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Nile University The Department of Biology C&M-111: Cells and Molecules Module information: 2016-2017 Symbol & name: Audience: Prerequisites: Contact Hours: Credit Hours: Duration: Evaluation: C&M111, Cells & Molecules Freshmen, Semester (1) Medicine Program None 2, 1-Hour per week lectures 1, 3-Hours per week practical 3 (2+1) 15 weeks Lab work, records & tests: Mid semester examination: Assignment, tutorials & quizzes End of Semester examination: Per Lab instructors (10%) One 1-hour, Theory (20%) Per instructor (10%) One 3-hour, Theory (40%) One 3-hour Practical (20%) GOALS AND OBJECTIVES Goals: The module introduces the students to major concepts of cell biology: the chemical & molecular basis of life, with emphasis on the functional contributions to homeostasis of the cell membranes, intracellular components, and the variety of cells. The course provides a fundamental core of knowledge and skills which will facilitate transition to the next level medical sciences such as Molecular Genetics, Biochemistry, Physiology, Histology, Oncology, Microbiology, and Pathology. Learning Objectives: Students will: Learn the basic rules of working in a biology laboratory, including the proper and effective use of the microscope and other tools and the safe handling of material. Proper attitude and safe dress code while working in a laboratory Recognize and prevent harm due to hazards encountered in the laboratory: biological, chemical & physical Know the anatomy of the visible-light microscope, handling, uses and operative maintenance Grasp the basic concepts of the fine structure and function of cells and organelles, and the different types of cells. Be familiar with the cell theory as basis for understanding the characteristics of living things Describe protoplasm and the architecture of a typical cell (light & electron microscopy) Structure, properties and functions of the cell membrane (permeability & electrical properties); the significance of constant non-equilibrium between the cell and the interstitial space.DNA structure and configurations: Replication, transcription and translation; circular DNA, nucleus & nuclear membrane The nature of organelles and specific operative functions: Ribosomes & protein synthesis, Mitochondria & energy transactions, the ER, Golgi bodies & vacuoles, the cytoskeleton Study the origin of cells (meiosis & mitosis): Sexual reproduction, early embryonic development, tissue development and regeneration. The cell cycle, processes & controls, cellular multiplication (binary fission, conjugation & mitosis) & genetic controls, meiosis & gametogenesis, crossing-over & Intraspecific genetic diversification Understand the chemical & molecular mechanisms of life and the importance of water. The properties of water, Intra- & inter-cellular communication; signal origins, reception, transduction, & response Be familiar with the dynamic nature and activities of the cell membranes, and their contribution to homeostasis and the diversified specific cell functions. The dynamic architecture of the plasmalemma, selective permeability, diffusion, osmosis, endocytosis, exocytosis, membrane receptors, MHC, membrane proteins, channels, electrical properties Review the structure, replication, and recombination of chromosomes; transcription & gene regulation, the genetic code, translation, and mutations DNA structure, replication, transcription, translation, enzyme mechanisms: helicase/polymerase, intracellular signals, codons Be knowledgeable of modern advances in applications of molecular biology in the medical field (Nano-technology & Pharmacogenetics). COURSE CONTENT: Lecture topics: (These topics are to be delivered in 15, 11/2 hour lectures. Topic (1): Course description, characteristics of living things at the cellular & molecular levels, the relevance of biology to the medical sciences. Topic (2): The chemical & cellular basis of life: structure, nomenclature. Biomacromolecules and their monomers & related metabolic processes: carbohydrates, lipids, proteins and nucleic acids. Topic (3): The Cell Theory, the Gene Theory, cell multiplication (binary fission, conjugation, mitosis & meiosis) Topic (4): Cellular organization: the structure of a typical cell, the two basic types of cells, characteristics of eukaryotes in comparison to bacterial cells. Topic (5): Properties, and physiology of cell membranes; membrane properties, electrical potential and transport activity. Topic (6): Cellular communication, chemical & physical signals, signal transduction in health and disease, signal transduction, and cellular transformation. Topic (8): Structures and composition of the nucleus, chromosomes, nucleic acids, and the human genome. Topic (9): Chromosomal replication and recombination, Transcription, translation, mutations and gene regulation. Topic (10): Gametogenesis, fertilization & early embryonic development Topic (11): The diversity of cells: types of tissue components. Topic (12): Heredity and Mendelian genetics. Topic (13): The cell cycle, cell aging, programmed cell death and aberrant cell development. Topic (14): Energy harvesting in the cell, autotrophy & heterotrophy, ADP/ATP & electron transfer, and the role of enzymes & coenzymes in cellular activities. Topic (16): The principles of tissue culture, genetic engineering and recombinant DNA technology, nucleic acid manipulations and the PCR method. Case Studies Lung cancer, HIV/AIDS, Glycogen storage disease, Down syndrome (amniocentesis & genetic counselling), Cystic fibrosis, Sickle-cell disease, TaySachs disease, Hemophilia, Phenylketonuria, and Huntington’s disease. Textbooks: 1. Stansfield, W. D., J. S. Colome and R. J. Cano (1996). “Schaum’s Outline of Theory and Problems of Molecular and Cell Biology”, McGraw-Hill, New York, London, Toronto, etc. 2. Raven, Peter H. & George B. Johnson: Biology, ed. 4, Wm. C. Brown Publishers, London, 1996. 3. Alberts, B., D. Bray, J. Lewis, M. Raff, K. Roberts, and J Watson (1994). “Molecular Biology of the Cell”, ed. 3, Garland Press, New York. Nile College: Biology Department Program: Medicine. Module: …Cells and Molecules: MD C&M 111… Class/Year: …First Year…. Semester:…… Semester (1)…… Course delivery: Proposed Lectures’ Plan Staff Coordinators: Uz. Fatma M. Najeeb, M. Sc. & M. Sidahmed Hussein, Ph. D. Duration: 09 /…November…/2016, to: 22 / February /…2017 Week Day/Date Time Lecture Topics 1. Wed 9 Nov 08:30-09:20 09:30-10:20 2. Wed 16 Nov 08:30-09:20 09:30-10:20 3. Wed 23 Nov 08:30-09:20 09:30-10:20 4. Wed 30 Nov 08:30-09:20 09:30-10:20 Module description - Expectations, rules and regulations √ The Characteristics of Living Things √ Water, pH, and Chemistry of living things √ Biological Molecules: introduction √ The Cell: cellular basis of life, the Cell Theory; The general structures, prokaryotes, eukaryotes. +Organelle functions √ The diversity of cells (Bacteria, plants, fungi, protists & multicellular animals) √ 5. Wed 07 Dec 08:30-09:20 09:30-10:20 6. Wed 14 Dec 7. 8. 9. Room Lecturer/s LT 403 M Sidahmed LT 403 M Sidahmed LT 403 F Najeeb LT 403 F Najeeb The cell cycle and controls, Apoptosis √ LT 403 M Sidahmed 08:30-09:20 09:30-10:20 Cellular multiplication: budding, binary fission, mitosis & meiosis √ LT 403 M Sidahmed Wed 21 Dec 08:30-09:20 09:30-10:20 The nucleus & Nucleic Acid ; DNA repair & replication √ LT 403 M Sidahmed Wed 28 Dec 08:30-09:20 09:30-10:20 DNA & transcription, translation & Protein synthesis √ LT 403 Uz. Fatima Mid-Semester Examinations: 31 December 2016 – 08 January 2017 10. Wed 08:30-09:20 Proteins + Quiz Lecture 7 11 Jan ‘17 09:30-10:20 LT 403 M Sidahmed 11. Wed 18 Jan 08:30-09:20 The Cell Membrane: structure & functions 09:30-10:20 LT 403 Prof MYS 12. Wed 25 Jan 08:30-09:20 Cellular communication in health & disease 09:30-10:20 LT 403 M Sidahmed 13. Wed 01 Feb 08:30-09:20 1. Inheritance & Mendel’s laws 2. Human Genetic Abnormalities 09:30-10:20 LT 403 M Sidahmed 14. Wed 8 Feb. 08:30-09:20 Carbohydrates & Lipids 09:30-10:20 LT 403 M Sidahmed 15. Wed 15 Feb. 08:30-09:20 Energy Transactions in the cell: The mitochondria 09:30-10:20 LT 403 M Sidahmed 16. Wed 22 Feb. 08:30-09:20 The variety of mammalian tissues; introduction to histology 09:30-10:20 LT 403 M Sidahmed 17. Pre-exam Break: ……24 Feb. – 3 March, 2017.………………………. 18. (End of Semester Examinations: 4-23 March, 2017)