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Genetics : Unit 1 Cell Cycle and Cancer 2012 – 2013 Chemical Constituents of Cells • The human body is composed of ____________________ of cells • Cells are constructed from numerous small molecules and _______________________________. • These include ___________________________ (simple sugars and polysaccharides), amino acids and _________________________, _________________ (fats and oils), and _____________________________ (nucleotides, DNA, RNA). • ______________________ are proteins that catalyze biochemical reactions that occur in the cell. • ________________________: set of proteins that a particular cell type can produce. • Expression of _____________________________________________ in different cells (and therefore • production of different proteomes) gives rise to over _____________ specialized cell types. Organelles • Organelles represent the ______________________________ in the cell and are involved in a variety of functions o The __________________ (storehouse of majority of DNA in the cell) has a double membrane and nuclear pores, which allow macromolecular traffic in and out of the nucleus. o The rough endoplasmic reticulum (ER), smooth ER, and Golgi body function as a _______________________________________________ for the synthesis of proteins and lipids targeted for delivery to the _______________________________, organelles, or for secretion o Secretions bud off in _____________________ and leave cell • • • A _____________________________________ has a double membrane whose inner folds carry enzymes that catalyze reactions that extract energy from nutrients; also contains small amounts of DNA. (The __________________________ in plant cells also contains a small amount of DNA) ________________________ contain enzymes that degrade cellular debris. ________________________ house enzymes that detoxify certain substances, break down lipids, and synthesize bile acids. 1|Page The Cell Cycle • The cell cycle consists of _________________________, when a cell is not dividing, and _____________. • ______________________: of interphase: proteins, lipids, and carbohydrates are produced • ______________________: DNA and proteins are made • ______________________: more proteins are produced; replicated chromosomes have two sister chromatids attached at their centromeres • The cell cycle is tightly controlled and regulated at several "__________________________________“ • Non-dividing cells may become arrested during interphase and enter a quiescent phase • _____________ • 2|Page _. Replication of chromosomes Replication is the process of ___________________________________________________ Occurs _____________________________________ in _______________________ of the cell cycle Replicated copies are called _______________________________________ Held together at _________________________________ Control of Mitosis • A cellular clock that limits the number of divisions is based on _____________________________________. • Crowding, hormones, and growth factors are _________________________________________ on mitosis. • Within cells, __________________ and _____________________ activate the genes whose products carry out mitosis Mitosis • Purpose: to make _____________________________________________ • Replicated chromosomes align at the _______________________________ plate. • _______________________________________________ separate and move to opposite poles • Nuclear membranes form around each new ________________________. • Division of cytoplasm or ________________________ occurs. • Prophase • Replicated chromosomes ___________________________________. • Microtubules organize into a _____________________________ • Nuclear membrane ____________________________________ • ____________________________ split and move toward opposite poles of the cell Metaphase 3|Page • Chromosomes line up on the ___________________________________________. • ________________________ microtubules are attached to centromeres of chromosomes. Anaphase • Centromeres of ____________________________________ separate • Chromosomes ____________________to opposite ends of the cell Telophase • Chromosomes ____________________________ of cell, diffuse into ______________________________ • Nuclear membranes __________________________ • ___________________________ disappears • Division of cytoplasm begins (____________________________________) • Cytokinesis • Cell ___________________________ in the middle and the two new cells separate • Cytokinesis is part of the ______________________________ of the cell cycle, but usually considered separate from mitosis; process begins during telophase and may continue after telophase is complete Apoptosis • Mitosis (cell division) and apoptosis (___________________________) are continuous processes that occur in a series of steps and are both initiated by signals in the extracellular environment • The balance between cell division and death ___________________________________ in growth, development, and repair • In prenatal development, coordination of these processes ______________________________________. After birth, mitosis and apoptosis ________________________________ the body. • Disruption of the balance between cell division and cell death can lead to _____________________ or other disorders • Programmed cell death is part of __________________ development 4|Page Cancer • • • • Cancer is a group of diseases caused by _______________________________________________. Cancer