* Your assessment is very important for improving the workof artificial intelligence, which forms the content of this project
Download WEB
Vectors in gene therapy wikipedia , lookup
Paracrine signalling wikipedia , lookup
Multi-state modeling of biomolecules wikipedia , lookup
Lipid signaling wikipedia , lookup
Two-hybrid screening wikipedia , lookup
Protein–protein interaction wikipedia , lookup
Adenosine triphosphate wikipedia , lookup
Polyclonal B cell response wikipedia , lookup
Photosynthetic reaction centre wikipedia , lookup
Oxidative phosphorylation wikipedia , lookup
Metalloprotein wikipedia , lookup
Biosynthesis wikipedia , lookup
Biochemical cascade wikipedia , lookup
Fatty acid metabolism wikipedia , lookup
Gene regulatory network wikipedia , lookup
Signal transduction wikipedia , lookup
Amino acid synthesis wikipedia , lookup
Proteolysis wikipedia , lookup
Phosphorylation wikipedia , lookup
Evolution of metal ions in biological systems wikipedia , lookup
Citric acid cycle wikipedia , lookup
Lecture 13 WEB: Go to pollev.com/ucibio TEXT: Text UCIBIO to 37607 After joining session, text your question Lecture 13 objectives Apply lectin-carb interactions to cell functions Know the steps of Glycolysis Describe the logic of Glycolysis Know the overall energetics of Glycolysis Apply principles of regulation to understand how Glycolysis is regulated Carbohydrates & Lectins Protein recognition Function of lysosome? - Degradative enzymes must get to lysosome! Proteins made? - How to “target”? Specific glycosylation pattern “mails” proteins to lysosome No glycosylation = ? Protein recognition No glycosylation = ? I-Cell disease Protein stuck. Effects? Glycosaminoglycans, etc. form Inclusions in lysosome Degradative enzymes in blood & urine I-cell disease Putting it all together – Glycolysis Understood thermodynamics of biochemical reactions Understood reaction rates Understood how enzymes work Regulating individual reactions & pathways So, here we go… Glycolysis Glc Pyruvate Stage 1: Stage 2: Glycolysis steps: Which reactions do what? Glc in cell isomer conformation both 3-C molecules into 3-C molecules to enable splitting into two 3-C molecules energy (ATP) 1. Fix Glc in cell 2. Get a cleavable molecule Need to get TWO 3C chains 2.5 Fix the isomer form 3. Cleave into 3C molecules 4. How to use BOTH molecules? Equilibrium: 96% DHAP! 5. Start energy generation phase Carbon oxidation Phosphoryl transfer potential 6. Breakeven! Substrate level phosphorylation Carbon oxidation Phosphoryl transfer potential 7. Wait for it… 7.5 Wait for it…. 8. Profit! 1. Fix Glc in cell 2.5 Fix the isomer form 8. Profit! Before understanding regulation… Overall reaction & importance of NADH Glc + 2ADP + 2Pi + 2NAD+ 2Pyruvate + 2ATP + 2NADH+H+ + 2H20 Before understanding regulation… What is the fate of Pyruvate in cells? Understanding regulation… Roles of Glycolysis What are the roles of Glycolysis in cells? Polysaccharides Monosaccharides Glucose Amino Acids Amino Acids Nucleotides Pyruvate ATP Acetyl-CoA TCA Fru-2,6-bis-PO4 Lactic acid Regulating the pathway What are the roles of Glycolysis in cells? Positive regulators (Need MORE Glycolysis) Negative regulators (Need LESS Glycolysis) Key regulatory points of Glycolysis Key regulatory points of Glycolysis Key regulatory points of Glycolysis