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Chapter 10 The Basic Principles of Heredity Lecture Outline I. Mendel first demonstrated the principles of inheritance A. Other plant breeders at the time of Mendel knew two main facts 1. Hybrid offspring with the same two kinds of parents are similar 2. When hybrid offspring are self-fertilized, their offspring show a variety of traits B. Mendel did his experiments primarily on the garden pea, Pisum sativum 1. Peas were easy to grow, and many varieties were readily available 2. Peas may be self or cross fertilized as they have perfect flowers a. Pollen from an anther may be dusted onto a stigma b. Cross fertilization may be prevented by bagging the flower 3. Mendel developed true-breeding lines True-breeding plants, when self-pollinated, produce offspring all possessing the same visible trait as the parent (e.g. the same phenotype) 4. Mendel chose 7 clearly identifiable pairs of contrasting traits and accompanying true-breeding plants 5. Mendel first crossed true-breeding plants with contrasting traits a. These parental plants (the P generation) produced the first filial generation (the F1 generation) b. The F1 generation plants all possessed the trait of only one of two parents c. When the F1 plants self pollinate, the resulting F2 generation had characteristics of both of the P generation plants d. These experiments showed that the hereditary factors had not been lost in the F1 generation, but somehow masked C. Mendel’s experiments disproved the ideas of blending inheritance Mendel proposed that inherited characteristics are controlled by two “factors” (genes in modern terminology) D. The principle of segregation states that alleles separate before gametes are formed 1. The alleles from the male and female gametes do not mix in any way (the law of segregation) 2. Segregation is due to the separation of homologous chromosomes during meiosis E. Mendel’s results were published in 1866 in the transactions of Brünn Society for the Study of Natural Sciences F. Mendel’s work was independently rediscovered by DeVries, Correns, and von Tschermak. *Sutton, in 1903 associated Mendel’s work and meiosis G. Alleles occupy corresponding loci on homologous chromosomes 1. The term locus may refer to the location of a gene on a chromosome, as well as the type of gene controlling a characteristic 2. Alleles are the variations of a gene that govern the same feature 3. Alleles are denoted by a letter or letters, dominant genes are typically denoted by a capital letter, recessive genes with a lower case letter II. A monohybrid cross involves individuals with different alleles of a given locus A. A monohybrid cross is the mating of two individuals that have different genes at a single locus B. Heterozygotes carry two different alleles of a particular locus; homozygotes carry identical alleles Heterozygotes have a recessive and dominant allele for a particular characteristic Both Parents are Homozygous Both Parents are Heterozygous Father is Homozygous Dominant Mother is Homozygous Recessive C. A Punnett square predicts the ratios of genotypes and phenotypes of the offspring of a cross 1. Heterozygous organisms produce equal numbers of gametes possessing dominant or recessive alleles 2. Punnett squares allow one to determine the likely outcome of a genetic cross Go to : http://www.changbioscience.com/genetics/punnet t.html for a Punnett Square calculator D. The phenotype of an individual does not always reveal its genotype 1. Heterozygotes express the dominant trait; the recessive trait is masked 2. The appearance of the individual is the phenotype 3. The genetic makeup of the individual is the genotype 4. The phenotype of the homozygous dominant and the heterozygous is typically identical 5. Traits that are dominant in one species may be recessive in another E. A test cross can detect heterozygosity A test cross is a cross between an individual expressing the dominant phenotype, and a homozygous recessive Note that the homozygous dominant and heterozygote have indistinguishable phenotypes, but different genotypes III. The laws of probability predict the likelihood of genetic events A. The product rule predicts the combined probabilities of independent events 1. Events are independent if the occurrence of one does not affect the probability of the occurrence of the other 2. To determine the outcome of such a cross, the independent probabilities are multiplied B. The sum law predicts the combined probabilities of mutually exclusive events Outcomes that may be the result of either of two different events may be predicted by summing the probabilities C. The laws of probability can be applied to a variety of calculations Recall that the rules of chance have no “memory” Go to: http://www.athro.com/evo/gen/punexam.html for probability practice Punnet squares IV. A dihybrid cross involves individuals that have different alleles of two loci Practice dihybrid crosses and tutorial info is available at the following website: http://www.biology.arizona.edu/mendelian_genetics/proble m_sets/dihybrid_cross/dihybrid_cross.html A. If a dihybrid cross involves different loci on nonhomologous chromosomes, independent assortment occurs B. The principle of independent assortment states that the alleles of different loci on non-homologous chromosomes are randomly distributed into gametes Mendel’s dihybrid crosses illustrated this principle C. The mechanics of meiosis are the basis for independent assortments This process occurs during metaphase I of meiosis D. Linked genes do not assort independently 1. The principle of independent assortment does not apply to loci on the same homologous pair of chromosomes 2. Crossing-over may skew the proportions of expected phenotypic outcomes V. The linear order of linked genes on a chromosome is determined by calculating the frequency of crossing-over Go to the link below to do a practice problem: http://www.ansci.cornell.edu/courses/as221/pp/pp24.html A. During crossing-over during prophase I, segments of chromosomes are exchanged The percentage of crossing-over is computed by adding the number of individuals in the recombinant classes and dividing by the total number of offspring and multiplying by 100 B. Genes that are close together often are exchanged together C. The distance between two genes of