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This article appeared in a journal published by Elsevier. The attached copy is furnished to the author for internal non-commercial research and education use, including for instruction at the authors institution and sharing with colleagues. Other uses, including reproduction and distribution, or selling or licensing copies, or posting to personal, institutional or third party websites are prohibited. In most cases authors are permitted to post their version of the article (e.g. in Word or Tex form) to their personal website or institutional repository. Authors requiring further information regarding Elsevier’s archiving and manuscript policies are encouraged to visit: http://www.elsevier.com/authorsrights Author's personal copy Developmental Biology 384 (2013) 331–342 Contents lists available at ScienceDirect Developmental Biology journal homepage: www.elsevier.com/locate/developmentalbiology Evolution of Developmental Control Mechanisms Beta-catenin patterns the cell cycle during maternal-to-zygotic transition in urochordate embryos Rémi Dumollard a,b,*, Céline Hebras a,b, Lydia Besnardeau a,b, Alex McDougall a,b a b UMR 7009, UPMC University, Paris 06, France Centre National de la Recherche (CNRS), Observatoire Océanologique, 06230 Villefranche-sur-Mer, France art ic l e i nf o a b s t r a c t Article history: Received 14 August 2013 Received in revised form 18 September 2013 Accepted 3 October 2013 Available online 16 October 2013 During the transition from maternal to zygotic control of development, cell cycle length varies in different lineages, and this is important for their fates and functions. The maternal to zygotic transition (MZT) in metazoan embryos involves a profound remodeling of the cell cycle: S phase length increases then G2 is introduced. Although β-catenin is the master regulator of endomesoderm patterning at MZT in all metazoans, the influence of maternal β-catenin on the cell cycle at MZT remains poorly understood. By studying urochordate embryogenesis we found that cell cycle remodeling during MZT begins with the formation of 3 mitotic domains at the 16-cell stage arising from differential S phase lengthening, when endomesoderm is specified. Then, at the 64-cell stage, a G2 phase is introduced in the endoderm lineage during its specification. Strikingly, these two phases of cell cycle remodeling are patterned by β-catenindependent transcription. Functional analysis revealed that, at the 16-cell stage, β-catenin speeds up S phase in the endomesoderm. In contrast, two cell cycles later at gastrulation, nuclear β-catenin induces endoderm fate and delays cell division. Such interphase lengthening in invaginating cells is known to be a requisite for gastrulation movements. Therefore, in basal chordates β-catenin has a dual role to specify germ layers and remodel the cell cycle. & 2013 Elsevier Inc. All rights reserved. Keywords: MBT Gastrulation Cell cycle S phase Urochordate Ascidian Introduction During development the speed of the cell cycle changes. Such cell cycle remodeling is important for many aspects of embryonic development including the morphogenetic cell movements of gastrulation, which can be prevented if cell division is not halted (Duncan and Su, 2004; Kurth, 2005; Murakami et al., 2004). Ascidian embryos develop with a fixed number of cells and display a stereotyped pattern of cell division (Hotta et al., 2007). During early embryonic development in non-vertebrate chordates such as the ascidians, the cell cycle is remodeled early, in a predictable manner, and in specific blastomeres, making ascidians an excellent organism to study how cell cycle length is controlled during embryonic development at the single cell level. Different mechanisms are employed to remodel the cell cycle during early embryonic development. Early embryos display successive phases of DNA duplication (S phase) and mitosis (M phase) without the intervening gap phases (G1 and G2) common to somatic cells. S phase is generally the first phase of the cell cycle subject to cell cycle remodeling during embryonic development. In large frog and fly embryos depletion of maternal factors induces n Corresponding author. Fax: þ 33 493 76 3792. E-mail address: [email protected] (R. Dumollard). 0012-1606/$ - see front matter & 2013 Elsevier Inc. All rights reserved. http://dx.doi.org/10.1016/j.ydbio.2013.10.007 cell cycle lengthening. For example, in Xenopus the nucleocytoplasmic (N/C) ratio increases with each round of cell division causing the titration of an as yet unidentified factor leading to a lengthening of S phase at the midblastula transition or MBT (Newport and Kirschner, 1982a; Vastag et al., 2011). In Drosophila embryos it is thought that cell cycle lengthening during cycles 10–13 (prior to the MBT at cycle 14) is provoked by depletion of cyclins A and B which causes an initial slowing of DNA replication that in turn activates chk1/grapes to further slowdown S phase and prophase (Royou et al., 2008; Sibon et al., 1997; Yu et al., 2000). Then at cycle 14, S phase lengthening is caused by loss of the maternal Cdc25 phosphatase Twine (Farrell et al., 2012). Such loss of maternal Cdc25 is due to a dramatic change in Cdc25 stability induced by an increased N/C ratio triggering zygotic transcription (Di Talia et al., 2013; Farrell and O'Farrell, 2013). In Caenorhabditis elegans the cell cycle is also remodeled but much earlier at the