peptidoglycan traps crystal violet. Cell wall Peptidoglycan layer Plasma membrane Source of picture: Campbell 8th edition CLASSIFICATION OF KINGDOM MONERA The prokaryotes can be classified into two distinct groups: a) Eubacteria. (e.g.: E.coli, Cyanobacteria,etc) b) Archaebacteria. (e.g.:Sulfolobus) MONERA EUBACTERIA - True bacteria (eg: E.coli ) - Cyanobacteria environment), (blue green algae) lovers”) ARCHAEBACTERIA (eg: Sulfolobus) - Bacteria that live in extreme environment:(eg:Methanogens ( live in moderate Thermophiles (“heat Halophiles (“salt lovers”) 1. Eubacteria Characteristics of Eubacteria = bacteria Mostly bacteria - gram-positive and gram negative bacteria, cyanobacteria (blue green bacteria) Widely distributed in the environment Unicellular/ live in colonial arrangement Unique cell wall containing peptidoglycan (consist of sugar-polymers linked with short polypeptides) that encloses the entire bacteria Some secrete sticky layer of polysaccharide or protein, forming a capsule outside the cell wall- acts as additional protective layer, increase resistance to host and adherence to a substrate Move by rotate the flagella Characteristics of Eubacteria = bacteria Pili- fine tubule extended out from the cell membrane through the cell wall - Help cells to adhere to surfaces - Attach to another bacteria during conjugation process Reproduce asexually (binary fission, some by budding) Form a unique resting cell (endospore) when the environment becomes unfavourable Genetic materials can be transferred between individuals by parasexually (transformation, Binary Fission Figure 27.9 Source of picture: Campbell 8th edition Endospore Coat 0.3 m Many prokaryotes form metabolically inactive endospores, which can remain viable in harsh conditions for centuries Figure 27.12 Source of picture: Campbell 8th edition 1 m Sex pilus Characteristics of Eubacteria = bacteria • Great metabolic diversity: • Most are heterotrophs (obtain organic compound from other organism). • Majority are free-living saprotrophs / saprobes • Some are parasites. • Some are autotrophs (manufacture their own organic molecules from simple raw material) • photoautrotrophs (obtain energy from light) • chemoautotroph (obtain energy by oxidizing inorganic chemicals) Characteristics of Archaebacteria Can survive in extreme environments (salt pond, hot springs, acidic medium) Source of picture: Campbell 8th edition - Have unique features structurally and biochemically Appear to be more closely related to eukaryotes than to bacteria in term of genes and several metabolic pathways Cell wall is composed of polysaccharides and protein, lack peptidoglycan Eg: extreme halophiles (in highly saline environments), extreme thermophiles (in very hot environments), and Orange and yellow colonies of thermophilic prokaryotes grow in hot water of a Nevada geyser Differences between eubacteria and archaebacteria Characteristics Eubacteria (eg: E. coli) Archaebacteria (eg: Sulfolobus) Cell wall Consist unique layer of peptidoglycan Polysaccharides and protein (do not have peptidoglycan) Structure of membrane lipids The lipids in the plasma membrane are composed of unbranched hydrocarbon chains The lipids in the plasma membrane are composed of branched hydrocarbon chains Association of histone to the DNA DNA is single, circular molecule – no histone protein associated with DNA DNA associated with histones RNA polymerase Several kinds 1 kind 1. coccus / cocci (spherical shape) Cell shapes 2. bacillus / bacilli (rod shape) 3. spirillum / spirilla (spiral shape) 4. Vibrio (comma-shape) DIVERSITY OF BACTERIA Gram-negative Gram stain Gram-positive Position of flagella The different types of bacteria classified based on their shapes: Spherical shape (coccus) Rod shape (bacillus) Spiral shape (spirilium) Comma shape (vibrio) • • • • Single cell: coccus & bacillus Diplo_ (cells existing in pairs) Strepto_ (cells existing in filaments) Staphylo_ (cells existing in clusters) Source of picture: http://en.wikipedia.org/wiki/Bacterial_cell_structure Figure 27.2 1 m 1 m 3 m Source of picture: Campbell 8th edition (a) Spherical (b) Rod-shaped (c) Spiral *Gram’s stain differentiates between 2 major cell-wall types. Procedure: 1) Bacteria is stained by using crystal violet solution and followed by iodine solution. 