a chromosome is measured in map units 1. Map units measure the percentage of crossingover 2. One map unit represents 1% recombination D. A linkage group is composed of all the genes on a particular chromosome; they typically are inherited together The number of linkage groups is equal to the number of pairs of chromosomes E. Linkage maps are being determined for the fruit fly, the mouse, yeast, Neurospora (a mold), and humans to name a few VI. Sex is commonly determined by special chromosomes A. The majority of animals have sex chromosomes which determine the sex of the individual 1. The homogametic sex will have a pair of identical sex chromosomes Human females are homogametic; having two X chromosomes 2. The heterogametic sex has two different sex chromosomes Human males are heterogametic; having one X and one Y chromosome 3. The autosomes are not sex-determining chromosomes B. The Y chromosome determines male sex in most species of mammals 1. A person with the XXY condition (Klinefelter syndrome) is male 2. A person with Turner syndrome (a single X chromosome) is phenotypically female 3. The x and Y chromosomes are not truly homologous, carrying different genetic components 4. Sperm containing an X chromosome and those containing a Y chromosome are produced in equal numbers; slightly more male embryos are produced, slightly more male babies are born (106 boys for 100 girls) C. X-linked genes have unusual inheritance patterns 1. The Y chromosome contains few genes, but important, genes for maleness 2. Genes located on the X chromosome are called X-linked (older terminology; sex-linked) 3. Males are hemizygous for X-linked traits; they cannot be carriers for X-linked traits 4. X-linked traits may be denoted as XC for a dominant allele and Xc for a recessive allele; the Y chromosome has no superscripts 5. For most X-linked genes, the dominant form is a normal form 6. A female expressing an X-linked trait must have had a father with that trait and a heterozygous (“carrier”) mother; therefore, they are rare 7. A male expressing an X-linked trait typically had a father without that trait and a heterozygous (“carrier”) mother D. Dosage compensation equalizes the expression of X-linked genes in males and females 1. Typical females have two X chromosomes; males have one a. Dosage compensation in mammals involves the inactivation of one X chromosome in female cells b. Fruit fly males accomplish this by making their single X chromosome more active 2. The Barr body is a dark area of highly condensed chromatin, and is the single inactive X chromosome in female cells Barr bodies (b) 3. The expression of a single X chromosome results in mottled color of a calico cat (nearly always they are females) 4. Variegation is the result of X chromosome inactivation a. Inactivation happens randomly in cells, relatively early in embryological development b. Resulting clones of cells have the same X chromosome inactivated E. Sex-influenced genes are autosomal, but their expression is affected by the individual’s sex 1. Pattern baldness in humans is an example, as it is most common in males, although not unknown in females 2. Persons with the genotype B1 B1 show baldness in either sex 3. Persons with the genotype B1 B2 show baldness if male VII. The relationship between genotype and phenotype is often complex A. A single pair of alleles may control several characteristics; in contrast, many alleles may control a single trait B. Dominance is not always complete 1. Pink four o’-clock flowers result from a cross between a plant with red flowers and a plant with pink flowers Incomplete dominance results when neither allele is dominant to the other, and the phenotype is intermediate 2. Codominance results when the offspring has characteristics of both alleles a. In cows, a reddish coated cow mating with a white coated cow will produce a calf with a roan coloration, with both red and white hairs b. The human ABO blood group alleles are an example C. Multiple alleles for a locus may exist in a population 1. The human ABO blood group is also an example of multiple alleles 2. In rabbits, variations of the “C” gene result in rabbits with quite varied coat colors D. A single gene may affect multiple aspects of the phenotype Multiple effects of a single gene is referred to as pleiotropy Many genetic diseases are pleiotropic, e.g. cystic fibrosis and sickle cell anemia E. Alleles of different loci may interact to produce a phenotype 1. These interactions result in variations from typical expected Mendelian ratios of crosses 2. Epistasis is the interaction between genes, such as that one gene can influence the affect of another gene The gene causing albinism would hide the gene controlling color of a person's hair F. Polygenes act additively to produce a genotype 1. Multiple, separate genes have similar and additive effects on the morphological feature 2. Height and skin color are simple examples in humans 3. The F1 generation has phenotypes intermediate between the homozygous parents, and the F2 generation shows wide variation in phenotype 4. Bell-shaped curves (a normal distribution) are indicative of polygenes VIII. Selection, inbreeding, and out-breeding are used to develop improved strains A. Inbreeding leads to organisms homozygous for many genes, some of which may be harmful In humans, marriage between close relatives is forbidden B. Out-breeding results more heterozygous allelic pairs, resulting in hybrid vigor 1. The cause of hybrid vigor is not fully understood a. The vigor may be due to the lack of expression of deleterious recessive genes b. Most of the corn, wheat, and other crops grown in the United States are hybrids; produced each year by crossing the original strains c. The seeds of the F1 generation are eaten, not planted the following year 2. Hybrid vigor may also be due to heterozygote advantage a. Heterozygote advantage refers to some positive attribute possessed by the heterozygote which is not possessed by either the dominant or recessive homozygote b. Sickle cell anemia is an example; diseased persons have the genotype ss, noncarriers SS, and heterozygotes Ss c. Heterozygotes for the sickle-cell trait are more resistant to malaria d. The sickle-cell trait is relatively common in persons living in areas with high rates of malaria (or persons descended from those areas)