two cell stage. This reflects the fact that zygotic transcription starts at the 4-cell stage and gastrulation begins at the 20-cell stage in C. elegans (Baugh et al., 2003). Interestingly, the mechanism employed in C. elegans may be independent of cell volume (Schierenberg and Wood, 1985) and is brought about by a dual mechanism involving Plk1 and the DNA checkpoint system depending on ATL-1/CHK-1. For example, during cell division in C. elegans zygotes when anterior AB and posterior P1 cells are formed, more PLK-1 protein is retained in AB while the activation Author's personal copy 332 R. Dumollard et al. / Developmental Biology 384 (2013) 331–342 of ATL-1/CHK-1 occurs in P1 (reviewed in Budirahardja and Gönczy, 2009). PLK-1 protein is actively retained in AB cells (Budirahardja and Gönczy, 2008; Rivers et al., 2008) causing an increased amount of CDC-25.1 to accumulate in the nucleus thereby driving AB into mitosis ahead of its sister P1 (Rivers et al., 2008), while ATL-1/CHK-1 delays mitotic entry in P1 (Brauchle et al., 2003). A maternal gradient of β-catenin is one of the most ubiquitous factors responsible for germ layer specification from cnidarians to protostomes and non-vertebrate deuterostomes (reviewed in Petersen and Reddien (2009). β-catenin is also the endoderm determinant in embryos of cnidarians, protostomes and some invertebrate deuterostomes (urochordates) and is thereby directly responsible for the onset of gastrulation (Petersen and Reddien, 2009; Woodland and Zorn, 2008). Despite such a conserved role for β-catenin during MZT and gastrulation at moments of major cell cycle remodeling, the possibility that β-catenin controls cell cycle duration before gastrulation has never been explored. Ascidian embryos develop with a small fixed cell number and display cell cycle asynchrony from the 16-cell stage. For example, at the 16-cell stage, 8 vegetal blastomeres divide before the 8 animal blastomeres creating a brief 24-cell stage embryo. Remarkably, this pattern of cell division has been conserved in very distantly-related ascidian species from different orders (e.g. Halocynthia roretzi and Phallusia mammillata). However, it is not known what causes the difference in cell cycle timing between animal and vegetal cells at the 16-cell stage. The earliest known zygotic transcription starts at the 8-cell stage (Halocynthia: Miya and Nishida, 2003; Ciona: Rothbächer et al., 2007), and analysis of transcription factors and signaling molecules in C. intestinalis indicates that gene expression increases gradually during embryogenesis from the 16-cell stage onwards (Imai et al., 2004). Furthermore at this stage β-catenin accumulates in the nuclei of the vegetal cells to specify the endomesoderm (reviewed in Kumano and Nishida, 2007). β-catenin has been shown to promote cell proliferation in somatic cells (Niehrs and Acebron, 2012) but not during endomesoderm patterning in early embryos. Although the majority of zygotic genes are expressed at the MBT in Xenopus, it was recently found that β-catenin patterns the dorsal mesoderm by priming early expression of nodal-related genes at the 32-cell stage, i.e. 5 cell cycles before MBT (Blythe et al., 2010; Skirkanich et al., 2011; Yang et al., 2002). It is interesting to note that, during cell cycle 5 to 10, dorsal cells divide first followed by a wave of cell division over the embryo (Boterenbrood et al., 1983; Satoh, 1977). These dorsal cells are the blastomeres which accumulate nuclear β-catenin, but it is still unknown whether β-catenin modulates cell cycle length in these blastomeres prior to the MBT in Xenopus embryos. Here we have investigated the relationship between β-catenin and cell cycle duration in ascidian embryos and reveal for the first time that β-catenin causes the presumptive endomesoderm cells to divide ahead of the ectodermal cells leading to the appearance of cell cycle asynchrony. We show that β-catenin is both necessary and sufficient for the asynchrony in cell cycle duration at the 16-cell stage. Knockdown of β-catenin protein or blocking β-catenin transactivation by Tcf both cause cell cycle slowing of the vegetal cells indicating that β-catenin is necessary to maintain a rapid cell cycle. Conversely, β-catenin over expression or inhibition of GSK3b both cause the 8 animal blastomeres to shorten interphase and divide at the same time as the vegetal cells, indicating that β-catenin is sufficient to speed up the cell cycle at the 16-cell stage. In contrast β-catenin was found to slow down the cell cycle in endoderm cells just before gastrulation at the 112 cell stage. Therefore β-catenin has a dual impact on cell cycle duration depending on the germ layer and time of development. Materials and methods Biological material Eggs from the ascidians P. mammillata were harvested from animals obtained in Sète and kept in the laboratory in a tank of natural sea water at 16 1C. Egg preparation and microinjection have been described previously (see detailed protocols in Sardet et al., 2011). All imaging experiments were performed at 19 1C. Molecular tools H2B::mRfp and MAP7::GFP were used previously to monitor DNA and mitotic spindles in Phallusia embryos (Dumollard et al., 2011; Prodon et al., 2010; McDougall et al., 2012). Ci-shugoshin (KH.C12.362) was amplified from a Gateway-compatible cDNA library. Ci-β-catenin (KH.C9.53) and DN-Tcf (Hudson et al., 2013) were kindly provided by Yasuo Hitoyoshi (UMR7009). The 27 