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CENTRO ESCOLAR UNIVERSITY Department of Biological Sciences Manila*Malolos*Makati SYLLABUS PCBS 130 Subject Code Pre-requisites: I. Bio Sci 103 Subject Title Fundamental of Genetics Descriptive Title 5 Credit Unit(s) 3 hrs lec; 6 hrs. lab Hour(s)/Week Botany 11; Zoology 11; Basic Statistics Course Description The course deals with the study of heredity and variations among organisms, historical aspects of Mendelism, cytological and molecular basis of inheritance, molecular genetic mutation and genes behavior in population. It also includes the synthesis of genetic principles and their practical application. This course comes with a laboratory course to be familiar with techniques used in genetics study and some applications. II. Course Outcomes At the end of the course, the students should be able to: 1. illustrate the chromosomal behavior during mitosis and meiosis in somatic and germ cell 2. identify and describe the processes of inheritance and the various factors that drive biological diversification, 3. explain the influence of heredity on future generation by setting down the key facts about human origin in a direct and simple manner, 4. connect the structure of DNA to its functions and describe the molecular process of gene expression from DNA to protein. 5. appraise the importance of the subject in medical field, in animal and plant breeding and in other biological disciplines; and 6. demonstrate behavior that is consistent with the core values of the university. Page 1 of 10 III COURSE PLAN Learning Outcomes At the end of the unit, the students should be able to: 1. Construct a timeline to trace the development of genetics and at the same time recognize the contribution of significant persons in its gradual progression as a science, 2. Prepare a report on the impact of biotechnology and the new and expanding fields of genetics, 3. Analyze the importance of the use of model organisms in genetic studies, and 4. Assess the profound effects of genetic technology on society and as a matter of public policy. At the end of the unit, the students should be able to: 1. Compare the basic structure, parts and functions of the cell and how these concepts relate to genetic function, 2. Relate the structure of chromosomes to its function, 3. Explain the various stages of mitosis and cite its importance in heredity. Course Content Unit I. Introduction to Genetics 1. Genetics Has a Rich and Interesting History 2. From Mendel to DNA 3. Discovery of the Double Helix and the Era of Molecular Genetics 4. Development of Recombinant DNA Technology 5. Impact of Biotechnology 6. New Expanding Fields 7. Genetic Studies Rely on the Use of Model Organisms 8. Living in the Age of Genetics Teaching Strategies Time Allotment Timeline graphic organizer, Library work, Lecture discussion, Power Point presentations, Laboratory activities, Film Viewing, Current Issues 2 weeks Quiz, recitation, Written report Reflection Journal (graded with rubrics) Participation in various activities (graded with rubrics), critical analysis of current issues directly or indirectly involving genetic issues (absence and/or lack thereof) on government policies affecting public interest/ opinion (graded with rubrics) Lecture discussion Use of multimedia materials, collaborative learning, games, laboratory activities model preparation 2 weeks Quiz, graded recitation, written report model presentation practical exam (graded with rubrics) Laboratory Exercises 1. Types of Variations 2. Sexual and Morphological Variation in Drosophila Unit II. Mitosis and Meiosis 1. Cell Structure Determines Genetic Function 2. Chromosomes Exist as Homologous Pairs in Diploid Cells 3. Mitosis Equally Distributes Chromosomes 4. Meiosis Creates Haploid Gametes and Enhances Genetic Variation Evaluative Measures Page 2 of 10 Learning Outcomes 4. Describe meiosis and relate its significance in sexually reproducing organisms as well as its role in diversity, and 5. Distinguish the form and nature of chromosomes between dividing and non-dividing cells. Course Content 5. Development of Gametes 6. Importance of Meiosis to Sexual Reproduction Cycle 7. Cytological Nature of Mitotic And Meiotic Chromosomes At the end of the unit, the students should be able to: 1. Prepare a reflection journal on the life and times of Gregor Mendel and his approach on genetic studies. 