is associated with _______________________ uncontrolled cell growth. _____________________________ are substances which cause cancer by mutating DNA. Many genes that can _________________________to cause cancer control the cell cycle or DNA maintenance (repair). Origin of cancer • Cancer begins from the growth of a ________________________________ cell. • A mutation occurs allowing a cell to undergo cell division when it __________________________ normally divide. • ______________________________ produces more abnormal cells. • Mutations can occur: • In _______________________ cells => sporadic cancer only affecting the individual • In _______________________ cells => mutations that are inherited • _______________________ mutations usually require second somatic mutation also. Germline versus sporadic cancer Telomeres affect the cell cycle • • ________________________________ is the protein and enzyme complex that adds telomere sequences to the ends of chromosomes. Presence of telomerase and telomeres allows cells to pass a cell cycle _______________________ and divide. • When telomerase is absent, _________________________________ are not added. • Lack of telomeres signals ____________________________ of cell division. Cancer can progress slowly over years 5|Page Types of cancer genes Type of gene Tumor suppressor gene Normal function Promotes division Mutated function Promotes division abnormal time or cell type Suppresses cell division Fails to suppress division DNA repair gene mutation Fail to repair DNA mutations Types of proteins Growth factors Enzymes for mismatch or excision repair Characteristics of cancer cells • • • • • • • • • Divide _________________________ (given space and nutrients) _________________________________________: cells with mutations have daughter cells which inherit the same mutations. ________________________: cells lose their specialized identity ___________________________________: reflects dedifferentiation _____________________________________: will divide in a crowd of cells and pile on top of each other Induce _________________________________ (local blood vessel formation) Increased _________________________ rate _____________________________: squeeze into any space available _____________________________: cells move to new location in the body Oncogenes • _________________________________________ are normal versions of genes which promote cell division. • Expression at the _________________________ or in the wrong cell type leads to cell division and cancer. • Proto-oncogenes are called ___________________________ in their mutated form. • ______________________________ of an oncogenic mutation is sufficient to promote cell division. Tumor suppressor genes • Cancer can be caused by loss of genes that ______________________ cell division. • Tumor suppressor genes _________________________ stop a cell from dividing. 6|Page • Mutations of ____________________ of a tumor suppressor gene is usually required to allow cell division. p53 coordinates cell cycle regulation • p53 acts as a cell cycle protein which determines if a cell has ____________________________________. If damage cannot be repaired, p53 can induce ___________________________. • More that ___________ of human cancers involve an abnormal p53 gene. • Rare _____________________________ mutations in the p53 gene cause a disease called Li-Fraumeni syndrome in which family members have many different types of cancer at early ages. BRCA1, a breast cancer susceptibility gene • Within families a mutation in BRCA1 leads to ______________________________ susceptibility, inherited as a dominant trait. • __________________ mutation in the BRCA1 gene is inherited. • Tumors in people ______________________________________ mutation in the normal allele of BRCA1. • Lack of any functional BRCA1 leads to ____________________ cells. • At the level of the ______________, BRCA1 acts in a recessive manner. Cancer treatments for breast cancer Strategy Examples Remove cancerous tissue Destroy cancerous tissue ________________________________________ to kill dividing cells Use phenotype to select drug ____________________ receptor positive women take tamoxifen Use _________________________ to select drug Her-2/neu positive cancers targeted with herceptin MAb _________________________ level Gene expression profile on DNA microarray to guide drug choice Environment impacts cancer • Exposure to _______________________________ • Carcinogens in _________________________________ are correlated with lung cancer incidence. • Exposure to _________________________ • Burns from overexposure to ______________________ can cause skin cancer. • Variation in ______________ • Fatty diets are correlated with increased ______________________ and increased breast cancer. Cruciferous vegetables can lower cancer risk 7|Page Inside Cancer: Human Papilloma Virus HPV: Introduction HPV comprises a group of small viruses with a double stranded DNA genome of about __________________ With ________________________ different types, HPV infects _______________________________ and cause lesions ranging from external warts, cervical lesions, and cancer. HPV: Low Risk and High Risk types HPV’s are classified into low risk or high risk type: 1. Low-risk types _____________________ are mostly associated with genital warts, and only rarely associated with cancer 2. High risk types _____________________ 31, 33, 35 are associated with cervical tumors (pre-cancer and malignant): HPV _____________ is the most prevalent type in both low grade and cervical tumors , with HPV 16 DNA found in _______________ of cervical cancer. HPV Evolutionary Groups HPV’s are contained within ___________________________________ groups: Alpha, Beta, Gamma, Mu, and Nu. Alpha group contains HPV types that infect the _________________ and contains over 60 members. Beta, Gamma, Mu, and Nu primarily infect _______________ 90% of currently classified HPV’s belong to the __________________________________ group How does HPV infect cells? HPV infects ____________________________________ of the epithelial lining. These are actively dividing cells that will mature into squamous epithelial cells. 