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PHM142 <> UNIT 7 <> Lecture outline 2016 Mitochondrial function – TCA cycle and OXPHOS 1) Citric acid cycle as an energy source 2) The respiratory chain as an energy source and oxidative phosphorylation 3) Discussion of: - In a First, Aspirin Is Recommended to Fight a Form of Cancer by Roni Caryn Rabin - Platelet Mimicry, by Omid C. Farokhzad - Nanoparticle Biointerfacing by Platelet Membrane Cloaking by C-M. J. Hu et al., 2015 1 Compartmentalization of the major pathways of metabolism Inner membrane: Oxidative phosphorylation 2 The link btw. glycolysis and the TCA 3 The CAC (TCA) is the 1st stage in cellular respiration – removal of high E electrons from carbon fuels (left). These electrons reduce O2 to generate the proton gradient (red pathway) which is used to syn. ATP. <> The reduction of O2 and the syn. of ATP constitute Ox Phos. 4 5 6 THE CITRIC ACID CYCLE IS A SOURCE OF BIOSYNTHETIC PRECURSORS 7 THE MITOCHONRIAL RESPIRATORY CHAIN AS AN ENERGY SOURCE 8 Origin of mitochondria: the endosymbiont hypothesis The endosymbiont hypothesis suggests that mitochondria have evolved from anaerobic bacteria which were phagocytosed by eukaryote cells at the time oxygen appeared on earth, Similarities between mitochondria and bacteria include the presence of: • cardiolipin •transporters • ribosomes • circular RNA and DNA Therefore mitochondria protein synthesis can be inhibited by: • TETRACYCLINE • CHLORAMPHENICOL. E.g. The extensive use of these drugs can inhibit 1. Bone marrow mitochondrial protein synthesis leading to a decline in the production of white or red cells. 2. Intestinal epithelial cells causing them to cease dividing. 9 The mitochondrial respiratory chain NADH Diagram of a mitochondrion FMNH2 complex I NADH-Q reductase Q 2Fe-2S 4Fe-4S FADH2 in flavoproteins succinate:Q reductase (complex II) complex III Cytochrome reductase Chemiosmotic theory of oxidative phosphorylation cyt c complex IV Cytochrome oxidase O2 Sequence of electron carriers in the respiratory chain 10 Oxidative phosphorylation 11 12 NADH coenzyme Q reductase: complex I FMN NADH NAD+ Q Reduced Fe-S FMNH2 Oxidised Fe-S QH2 NADH-Q reductase O H3 CO C H3 CO C C C O C CH3 CH3 C (CH2C H C O Coenzyme Q10 (UBIQUINONE e- + H+ CH2 )10 H H3 CO C H3 CO C C C OH e- + H+ C CH3 H3 CO C C R H3 CO C OH Semiquinone Intermediate (Q ) C C C CH3 C R OH Reduced Coenzyme Q10 ( UBIQUINOL) The reduction of ubiquinone to ubiquinol proceeds through a semiquinone anion intermediate. 13 Cytochrome oxidase (Complex IV) Lodish Fig. 17-30 14 Cytochrome C – soluble, NOT membrane bound protein 1. 26/104 amino acids residues have been invariant for 1.5 x 109 years. 2. Met 80 and His 18 - coordinate Fe. 3. 11 residues from number 70 - 80 lining a hydrophobic crevice have remained virtually unchanged throughout all cytochrome c regardless of species or even kingdom. 4. A number of invariant arginine and lysine clusters can be found on the surface of the molecule. Cytochrome c has a dual function in the cell. Electron transport for ATP production AND the major cause of most programmed cell death (apoptosis) is initiated by the release of cytochrome c into the cytosol! 15 Cytochrome C - catalytic site R C CH2 H Vinyl group of the heme + HS C R' H2 Cysteine residue of the protein CH3 R C S C R' H H2 Thioether linkage The cytochromes are iron-containing electron transfer proteins of the mitochondrial inner membrane. The iron atom of the heme group in cytochrome c is bonded to a sulfur atom in the cysteine side chain and a histidine nitrogen atom. The heme in cytochromes c and c1 is covalently attached to 2 cysteine side chains by thioether linkages. 16 Electron transport can be blocked by specific inhibitor poisons NADH NADH-Q Reductase QH2 Blocked by rotenone and amytal Cytochrome b Blocked by antimycin Cytochrome c1 Sites of action of some inhibitors of electron transport Cytochrome c Cytochrome Oxidase Blocked by CN- , N3 -, and CO O2 17 Discussion of: In a First, Aspirin Is Recommended to Fight a Form of Cancer by R. C. Rabin Discussion of strategies and details of: Nanoparticle Biointerfacing by Platelet Membrane Cloaking By C-M. J. Hu et al., 2015 18 19 20 21 22 23