2. Interpret results of monohybrid, dihybrid crosses, and of multiple traits. 3. Explain and laws of segregation and independent assortment, and demonstrate their application using genetic problems. 4. Evaluate genetic results whether they fit the established Mendelian ratios using chi-square analysis. 5. Analyze inheritance patterns using pedigrees. 6. Identify specific family genetic trait and construct and examine their own family pedigree. Unit III. Mendelian Genetics 1. Mendel’s Experimental Approach to Study Inheritance Patterns. 2. Monohybrid Cross 3. Dihybrid Cross 4. Inheritance of Multiple Traits 5. Rediscovery of Mendel’s Work in the Twentieth Century 6. Independent Assortment 7. Laws of Probability Explain Genetic Events 8. Evaluation of Genetic Data Using Chi-Square 9. Pedigree Analysis Teaching Strategies Time Allotment Evaluative Measures Laboratory Exercise 1. Mitosis 2. Meiosis 3. Reproductive Cycles Lecture discussions 2 weeks Power Point presentations, Collaborative learning, Games, Laboratory activities, Model preparation Quiz, graded recitation, model presentation, (graded with rubrics ) Participation in various activities Practical exam Board work / Problem Solving about Monohybrid, Dihybrid and Polyhybrid crosses Seat work on pedigree analysis Page 3 of 10 Learning Outcomes Course Content Laboratory Exercises 1. Ultrastructures of the Cell 2. Techniques Used in Demonstrating Chromosomes 3. Chance, Probabilities & Genetic Ratios 4. Statistical Concepts and Tools At the end of the unit, the students should be able to: 1. Distinguish between Mendelian and Non-Mendelian inheritance patterns. 2. Discuss the various types of non-Mendelian inheritance patterns and explain examples for each. 3. Compare and contrast sex-limited and sex-influenced inheritance. 4. Relate the influence of environment on gene behavior. 5. Enumerate and explain types of extranuclear inheritance. Unit IV. Modification of Mendelian Ratios 1. Incomplete or Partial Dominance 2. Codominance 3. Multiple Alleles 4. Lethal Alleles 5. Phenotypes are often affected by more than one gene: gene interactions 5.1. Epistasis 5.2. Novel Phenotypes 6. Pleiotropy 7. X-Linkage 7.1. X-Linkage in Drosophila 7.2. X-Linkage in Humans 8. Sex-Limited and Sex-Influenced Inheritance 9. Genes and the Environment 9.1. Penetrance and Expressivity 9.2. Poison Effects 9.3. Temperature Effects 9.4. Onset of Genetic Expression 9.5. Genetic Anticipation Teaching Strategies Case study, lecture discussion, multimedia presentation, construction / preparation of pedigree per family, laboratory activities Time Allotment 3 weeks Evaluative Measures Quiz, graded recitation model presentation practical exam (graded with rubrics) Problem Solving using Non-Mendelian ratios Page 4 of 10 Learning Outcomes Course Content 10. Genomic Imprinting and Gene Silencing 11. Extranuclear Inheritance 11.1. Chloroplast 11.2. Mitochondria 11.3. Maternal Effect Teaching Strategies Time Allotment Evaluative Measures Laboratory Exercises 1. Gene Segregation in Drosophila 2. Modeling Monohybrid and Dihybrid Crosses 3. Family Pedigree 4. Multiple Alleles: The ABO Blood Groups in Human At the end of the unit, the students should be able to: 1. Define and describe types of sexual dimorphism. 2. Compare the two types of sex chromosomes. 3. Characterize persons with sex chromosome aberrations which includes Klinefelter, Turner, XXX, and XYY syndromes. 4. Illustrate the regions of the human Y chromosome showing specific genes causing maleness in humans. Unit V. Sex Determination and Sex Chromosomes 1. Life Cycles Depend on Sexual Differentiation 2. X and Y Chromosomes Were First Linked to Sex Determination Early in the 20th Century 3. The Y Chromosome Determines Maleness in Humans Lecture discussion, 3 weeks Games, Use of multimedia materials, case study, library works, laboratory activities Quiz Graded recitation Board work Report (graded with rubrics) Participation in various activities (graded with rubrics) Laboratory Exercises 1. Techniques in Demonstrating Chromosomes Page 5 of 10 Learning Outcomes At the end of the unit, the students should be able to: 1. Explain the various terms relating to chromosome mutations. 