TCF::H2B-Ch reporter codes for H2B::Cherry driven by a promoter hosting 27 Tcf/Lef binding sites (CCTTTGAT) multimerized upstream of the basal promoter fog. The 27 TCF::H2B-Ch reporter was kindly provided by Dr Eileen Wagner (University California Berkeley, USA). The ability of DN-Tcf to inhibit β-catenin/ Tcf-dependant transcription was assessed in live Phallusia embryos by monitoring 27 TCF::H2B-Ch red fluorescence in embryos expressing DN-Tcf (Fig. 5B). Pm-Pem-1 (Genbank Id: GQ418163) that was cloned and characterized previously (Paix et al., 2011). NT-β-Catenin was generated by targeted mutations of R459 and H460 into ala. These 2 mutations are homologous to the mutations R469A and H470A in human β-catenin which were found to impair binding to Tcf1 (Von Kries et al., 2000). All constructs were made using pSPE3 and the Gateway cloning system (Invitrogen, Roure et al., 2007) unless otherwise stated (see Sardet et al., 2011 for a detailed protocol). Morpholino oligonucleotides injections Sequences of P. mammillata genes were taken from EST collections and Phallusia genome project led by Hitoyoshi Yasuo and Genoscope. Pm-β-catenin (CTGGTTCATCATCATTTCTGCCATG) morpholino oligonucleotides (MO) (GeneTools) was prepared at a concentration of 3 mM in dH2O and stored at 80 1C. MOs were then injected at a pipette concentration of 1 mM ( 0.2% egg volume). Importantly, in order to obtain the phenotypes published in this study for β-catenin MO, MO injection was realized not more than 1 h before fertilization. If MO-injected eggs remained unfertilized for longer time, stronger phenotypes were observed and problems of cleavage were observed as early as the one cell stage. MO was injected alone or co-injected with synthetic mRNAs before fertilization or in one blastomere at the 2-cell stage. Time-lapse and fluorescence microscopy Time-lapse imaging of Venus, GFP, mRfp1 and Cherry constructs was performed on an Olympus IX70 inverted microscope set up for epifluorescence imaging. Sequential brightfield and fluorescence images were captured using a cooled CCD camera (Micromax, Sony Interline chip, Princeton Instruments, Trenton NJ) and data collected was analysed using MetaMorph software (Molecular Devices, Sunnyvale CA). 4D imaging was performed with 6 to 10 z-planes acquired every minutes (or every 2 min) in 3 colours (BF, GFP/Venus and mRfp1/Cherry channel). Time series were reconstructed and analysed by MetaMorph software (Molecular Devices) and Image J (NIH, USA). Timing of the cell cycle was measured by scoring the time from NEB to NEB (visualised either Author's personal copy R. Dumollard et al. / Developmental Biology 384 (2013) 331–342 on the BF image or on the fluorescence image of H2B::mRfp1 or cdc25::Ve, wee1::Ve or β-catenin::Ve which all localise to the nucleus in interphase). Estimation of prophase length was measured by scoring the presence of condensing DNA (with H2B:: mRfp1) or of nuclear specks of Sgo::Ve (Kitajima et al., 2004) within an intact nucleus. Use of pharmacological inhibitors and ablation of the contraction pole The GSK3b inhibitor BIO ((2′Z,3′E)-6-Bromoindirubin-3′-oxime, Tocris Bioscience) was first dissolved in DMSO and used at a final concentration of 2.5 mg/ml. BIO was added at the 4 cell stage and left in the cultured medium during the whole length of development. It has been shown that aphidicolin (10 mg/ml) blocks over 85% of labeled thymidine incorporation during S phase in ascidian embryos (Satoh and Ikegami, 1981). In addition, aphidicolin (2 mg/ml) retarded the cell cycle in the epidermis of neurula stage C. intestinalis embryos (Ogura et al., 2011). Aphidicolin (Sigma) was dissolved in DMSO and then used at a final concentration of 5 mg/ml. This concentration was able to increase interphase length from the 2 cell stage indicating that DNA synthesis was inhibited (Fig. S2A). Ablation of the contraction pole was performed by sucking the vegetal cytoplasm representing 15% of egg volume essentially as described previously (Nishida, 1996). Results Emergence of mitotic domains in the ascidian embryo Ascidians embryos undergo a very stereotyped development comprising little proliferation such that all cells in a fully motile tadpole larvae have divided between 8 and 14 times during 13 h of development (Fujikawa et al., 2011; McDougall et al., 2011). Furthermore, ascidians from different orders (e.g. Phallusia and Halocynthia) display a conserved spatio-temporal pattern of cleavage resulting in the characteristic early gastrula consisting of exactly 112 cells (Lemaire, 2009; McDougall et al., 2011) (see FABA for Ciona intestinalis anatomy or Aniseed virtual embryo). In the transparent embryos of the ascidian P. mammillata, simple bright field (BF) imaging of nuclear envelope breakdown (NEB) and cytokinesis makes it relatively straightforward to measure cell cycle length (from NEB to NEB see Movie S1). In addition to BF imaging, we performed fluorescence imaging of DNA/chromosomes with H2B::mRfp1 and of microtubules with MAP7::GFP (see Prodon et al., 2010 and Sardet et al., 2011 for full protocols) to precisely measure interphase and mitosis length in all blastomeres from fertilization to the 112-cell stage when gastrulation begins (Movie S2; Fig. 1). From the 2-cell stage to the 8-cell stage (cell cycles 2–4), the embryo displays synchronous and rapid divisions with a progressive increase in interphase length (from 8 min at the 2 cell to 14 min at the 8 cell stage). In