8|Page HPV infection Infection occurs in the basal cell layer and results in the establishment of _________________________ that does not ___________________ into host DNA Stimulation of cell growth: is caused by HPV oncoproteins E6 and E7 which drive the cell into __________________________. Basal cells normally _________________________________, but E6 and E7 viral proteins override the normal cell cycle control in infected cells HPV Productive vs Abortive Infection Productive Infection Abortive Infection Tightly regulated gene expression Viral gene expression is de-regulated Results In _______________________________ The ‘normal’ life cycle of the virus is no longer complete; no new virus produced Inactivation of major ___________________________________ proteins Produces new infective viruses abnormal cell division Normal Squamous epithelium The _____________________________ show maturation from basal layer to surface. Abnormal Squamous Epithelium This is cervical squamous dysplasia at high magnification extending from the center to the right. The epithelium is normal at the left. Note how the dysplastic (abnormal) cell nuclei are _______________________________, and the dysplastic cells have a disorderly arrangement. Squamous cell carcinoma At high magnification, areas of neoplastic (__________________) squamous cells 9|Page precursor to __________________ Tumor Suppressor Proteins p53: 1) activates p21 ______________ inhibitor progression inhibits Cdk-cyclin inhibits 2) ____________________________________ pRb binds and inactivates transcription factor E2F inhibits Cdk2CyclinE inhibits ________________________ progression HPV: Early and late gene expression Viral Protein Function E1 E2 E4 E5 E6 E7 Initiation of DNA replication- viral genome amplification Transcriptional regulation-viral genome amplification Role in genome amplification not fully understood Transmembrane protein found in the ER- involved in EGF-mediated receptor signalling Binds to and mediate p53 tumor suppressor protein degradation, activates telomerase Binds to and degrades pRB and mediates E2F expression of cellular proteins required for S-phase progression. Binds to and inactivates p21 L1 Formation of infectious virions L2 Allows genome packaging to begin Stages of HPV life cycle Stage Infection of basal cells: Expression of viral proteins Viral DNA transferred to nucleus by L2 capsid 1. Genome maintenance E6/E7 2. Genome maintenance Cell Proliferation (growth) 3. Genome Amplification E6/E7 4. Virus Assembly Virus release pRB inactivation by E7 oncoprotein Cytological Diagnosis of HPV lesions 10 | P a g e E6/E7 E6/E7 E1/E2/E4/E5 E1/E2/E4/E5 E1/E2/E4/E5 E4/L1/L2 cell cycle Cervical tumors are most often caused by HPV and characterized by the appearance of ___________________________________ cells with an ______________________________________ CIN (cervical intra-epithelial neoplasia) is diagnosed by increasing severity: CIN 1- _____________________________________ CIN 2- _____________________________________ CIN 3- ________________- CIS ( carcinoma in-situ) HPV statistics Approximately ______________________________ people are currently infected with genital human papillomavirus (HPV) in the United States (U.S.).1 Every year, about _____________________________ are diagnosed with cervical cancer, and almost ________ women die from this disease in the U.S.3 About ____________ of sexually active men and women in the U.S. have genital warts at any given time.4 Prevalence of HPV infection among sexually active females QuickStats: Prevalence of HPV* Infection† Among Sexually Active Females Aged 14--59 Years, by Age Group --National Health and Nutrition Examination Survey, United States, 2003--2004 Prevalence of high risk and low-risk types among females 14 to 59 years of age Figure 43. Human papillomavirus (HPV) — Prevalence of high-risk and low-risk types among females _______________________ years of age reported from a national survey, 2003–2004 Note: Error bars indicate _____________________________________. Both high-risk and low-risk HPV types were detected in some females. SOURCE: National Health and Nutrition Examination Survey JAMA, 2007, 297;813–819 Copyright © 2007, American Medical Association. All Rights reserved. HPV vaccine: Gardasil 11 | P a g e In June 2006 the FDA licensed Gardisil, the first vaccine developed to protect against genital warts and _____________________________________________. The vaccine has been widely tested in females ________________ around the world. This _______________________________ vaccine works by preventing four HPV types: HPV _______________, which cause ________________ of cervical cancers, and HPV _________________________, which cause ________ of genital warts. The vaccine has no ___________________________________ on HPV-related disease. 12 | P a g e