2. Characterize and differentiate the various forms of chromosome mutations. 3. Relate chromosome mutation to chromosomal abnormality. Course Content Unit VI. Chromosome Mutations: Variation in Number and Arrangement 1. Variation in Chromosome Number: Terminology and Origin 2. Monosomy and Trisomy 3. Polyploidy 4. Deletion 5. Duplication 6. Inversion 7. Translocation 8. Fragile Sites in Human Chromosomes Teaching Strategies Time Allotment Use of multimedia materials, games, lecture discussion, model presentation 2 weeks Use of multimedia materials, games, lecture discussion, model presentation 2 weeks Evaluative Measures Quiz Model presentation (graded with rubrics) Laboratory Exercises 1. Karyotyping At the end of the unit, the students should be able to: 1. Explain the characteristics of the genetic material. 2. Recognize the evidences that led to the establishment of DNA as the genetic material in cells. 3. Describe the structure of DNA and RNA, including their physical and chemical properties. 4. State the similarities and differences between DNA and RNA. 5. Differentiate the alternative forms of DNA. Unit VII. DNA Structure and Analysis 1. Characteristics of the Genetic Material 2. DNA as the Genetic Material 3. Structure of DNA 4. Alternative Forms of DNA 5. Structure of RNA Quiz Model presentation (graded with rubrics) Laboratory Exercise 1. Extraction of DNA 2. Molecular Model Building of DNA Page 6 of 10 Learning Outcomes At the end of the unit, the students should be able to: 1. Relate the complete structure of DNA with its function. 2. Illustrate the semiconservative replication of DNA. 3. Compare and contrast DNA replication process between prokaryotes and eukaryotes. 4. Define DNA recombination and discuss its significance. Course Content Unit VIII. DNA Replication and Recombination 1. Semiconservative Replication 2. DNA Synthesis in Bacteria 3. DNA Replication in Eukaryotes 4. DNA Recombination Use of multimedia materials, lecture discussion Cooperative learning Time Allotment 2 weeks Evaluative Measures Quiz Board work activities Laboratory Exercise 1. Central Dogma of Molecular Genetics At the end of the section, the students Unit IX. The Genetic Code and should be able to: Transcription 1. Point out the characteristics of the 1. Characteristics of the Genetic genetic code. Code. 2. Diagram the process of transcription 2. Transcription Synthesizes RNA 3. Explain and illustrate the function of on a DNA Template. RNA polymerase. 3. RNA Polymerase Directs 4. Contrast the difference of eukaryote and Synthesis of RNA prokaryote transcription. 4. Differences Between Eukaryote 5. Demonstrate the function of introns in and Prokaryote Transcription eukaryotic genes. 5. Intervening Sequences – Introns, in Eukaryotic Genes Learning Outcomes Teaching Strategies Course Content Use of multimedia materials, lecture discussion Cooperative learning Teaching Strategies Quiz Recitation Written report Board work activities Seat work on the use of genetic code Time Allotment Page 7 of 10 Evaluative Measures At the end of the unit, the students should be able to: 1. Relate the structure of ribosomes to its function. 2. Explain and illustrate the process of translation 3. Compare prokaryote and eukaryote translation process. 4. Analyze various types of protein structures. 5. Describe protein function in relation to protein structure. Unit X. Translation and Proteins 1. Ribosome Structure and Function 2. Process of Translation 3. Eukaryotic Translation 4. Variation in Protein Structure 5. Functions of Proteins At the end of the unit, the students should be able to: 1. Compare genetic engineering and biotechnology 2. Recognize the significance of genetic engineering on agriculture and food science. 3. Identify the role of transgenic animals in biotechnology. 4. State the concept of synthetic biology. 5. Express the importance of genetic engineering in medical science and in gene therapy. 