contrast, the duration of mitosis remains constant lasting 13 to 15 min from 2 to 112-cell stage (Fig. 1D) and beyond (data not shown). As the nucleus is observed during both interphase and prophase we assessed prophase length at higher resolution by visualising chromosome condensation within the intact nucleus (Fig. S1A, n 460 blastomeres). We consistently observed at all stages that chromosome condensation started 3–4 min before NEB (all blastomeres observed except endoderm blastomeres at 112 cell stage that could not be resolved due to gastrulation movements). We further estimated prophase length by visualising recruitment of Shugoshin::Ve to the kinetochores at prophase (Kitajima et al., 2004) and observed that nuclear specks of Ci-Sgo::Ve always formed at around 3–4 min before NEB (Fig. S1B, n 412 333 blastomeres). These observations suggest that prophase length is constant at least until gastrulation and that the increase in cell cycle length observed during early embryogenesis is due to an increase in interphase duration. As was noted in developmental tables for other ascidian species, cell cycle asynchrony was first observed in the 5th cell cycle at the 16 cell stage in Phallusia embryos (Fig. 1A). At this stage, the 6 vegetal most blastomeres specified to become endomesoderm by nuclear β-catenin (A5.1, A5.2, B5.1; Kumano and Nishida, 2007) undergo NEB almost simultaneously thus forming the vegetal mitotic domain (MDVeg in red, average cell cycle length: 31 min). Five minutes later, the B5.2 blastomeres hosting germ plasm (Kumano et al., 2011; Shirae-Kurabayashi et al., 2011) undergo NEB simultaneously (forming the germ lineage mitotic domain: MDGL in yellow, average cc length: 36 min). Around 11 min after MDVeg, the 8 animal blastomeres undergo NEB almost simultaneously (forming the animal mitotic domain: MDAn in green, average cc length: 42 min, Fig. 1A and D, Fig. S3B). Such cell cycle asynchrony is maintained at the 6th cell cycle (32-cell stage) where the 12 blastomeres of MDVeg simultaneously enter mitosis followed by the 4 of MDGL (B5.2 descendants) and finally, the 16 blastomeres of MDAn (Fig. 1B). At the 64 cell stage, a second phase of cell cycle remodelling is observed as MDVeg is subdivided into 2 distinct mitotic domains termed Veg1 and Veg2: (Fig. 1C1– C3). First, 12 peripheral blastomeres (comprising mesoderm and neural lineages) divide to give rise to a 76-cell stage (Fig. 1C2). Then MDAn and A7.6 blastomeres divide followed by the 6 blastomeres of MDGL that separate from the germ lineage to give rise to the 112-cell stage (Fig. 1C3). At this stage all blastomeres are in their 8th cell cycle except for 5 pairs endoderm precursors (A7.1, A7.2, B7.1, B7.2, A7.5) and the pair of germ cell precursors (B7.6) (Fig. 1C3). The 5 pairs of endoderm precursors will then enter mitosis after undergoing apical constriction and basolateral shortening during an interphase of 80 min (Fig. 1D, Sherrard et al., 2010). Differential S phase length creates the onset of cell cycle asynchrony at the 16-cell stage In order to determine whether the 8 animal blastomeres that delay mitotic entry at the 16-cell stage were in S phase or had entered G2, we used aphidicolin to blocks S phase progression. Following aphidicolin treatment during S phase, when sister chromatids separate and move to the poles of the mitotic spindle at anaphase, unreplicated DNA is stretched between the separated sister chromatids forming a DNA bridge linking the sister telophase nuclei (Raff and Glover, 1988, Dalle Nogare et al., 2009). Conversely, aphidicolin treatment of cells post S phase does not cause the formation of DNA bridges. Aphidicolin delays mitotic entry from the 2 cell stage (Fig. S2A) but it does not provoke cell cycle arrest in early Phallusia embryos (not shown). We incubated 16-cell stage ascidian embryos with aphidicolin at different times after NEB of MDVeg (noted t¼0′ in Fig. S2C). Aphidicolin produced DNA bridges in MDAn when applied between 0 and 5 min after NEB in MDVeg but not when applied between 6 and 9 min after NEB in MDVeg (Fig. 2A, Fig. S2B). As expected, aphidicolin had no effect on MDVeg (n ¼6 embryos, Fig. 2A). Together these observations indirectly indicate that animal blastomeres are still in S phase when vegetal blastomeres are in mitosis (Fig. S2C). As animal blastomeres retain a nucleus for a further 6 min, these observations suggest that a potential G2 phase of no more than 3 min might occur in animal cells (Fig. S2C). We performed the same experiment at EGT by perfusing aphidicolin at the late 76-cell stage when MDVeg1 cells have completed their 7th division whereas MDVeg2 are still in interphase of cell cycle 7 and MDAn are entering mitosis ending cell Author's personal copy 334 R. Dumollard et al. / Developmental Biology 384 (2013) 331–342 Fig. 1. Mitotic domains in Phallusia embryos. Fluorescence images of DNA (H2B::mRfp1 in red) and mitotic spindles (MAP7::GFP in green) taken from time-lapse imaging experiments and corresponding schematic representations of Phallusia embryos. Scale bars¼ 20 mm. (A) 16 cell stage: In the vegetal hemisphere, the blastomeres A5.1, A5.2 and B5.1 are already in mitosis (m) and form the first mitotic domain (MDVeg in red) while the germ lineage (B5.2) is still in interphase (i) and will enter mitosis second forming MDGL (in yellow). The 4 animal blastomeres are also in interphase and will enter mitosis last, forming the third mitotic