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What is your DNA Alias? We use four letters to code all the information contained in DNA: A, T, C, and G. These letters represent the four nitrogenous bases that make up our DNA: Adenine, Thymine, Cytosine, and Guanine, respectively. The letters are read in groups of three by various enzymes and organelles in your cells. A group of three is called a codon. DNA contains the information that is needed by your body to make proteins. The different proteins have specific functions, such as making our hearts, hair, eyes, and ears. The building blocks of proteins are called amino acids. There are 20 amino acids. The order of DNA letters, determines the order of the amino acids, and therefore the type of protein that is made. Each amino acid is represented by at least one codon. In this assignment, you will use the code provided by scientists to identify a specific amino acid using codons to make your “DNA alias” and a “protein” that represents your name. Step1: Write each letter of your full name on the lines on your paper. Step 2: Use the DNA Alias chart (pink paper) to convert your name to your DNA Alias. Replace each letter of your name with its 3-letter codon provided by table. For example: K E N Y O N = DNA Alias = TTC CTC CTG ATG CTA CTG DNA is read by an enzyme inside the nucleus, but the machine that makes the protein is outside of the nucleus. The message needs to get outside the nucleus to the ribosome so that the protein can be made. The enzyme, RNA Polymerase, reads the DNA message and makes a similar molecule to DNA called mRNA or messenger RNA. mRNA is single standed, unlike the double stranded DNA, so it is able to get through the tiny pores in the nucleus to carry the message to the ribosome. This process is called transcription. Another difference between DNA and RNA is that RNA does not have the base Thymine (T), instead it has a base called Uracil (U). Think of RNA as a close cousin to DNA; it carries the same info, just in a slightly different form.When the mRNA is made from the DNA, it is read letter by letter and paired up with a complementary letter. Here are the base-pairing rules: Step 3: Converting your DNA Alias into mRNA. Using your DNA sequence (Step 2), determine the complementary bases to your DNA Alias to make your mRNA on your paper. Ex: K E N Y O N = DNA Alias = TTC CTC CTG ATG CTA CTG mRNA Alias = AAG GAG GAC UAC GAU GAC Once the DNA has been converted into mRNA, the mRNA leaves the nucleus and meets up with the ribosome in the cytoplasm. The ribosome reads one codon at a time and converts the message into a protein using amino acids. This is called translation. Think of the ribosome as a translator. Translating an mRNA message into a physical amino acid chain, will make your protein product Step 4: Visualizing your mRNA – On your paper, color in the sequence of your mRNA. mRNA letter color A U C G White Red Purple Yellow Ex: mRNA = AAG GAG GAC UAC GAU GAC so the first five circles would be: White – White – Yellow – Yellow - White Step 5: Translating your RNA Alias into a Protein You will now act as the ribosome and build your protein product. Using the amino acid chart (pink paper), locate each codon and write down the appropriate amino acid. Ex: mRNA = AAG GAG GAC UAC GAU GAC Amino Acid Sequence = Lysine (Lys) Glutamate (Glu) Aspartate (Asp) Tyrosine (Tyr) Aspartate (Asp) Aspartate (Asp) Step 6: Visualizing your Protein. Use the chart below and draw out your protein. Amino Acid Color & Shape Amino Acid Color & Shape Phenylalanine Leucine Isoleucine Methionine Valine Serine Proline Threonine Alanine Tyrosine Red Square Blue Square White Square Yellow Square Green Square Red Circle Blue Circle White Circle Yellow Circle Green Circle Histine Glutamine Asparagine Lysine Aspartate Glutamate Cysteine Tryptophan Arginine Glycine Red Triangle Blue Triangle White Triangle Yellow Triangle Green Triangle Red Diamond Blue Diamond White Diamond Yellow Diamond Green Diamond What is your DNA Alias? Step1: Write each letter of your full name on the lines below. ____ ____ ____ ____ ____ ____ ____ ____ ____ ____ ____ ____ ____ ____ ____ ____ ____ ____ Step 2: Use the table (pink paper) provided to convert your name to your DNA Alias. Replace each letter of your name with its 3-letter codon provided by table. ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, Step 3: Converting your DNA Alias into mRNA. Using your DNA sequence (Step 2), determine the complementary bases to your DNA Alias to make your mRNA. ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, ______, Step 4: Visualizing your mRNA Alias Step 5: Determining the order of Amino Acids that make up your DNA Alias Your amino acid sequence: ________________, ________________, ________________, ________________, ________________, ________________, ________________, ________________, ________________, ________________, ________________, ________________, ________________, ________________, ________________, ________________, ________________, ________________, ________________, Step 6: Visualizing your Protein. Analysis Questions: 1. Does anyone else in class have exactly the same product as you? Why do you think this is? 2. How was the final product determined? 3. Explain the process that converts DNA into mRNA? Where does it take place in the cell? 4. Explain the process that converts mRNA into an amino acid sequence? Where does it take place in the cell? 5. What are the building blocks of proteins and how are they put together? 6. What would happen to your sequence of amino acids if you read one letter in your name wrong between step 1 and step 2? 7. Since amino acids build proteins, if there was a change in the sequence of amino acids how might that affect the structure and function of the protein? 8. What might happen to your “protein product” if I were to insert or remove an mRNA base? Would it change any of your amino acids? Why or why not? DNA Alias Chart Our Alphabet A B C D E F G H I J K L M N O P Q R S T U V W X Y Z Simplified DNA Sequence CGA CGT ACG CTA CTC AAA CCC GTA TAT TAG TTC GAG TAC CTG CTA GGG CTC GCA AGT TGA TGC CAG ACC CAT ATG ATA The Genetic Code Phe = Phenylalanine Leu = Leucine Ile = Isoleucine Met = Methionine (START) Val = Valine Ser = Serine Pro = Proline Thr = Threonine Ala = Alanine Tyr = Tyrosine His = Histine Gln = Glutamine Asn = Asparagine Lys = Lysine Asp = Aspartate Glu = Glutamate Cys = Cysteine Trp = Tryptophan Arg = Arginine Gly = Glycine