2) Crystal violet-iodine complex which is purple in colour is formed at the cell wall stains the peptidoglycan of cell wall 3) Then alcohol is used to rinse the staining. Staining again with a red dye. 4) As a result : a) Gram positive – cell wall stain purple or blue GRAM STAIN: • Gram positive bacteria • Stains blue or purple • Simple cell walls with lots of peptidoglycan, no lipopolysaccharides • Purple or blue stain is trapped in cell wall • Less threatening pathogens, • Eg : Bacillus, Clostridium staphylococcus and Streptococcus. • Gram negative bacteria • More complex cell walls with less peptidoglycan but with another outer lipoprotein membrane with lipopolysaccharides • Blue dye wash out so they stain red • More pathogenic than gram positive, eg: typhus, gonorrhea • Lipopolysaccharides in outer membrane often toxic • Eg: Salmonella, Echerichia and Azotobacter Figure 27.3 (a) Gram-positive bacteria: peptidoglycan traps crystal violet. Gram-positive bacteria (b) Gram-negative bacteria: crystal violet is easily rinsed away, revealing red dye. Gram-negative bacteria Carbohydrate portion of lipopolysaccharide Cell wall Peptidoglycan layer Cell wall Plasma membrane 10 m Outer membrane Peptidoglycan layer Plasma membrane Source of picture: Campbell 8th edition Gram-Positive Bacteria Gram-Negative Bacteria The cell wall is made up of a thick layer of peptidoglycan The cell wall consists of an thin inner peptidoglycan layer & a thick outer lipoprotein layer Advantageous cell wall feature: The thick peptidoglycan layer is strong & is not easily broken. Disadvantagesous cell wall feature: The peptidoglycan layer is easily digested by lysozyme The peptidoglycan layer is protected from the action of lysozyme by the outer lipoprotein layer Penicillin antibiotic prevents The presence of the thick outer synthesis of peptidoglycan. So the lipoprotein layer, penicillin is less cell wall is brittle & easily destroyed. effective in destroying the bacteria Eg: Streptococcus, Staphylococcus Eg: Escherichia coli, Salmonella Gram-positive and gram-negative bacteria The positions of the flagella give the bacteria different names as follows: - Atrichous – absence of flagella. - Monotrichous – a single flagellum present at one end. - Amphitrichous – a flagellum occurs at each of the two ends. - Cephalotrichous – a group of flagella found only at one end. - Lophotrichous – a group of flagella occurs at each of the two ends. - Petritrichous – a number of flagella distributed all over the surface. Position of flagella Monotrichous Cephalotrichous Amphitrichous Petritrichous Source of picture: http://evillusion.wordpress.com/dr-millers-paper-onirreducible-complexity-and-my-comments/ TYPES OF CYNOBACTERIA E.g. Nostoc, Anabaena Can recycle nitrogen from atmosphere Importance to increase nitrate and maintain enrichment oil Importance component ‘algae bloom’. CHARACTERISTIC CYNOBACTERIA Cell shape : round Cells look like filament and no branch Habitat : pond water Heterocyst – Heterocysts are enlarged cells with thick cell walls. They lack of chlorophyll and give colourless appearance. They are the site of nitrogen fixation. Akinete – A nonmotile reproduction cell. It is an enlarged resting cell with thick wall and large amount of food reserves an DNA. After cell division has occurred within the akinete the cell wall ruptures, releasing a filament of cells Akinetes ANOTHER CHARACTERISTIC Only have chlorophyll a for photosynthesis Surrounded by mucilage (mucus) Have red / blue pigment Food storage : starch or glycogen No flagellum The importance of bacteria 1. Pathogenic Bacteria (Bacterial parasites that cause diseases called pathogens – tuberculosis, cholera, tetanus, syphilis) 2. Beneficial Bacteria: Bacteria are essential to the nitrogen cycle recycling the chemical elements in ecosystem - Rhizobium: nitrogen-fixing bacteria that convert gaseous nitrogen (N2) to ammonia (NH3) - Bacteria involved in nitrification: i. Nitrosomonas & Nitrococcus: convert ammonia (NH3) to nitrite (NO2-). ii. Nitrobacter: oxidizes nitrite (NO2-) to nitrate (NO3-) Decomposers: Control the breakdown of plants and animals Recycling carbon and phosphorus into the atmosphere Symbiotic relationships: E. coli live symbiotically in the human intestine of human – aid in digestion of food materials that human intestine cannot break Breaking cellulose in herbivores Food production: Eg: cheeses, yogurt (fermentation) and vinegar production Manufacturing processes: Making soap powders Medical research: For making antibiotics, amino acids & enzymes. Sewage treatment - the main cleansing agents in septic tanks Soil enrichment - Bacteria & Leguminous crops used in agriculture Preservation - For food & alcoholic beverages Clean up environmental - Oil spills (bacteria can digest petroleum) - Specific enzymes extracted from bacteria – household detergents