domain (MDAn in green). (B) 32 cell stage: 42 min later the 12 descendants of MDVeg are in mitosis whereas the 4 descendants of MDGL and MDAn are still in interphase of cell cycle 6. (1) 64 cell stage: 94 min after (A), 14 descendant of MDVeg (A7.3, A7.4, A7.6, A7.7, A7.8, B7.3, B7.4) are in mitosis together forming MDVeg1 (in red). MDGL and MDAn are still in interphase. (2) 76 cell stage: 108 min after (A), the 32 animal blastomeres are in mitosis of their 7th cell cycle while the blastomeres of MDGL and MDVeg2 are in their 7th interphase and blastomeres of MDVeg1 are in their 8th interphase. (3) 112 cell stage: 40 min later, the 10 presumptive endoderm blastomeres (A7.1, A7.2, A7.5, B7.1, B7.2) and MDGL blastomeres are still in their 7th interphase whereas MDAn and MDVeg1 are in their 8th interphase. (D) Graph showing cell cycle length of each pair of blastomere from 2 to 64 cell stage. The blue part of the column indicates interphase, purple indicates prophase (as measured in Fig. S1) and yellow indicates mitosis. Cell cycle asynchrony arises at the 16 cell stage (labelled MBT). Red asterisks indicate the germ line precursor pair of blastomeres (B5.2, B6.3, B7.6). At the 64 cell stage (labelled EGT for early gastrula transition). Cell cycle length is increased sharply in the 5 endoderm pairs (E) compared to other vegetal (Veg) and animal (An) blastomeres. Prophase length could not be determined for the 5 endoderm pairs due to motion of the nuclei during their invagination. Author's personal copy R. Dumollard et al. / Developmental Biology 384 (2013) 331–342 335 Fig. 2. Cell cycle asynchrony at the 16 cell stage is due to differential S phase lengthening. 16 cell stage: Left column:bright field (BF) images of a 16 cell stage embryo taken 2 min after addition of Aphidicolin (30 mg/ml) and Hoechst, showing that the 8 animal blastomeres are still in interphase (yellow asterisks indicate nuclei, MDAn: Int5) while the 6 vegetal blastomeres have undergone NEB (MDVeg: Mit). Not shown here is that MDGL is in prophase (MDGL: Pro). Right column: 18 min after Aphidicolin addition, the animal blastomeres are undergoing cytokinesis and DNA bridges (white arrows) can be observed trapped in the cleavage furrows. Each blastomere has been color-coded for clarity. In contrast, 11 min after Aphidicolin treatment the 8 vegetal blastomeres have undergone anaphase and cytokinesis without forming DNA bridges (n¼ 6). Scale bar¼ 20 mm. (B) 76–128 cell stage: Aphidicolin was added at the late 76 cell stage when MDAn entered mitosis of cell cycle 7 ( þ5′ Aphidicolin, top row) and after MDVeg1 blastomeres have completed their 7th mitosis (labelled red, þ 2′ Aphid, lower row). White asterisks indicate that A7.6 pairs are the only blastomeres of MDVeg1 that have not completed cell cycle 7. Labelled in orange are the 10 endoderm precursors which are still in their 7th interphase 2 min after Aphidicolin addition ( þ2′ Aphid). At the 128 cell stage (52 min after Aphidicolin addition) the blastomeres of MDVeg2 have completed cell division without forming DNA bridges (labelled orange, lower row). At the gastrula stage, 76–80 min after Aphidicolin addition, MDAn blastomeres all show DNA bridges (n¼ 4). Scale bar¼ 20 mm. cycle 7 (Fig. 2B). MDVeg2 blastomeres entered mitosis 34 min after perfusion of aphidicolin and completed chromosomes segregation without DNA bridges (n ¼4 embryos, Fig. 2B: Vegetal; 52 and 80 min after aphidicolin perfusion) indicating that MDVeg2 cells were in G2 phase at the time of aphidicolin addition. As a control we observed numerous DNA bridges in MDAn as these blastomeres Author's personal copy 336 R. Dumollard et al. / Developmental Biology 384 (2013) 331–342 were exposed to aphidicolin during the whole of their 8th interphase (Fig. 2B Animal, white arrows). Therefore after about 50 min of interphase (the time of aphidicolin addition), blastomeres of MDVeg2 had completed S phase and were in G2 until they entered mitosis 34 min later. Together these observations show that cell cycle asynchrony and mitotic domains first appear at the 16-cell stage by differential S-phase lengthening. They also suggest that a long G2 phase (doubling interphase length) is introduced in the endoderm lineage to delay mitotic entry in MDVeg2. The cell cycle is patterned by transcription at MBT β-catenin-dependant zygotic The appearance of cell cycle asynchrony at the 16-cell stage coincides with endomesoderm patterning by nuclear β-catenin in MDVeg (Imai et al., 2006; Kumano and Nishida, 2007; Hudson et al., 2013). We sought to assess the role of β-catenin in cell cycle remodelling at the 16-cell stage in ascidians. β-catenin patterning was disabled by injection of β-catenin MO (Fig. 3B, Movie S4), expression of DN-Tcf (Fig. 3C, Movie S3) or by ablating the vegetal cytoplasm (contraction pole: CP) in zygotes (Fig. 3D, Movie S5) to animalize the embryo (Nishida, 1996). These three approaches all caused vegetal blastomeres to divide later while none of these treatments affected cell cycle duration of animal blastomeres (Fig. 3E). These observations show that β-catenin-dependent transcription is necessary for the rapid cell cycle found in MDVeg. Supplementary data associated with this article can be found in the online version at http://dx.doi.org/10.1016/j.ydbio.2013.10.007. Conversely we found that stabilisation of endogenous β-catenin with the GSK3β inhibitor BIO (Tocris Bioscience) speeded-up MDAn (n¼6; Fig. 4B and