6. Critique and/or justify the ethical, social and legal impediments and outcomes on the acceptance and/or use of biotechnology and genetic engineering. Unit XI. Applications and Ethics of Genetic Engineering and Biotechnology 1. Uses of Genetically Engineered Organisms. 2. Agricultural Revolution – Influence of Genetic Engineering 3. Transgenic Animals 4. Emergence of Synthetic Biology 5. Transformation of Medical Diagnosis Using Genetic Engineering and Genomics 6. Gene Therapy 7. Ethical, Social, and Legal Questions on Genetic Engineering, Genomics, and Biotechnology. Learning Outcomes Use of multimedia materials, lecture discussion 2 weeks Quiz, recitation Research work Problem Solving Converting transcript to amino acid 2 weeks Quiz, recitation Research work Critic a journal article (graded with rubrics) critical analysis of current issues directly or indirectly involving genetic issues (absence and/or lack thereof) on government policies affecting public interest/ opinion (graded with rubrics) Library work, article analysis, small group sharing Course Content Use of multimedia materials, lecture discussion Library work, article analysis, small group sharing Teaching Strategies Time Allotment Page 8 of 10 Evaluative Measures At the end of the unit, students should be able to: 1. Explain genetic variation in populations. 2. Analyze gene frequency distribution using Hardy-Weinberg Law. 3. Discuss the effects of natural selection on changes on allele frequency. 4. Describe the effects of mutations in populations. 5. Explain how migration alters allelic frequencies. 6. Identify the concept of genetic drift and non-random matings. 7. Explain the meaning of speciation. 8. Illustrate evolutionary history using phylogeny. IV. Unit XII. Population and Evolutionary Genetics 1. Genetic Variation in Populations 2. The Hardy-Weinberg Law 3. Application of the HardyWeinberg Law on Human Populations. 4. Natural Selection for Allele Frequency Change 5. Mutations in Gene Pool 6. Migration and Gene Flow Alters Allele Frequency 7. Concept of Genetic Drift 8. Non-Random Matings 9. Genetic Factors Leading to Speciation 10. Analysis of Evolutionary History Using Phylogeny Use of multimedia materials, lecture discussion 2 weeks Quiz, recitation Research work Critic a journal article (graded with rubrics) Library work, article analysis, small group sharing Suggested Learning Activities lectures, recitations, discussions, experiments, research, drawings, reports, (written and oral), breeding of easily handled animals, and problem solving V. Evaluative Measures short and long quizzes, graded recitations, periodical examinations, laboratory exercises Page 9 of 10 VI. Textbook Klug, W. S., Cummings, M.R., Spencer, C.A., and Palladino, M. A., Essentials of Genetics. Eighth edition. Pearson Education. c. 2013. Other References Brooker, Robert J. Genetics, Analysis & Principles. 4th ed. Mc Graw-Hill Co., Inc. International ed., c. 2012 Hartl , Daniel L. Essential Genetics A Genomics Perspective. 6th edition. Sudbury, Massachusetts, Jones and Bartlett. c. 2013. Hartwell, Leland. Genetics: From Genes to Genomes. McGraw Hill Education, 2011. Hedrick, Philip W. Genetics of Population. Jones & Barlett Publishers, 2011 Hodge, Russ. Human Genetics: race population and disease, New York: Facts on File, c.2010. Matthew, Alex. Modern Genetics New Delhi, India: Adhyayan Publishers & Distributors, c2010. Russell, Peter J. Genetics: A Molecular Approach.3rd ed. San Francisco: Pearson/Benjamin Cummings,.c2010 Electronic Reference www.masteringenetics.com www.ncbi.nlm.nih.gov/sites/entrez?db=pubmed. www.omim.org. www.optigen.com www.vet.cam.ac.uk/idid/ www.guardian.co.uk/science/2008/aug/05/-genetics.korea www.ncbi.nlm.nih.gov/pubmed www.23andMe.com Prepared by: Chairman: Sgd. Mr. Ian Kenneth M. Cabrera Members: Sgd. Dr. Eufrecina Jean D.R. Ramirez Sgd. Agnes S. Magnaye Sgd. Alicia I. Yu www.microsort.net www.ncbi.nlm.nih.gov/Genbank/index.html www.ncbi.nlm.nih.gov/BLAST www.gendercide.org www.geron.com www.laskerfoundation.org/2006videoawards www.ClinicalTrials.gov www.raceandgenomics.ssrc.org/Lewontin Approved by Sgd. Dr. Zenaida D.R. Los Baños Head, Biological Sciences Department April 21, 2015 Page 10 of 10