D, Movie S6). Likewise, expression of β-catenin:: Venus also caused animal blastomeres to divide at the same time as vegetal blastomeres (Fig. 4C and D, Movie S7). Importantly, neither BIO nor over-expression of β-catenin affected vegetal cell cycle speed (Fig. 4D) likely because β-catenin is already stabilized in MDVeg. Supplementary data associated with this article can be found in the online version at http://dx.doi.org/10.1016/j.ydbio.2013.10.007. In order to confirm the hypothesis that zygotic transcription can pattern the cell cycle at the 16 cell stage we measured cell cycle duration in embryos lacking zygotic transcription (Fig. S3A, S3B, S3C, Movie S8). We first inhibited transcription with α-amanitin and actinomycin D but found that both drugs strongly lengthened the cell cycle with enormous variability and induced DNA bridges at the 64–76-cell stage (data not shown) which precludes the use of these inhibitors. We thus decided to use an alternate method to switch off zygotic transcription by expressing Pem1, the maternal factor silencing transcription in the germ lineage of ascidians (Kumano et al., 2011; Shirae-Kurabayashi et al., 2011). Pm-Pem1::Ve expression blocked β-catenin-dependant zygotic transcription in Phallusia embryos (Fig S3C) and inhibited gastrulation (Fig. 5B, Movie S8) indicating that Pem1 expression inhibits zygotic transcription and hence germ layer patterning in Phallusia embryos as it does in other ascidian species (Kumano et al., 2011; Shirae-Kurabayashi et al., 2011). All cell cycle asynchrony was lost in embryos expressing Pm-Pem1::Ve and, when compared with cell cycle timing in WT embryos, MDVeg was found to be significantly slower (Fig. S3A). The spatial pattern of cell division is not affected in Pm-Pem1-expressing embryos (Fig. S3A, Negishi et al., 2007) and blastomere volumes are maintained at the 16-cell stage. Plotting cell volume against absolute cell cycle length clearly shows that there is no correlation between cell cycle length and cell volume at this stage (Fig. S3B; WT embryo is from Fig. 2B). Therefore the cell cycle asynchrony observed at MBT in Phallusia embryos requires zygotic transcription Supplementary data associated with this article can be found in the online version at http://dx.doi.org/10.1016/j.ydbio.2013.10.007. β-Catenin-dependant endoderm specification results in increased interphase length at EGT Nuclear β-catenin was also found to profoundly affect cell cycle length two cell cycles later during the early gastrula transition (EGT, Fig 5A). Expression of WT β-catenin in the whole embryo could increase cell cycle length in MDVeg1 (from 40 to 72 min) whereas a mutant β-catenin which is not able to bind Tcf/Lef (NTβ-catenin, see Materials and methods section) could not (Fig 5A). Reciprocally, down-regulation of β-catenin (DN-Tcf and β-catenin MO) prevented cell cycle lengthening at the 64 cell stage (Fig 5A) and gastrulation (as no endoderm could be formed, Fig. 5B). These observations suggest that Tcf-dependent transcription was responsible for interphase lengthening in the endoderm at EGT. A role for zygotic transcription was confirmed by blocking zygotic transcription using Pm-Pem1::Ve expression (Fig. S3D). As expected, expression of Pm-Pem1::Ve inhibited interphase lengthening in MDVeg1 (Fig. S3D) and also inhibited gastrulation movements (Fig. 5B) demonstrating that zygotic transcription is necessary for cell cycle remodeling during endoderm specification Together our study reveals a dual role for β-catenin-dependant transcription on cell cycle duration: β-catenin speeds up the cell cycle (in the endomesoderm at MBT) then later slows down the cell cycle (in the endoderm at EGT). These data suggest that two different gene regulatory networks that affect cell cycle duration are controlled by β-catenin dependent transcription at MBT and EGT. Discussion Studies in Xenopus and Zebrafish embryos have shown that cell cycle remodeling at MBT does not require zygotic transcription. However, in Drosophila embryos zygotic transcription is necessary for cell cycle remodeling at MBT but this is independent of germ layer patterning. Our study shows that cell cycle remodeling during urochordates embryogenesis relies heavily on β-catenindependent transcription. The first phase of cell cycle remodeling at the 16-cell stage marks the onset of cell cycle asynchrony achieved by differential S phase lengthening. A long G2 phase (of 40 min) introduced in the endoderm precursors at EGT is also driven by β-catenin-dependent transcription. Therefore β-catenin patterning can both speed up and slow down the cell cycle in urochordate embryos. ΜΒΤ in urochordate embryos Cell cycle remodeling during MBT has been studied mostly in animals that have large embryos such as Xenopus, zebrafish and Drosophila. These studies established that the mid-blastula transition (MBT) marks the start of the maternal to zygotic transition (MZT) and occurs 2 to 3 cell cycles before the onset of gastrulation (Edgar and Datar, 1996; Kane and Kimmel, 1993; Newport and Kirschner, 1982). The MBT in vertebrate embryos is defined by molecular events such as zygotic genome activation and loss of maternal mRNAs as well as by cell behavioural changes such as development of cell motility and the onset of asynchronous cell cycles (Edgar and Datar, 1996; Kane and Kimmel, 1993; Newport and Kirschner, 1982). Seminal studies in Xenopus and Drosophila embryos suggest that the N/C ratio controls MBT independently of zygotic transcription until it was discovered recently in Drosophila that the N/C ratio controls the expression of zygotic genes inducing MBT (Lu et al., 2009; Lasko, 2013). Author's personal copy R. Dumollard et al. / Developmental Biology 384 (2013) 331–342 337 Fig. 3. Nuclear β-Catenin is necessary to speed up cell cycle at MBT. (A) WT embryo showing the 3 mitotic domains. Scale bar ¼20 mm. (B) embryo injected at the 2 cell stage with β-catenin MO (indicated in blue). Blastomeres of MDVeg are still in interphase in the injected side whereas they have entered mitosis in the WT side. Blastomeres in the injected side are thus all synchronous. Yellow asterisks indicate nuclei. Scale bar¼ 20 mm. (C) embryo expressing DN-Tcf and H2B::mRfp1 (in red). Images show that while blastomeres of MDVeg and MDGL are in mitosis, MDAn blastomeres are still in interphase. (D) contraction pole ablated embryo expressing MAP7::GFP and PH::GFP showing that all blastomere are in mitosis simultaneously. (E) quantification of cell cycle length in manipulated embryos: graph showing the relative increase in cell cycle time in MDVeg in β-Catenin MO injected embryos (striped bars, n¼7), in DN-Tcf expressing embryos (white bars, n¼ 7) and in contraction pole ablated embryos (diamond bars, n ¼5) compared to WT embryos (black bars, n¼ 5). All treatments induced a significant delay in MDVeg (black asterisks, po 0.01) and all treatments erased all cell cycle asynchrony except DN-Tcf (2 mitotic domains observed: denoted a″ and b″). The first major burst of zygotic gene expression in ascidian embryos is seen at the 16-cell stage, 2 cell cycles before gastrulation (Imai et al., 2004) when the first cell cycle asynchrony is observed. The 16-cell stage in ascidian embryos may therefore be equivalent to the MBT described in other metazoans as it possesses two known properties of MBT. However, ascidian embryos display differences with larger embryos such as Xenopus, zebrafish and Drosophila since transcription of many genes occurs gradually in the ascidian from the 16-cell stage and throughout embryogenesis (Imai et al., 2004) and there has been no report of a mass phase of maternal mRNA destruction. Thus, the MBT in ascidians could be defined as the period where zygotic genome begins to be activated, cell cycle asynchrony first occurs and cell motility begins (we observed previously motility in isolated blastomeres at the 16-cell Author's personal copy 338 R. Dumollard et al. / Developmental Biology 384 (2013) 331–342 Fig. 4. Nuclear β-Catenin is sufficient to speed up cell cycle at MBT. (A) WT embryo showing the 3 mitotic domains. Scale bar ¼20 mm. (B) embryo treated with BIO (2.5 mg/ ml) showing that MDVeg and MDAn are in mitosis whereas MDGL is still in interphase. Scale bar ¼ 20 mm. (C) embryo injected at the late 2 cell stage with mRNA coding for Ciβ-catenin::Ve (which is high in a quarter of the embryo, labelled in blue). β-catenin does not affect MDVeg, slightly delays MDGL and significantly speeds up MDAn which is already in mitosis whereas WT side is still in interphase. (D) quantification of cell cycle length in manipulated embryos: graph showing the relative decrease in cell cycle time in MDAn in embryos treated with BIO (striped bars, n ¼6)), in embryos expressing Ci-β-catenin::Ve (white bars, n¼ 5) and in embryos expressing Ci-NT-β-catenin::Ve (diamond bars, n¼ 5) compared to WT embryos (black bars, n ¼5). All treatments induced a significantly faster cell cycle in MDAn (black asterisks, po 0.01) without affecting MDVeg or MDGL. All treatments erased all cell cycle asynchrony. stage Prodon et al., 2010) although no major phase of maternal mRNA destruction has been yet described. The MBT in different metazoan embryos and its relationship to germ layer specification The MBT occurs before germ layer specification in Drosophila embryos (Lasko, 2013). The number of pre-MBT cell cycles in Drosophila was initially thought to be caused by increasing N/C ratio which triggered Chk1-dependent S phase checkpoint and involved an unknown contribution from zygotic transcription (Edgar and Datar, 1996; Sibon et al., 1997). More recent data from Drosophila instead indicates that zygotic transcription of Vielfaltig occurs first (Sung et al., 2013), and this probably induces tribbles expression resulting in the destabilization of maternal Cdc25 protein (Twine) (Farrell and O'Farrell, 2013). In large vertebrate embryos the MBT occurs independently from germ layer specification. In Xenopus and zebrafish embryos, cell cycle asynchrony at MBT is thought to involve S phase lengthening and G2 introduction caused by depletion of maternal DNA replication factors which, in blastomeres with different volumes, creates the largest N/C ratio in the smallest blastomeres. Thus, the smaller blastomeres possessing the higher N/C ratio have a slower DNA synthesis rate because cytoplasmic replication factors are more limiting in these small blastomeres (Kane and Kimmel, 1993; Newport and Kirschner, 1982). Author's personal copy R. Dumollard et al. / Developmental Biology 384 (2013) 331–342 339 Fig. 5. β-catenin-dependant endoderm specification induces cell cycle asynchrony at EGT. (A) Graph showing cell cycle timing at the 64–112 cell stage (cell cycle 7) in WT embryos (black bars, n ¼3), β-catenin MO injected embryos (red bars, n ¼3–6), DN-Tcf expressing embryos (yellow bars, n ¼3–5), Ci-β-catenin::Ve expressing embryos (light green bars, n¼ 4) and in Ci-NT-β-catenin::Ve expressing embryos (dark green bars, n¼ 4–7). The schematic representations depict the presence of mitotic domains and the average cell cycle length in MDVeg1 and MDVeg2 for each treatment. (B) Images showing gastrulation defects in the manipulated embryos. Gastrulation was inhibited by β-catenin MO (n¼ 6), DN-Tcf (n¼ 7) and Ci-β catenin::Ve (n ¼7) and Pm-Pem1::Ve (n¼ 6 embryos) whereas it was not altered by NT-Ci-β-catenin (n¼ 6). Bottom left inset shows inhibition of TCf-dependant transcription by DN-Tcf in Phallusia embryos (n ¼12 embryos showing 27 TCF::H2B fluorescence except in the part of the embryo expressing Pm-Pem1::Ve). Author's personal copy 340 R. Dumollard et al. / Developmental Biology 384 (2013) 331–342 Fig. 6. Model for cell cycle asynchrony at MBT and EGT in urochordates. (A) Schematic representation of an ascidian embryo at MBT depicting the 3 mitotic domains. β-catenin patterning in the vegetal cells (in red) results in a more processive S phase. In the germ lineage transcriptional outputs of β-catenin are repressed by the germ line transcriptional repressor Pem1 (in pink). B) Schematic representation of an ascidian embryo at EGT depicting the 2 vegetal mitotic domains. β-catenin/Tcf dependant transcription is introducing a G2 phase in the endoderm (Veg2) either via lhx3b or via an alternate route. The onset of cell cycle asynchrony at MBT in ascidian embryos relies critically on patterned zygotic transcription (Fig. 6A). Indeed, we consistently observed that manipulations of the β-catenin pathway led instantly to changes in interphase length. Such quick response of the cell cycle to nuclear β-catenin suggests that β-catenin could pattern the cell cycle directly and in parallel with fate specification. Mitogenic Wnt signals are known to increase c-myc levels (Dang et al., 2006). Among known c-myc targets, those that affect S or G2 phase (eg. cycA, cycB, cdc25 and PCNA) rather than those that promote cell cycle resumption from a quiescent state (eg. cycD, cdk4) would be interesting to investigate further. Alternatively, β-catenin might impact S phase length downstream of fate specification. At the 16-cell stage, nuclear β-catenin induces the expression of FGF9, FoxD and FoxA (Kumano and Nishida, 2007; Imai et al., 2006). Our aim is to address this question by specifically inhibiting these pathways to determine whether β-catenin patterns the cell cycle in parallel or via cell fate specification. Author's personal copy R. Dumollard et al. / Developmental Biology 384 (2013) 331–342 Although it is generally accepted that zygotic genome activation does not affect the speed of the cell cycle in large frog embryos, it has become apparent that many zygotic genes are in fact activated before the MBT (Blythe et al., 2010; Skirkanich et al., 2011; Yang et al., 2002). Interestingly, it has been known for many years that cleavage waves occur in Xenopus before the blastula stage (Boterenbrood et al., 1983; Satoh, 1977). At cell cycle 5, such mitotic waves initiate in the dorsal mesoderm in blastomeres that have the highest nuclear β-catenin levels (Larabell et al., 1997). Moreover, β-catenin induced transcription starts as early as the 32-cell stage in Xenopus (i.e. cell cycle 5: (Blythe et al., 2010), exactly when mitotic waves are observed (Boterenbrood et al., 1983; Satoh, 1977)). It is therefore a possibility that the establishment of the pre-MBT mitotic waves in frog embryos is induced by β-catenin. We therefore suggest that it would be worthwhile to reinvestigate whether cell cycle speed in Xenopus embryos is influenced before the MBT by β-catenin-dependent transcription. In conclusion our observations show that the GRN activated by nuclear β-catenin at the 16-cell stage results in shortening of interphase in the endomesoderm (MDVeg, Fig 6A) whereas, two cell cycles later, the GRN activated by nuclear β-catenin increases interphase length in the 10 endoderm precursors (MDVeg2, Fig. 6B) allowing gastrulation to begin (Sherrard et al., 2010). Such a dual impact of nuclear β-catenin on cell cycle length suggests that cell cycle duration is set downstream of fate by fate determinants (FoxD or FoxA or FGF in endomesoderm at MBT and lhx3b in endoderm at EGT). However the quick response of the cell cycle to changes in β-catenin activity at MBT also suggests that parallel pathways may exist. We would predict that the GRN activated by β-catenin at MBT results in the stabilization of nuclear cdc25 in endomesoderm precursors thereby increasing the speed of S phase. In contrast, a different GRN activated by β-catenin at EGT in endoderm precursors might result in either loss of cdc25 protein and/or induction of wee1 expression to introduce a G2 phase (Murakami et al., 2004). We are currently investigating these different possibilities. Acknowledgments We would like to thank the ANR (08-BLAN-0136-02) and ARC (SFI20111203776) for financial support. We would also like to thank Hitoshi Yasuo for helpful discussions and for providing WT β-catenin and DN-Tcf constructs. The authors also express their warm thanks to Eileen Wagner (UC Berkeley) for the gift of the 27 TCF::H2B-Cherry reporter. Finally, we thank the members of UMR7009 for their help and support and especially Christian Rouvière for managing all imaging systems and Mohammed Khamla for making movie files. Appendix A. 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