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Genetics Inheritance Genetics Notes Who is Gregor Mendel? “Father of Genetics” Principle of Independent Assortment – Inheritance of one trait has no effect on the inheritance of another trait Traits • Genetics – study of how traits are passed from parent to offspring • Traits are determined by the genes on the chromosomes. A gene is a segment of DNA that determines a trait. • Chromosomes come in homologous pairs, thus genes come in pairs. Homologous pairs – matching genes – one from female parent and one from male parent • Example: Humans have 46 chromosomes or 23 pairs. One set from dad – 23 in sperm One set from mom – 23 in egg • One pair of Homologous Chromosomes: Gene for eye color (blue eyes) Homologous pair of chromosomes Gene for eye color (brown eyes) Alleles – different genes (possibilities) for the same trait – ex: blue eyes or brown eyes Dominant and Recessive Genes • Gene that prevents the other gene from “showing” – dominant • Gene that does NOT “show” even though it is present – recessive • Symbol – Dominant gene – upper case letter – T Recessive gene – lower case letter – t Dominant color Recessive color Example: Straight thumb is dominant to hitchhiker thumb T = straight thumb t = hitchhikers thumb (Always use the same letter for the same alleles— No S = straight, h = hitchhiker’s) Straight thumb = TT Straight thumb = Tt Hitchhikers thumb = tt * Must have 2 recessive alleles for a recessive trait to “show” • Both genes of a pair are the same – homozygous or purebred TT – homozygous dominant tt – homozygous recessive • One dominant and one recessive gene – heterozygous or hybrid Tt – heterozygous BB – Black Bb – Black w/ white gene bb – White Genotype and Phenotype • Combination of genes an organism has (actual gene makeup) – genotype Ex: TT, Tt, tt • Physical appearance resulting from gene make-up – phenotype Ex: hitchhiker’s thumb or straight thumb Punnett Square and Probability • Used to predict the possible gene makeup of offspring – Punnett Square • Example: Black fur (B) is dominant to white fur (b) in mice 1. Cross a heterozygous male with a homozygous recessive female. Black fur (B) Heterozygous male White fur (b) White fur (b) Homozygous recessive female White fur (b) Male = Bb X Female = bb b Male gametes - N (One gene in sperm) B b b Bb Bb bb bb Female gametes – N (One gene in egg) Possible offspring – 2N Write the ratios in the following orders: Genotypic ratio = 2 Bb : 2 bb 50% Bb : 50% bb Genotypic ratio homozygous : heterozygous : homozygous dominant recessive Phenotypic ratio = 2 black : 2 white 50% black : 50% white Phenotypic ratio dominant : recessive Sex Determination • People – 46 chromosomes or 23 pairs • 22 pairs are homologous (look alike) – called autosomes – determine body traits 1 pair is the sex chromosomes – determines sex (male or female) • Females – sex chromosomes are homologous (look alike) – label XX Males – sex chromosomes are different – label XY Crossing involving 2 traits – Dihybrid crosses • Example: In rabbits black coat (B) is dominant over brown (b) and straight hair (H) is dominant to curly (h). Cross 2 hybrid rabbits and give the phenotypic ratio for the first generation of offspring. Possible gametes: BbHh X BbHh BH BH Gametes Bh Bh bH bH BH bh bh BH Bh bH bh BBHH BBHh BbHH BbHh Phenotypes - 9:3:3:1 9 black and straight Bh BBHh BBhh BbHh Bbhh 3 black and curly 3 brown and straight 1 brown and curly bH BbHH BbHh bbHH bbHh bh BbHh Bbhh bbHh bbhh Independent Assortment and Segregation during Meiosis Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. A B A Aa a B Bb b A A B B AB A B a a a b b b ab a b A a B b A A A b b b Ab A Parent cell has two pairs of homologous chromosomes. A Aa a b bB B b a a B B a B aB a B All orientations of homologous chromosomes are possible at metaphase I in keeping with the law of independent assortment. 15 At metaphase II, each daughter cell has only one member of each homologous pair in keeping with the law of segregation. All possible combinations of chromosomes and alleles occur in the gametes as suggested by Mendel's two laws. Exceptions To Mendel’s Original Principles • • • • • • • • Incomplete dominance Codominance Multiple alleles Polygenic traits Epistasis pleiotropy Sex-linked traits Gene-linkage Incomplete dominance • Neither allele is dominant and heterozygous individuals have an intermediate phenotype that has a blended appearance P Generation White CW CW Red CRCR CR Gametes CW Pink CRCW F1 Generation • For example, in Japanese “Four o’clock”, plants with one red allele and one white allele have pink flowers: Gametes Eggs F2 Generation 1⁄ 2 1⁄ 2 1⁄ 2 CR 1⁄ 2 CR 1⁄ 2 CR 1⁄ 2 CR CR Cw CR CR CR CW CR CW CW CW Sperm Incomplete Dominance Gametes CR CW CRCR CRCW CRCW CWCW CRCR CR Gametes CW F1 generation All CRCW F2 generation CWCW 1:2:1 Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. Codominance • Neither allele is dominant and both alleles are expressed in heterozygous individuals • Example ABO blood types Polygenic Traits • Most traits are not controlled by a single gene locus, but by the combined interaction of many gene loci. These are called polygenic traits. • Polygenic traits often show continuous variation, rather then a few discrete forms: Polygenic Traits Gene 2 Trait Gene 3 Polygenic traits traits controlled by more than one gene or allele pair; gives perception of varying degrees of pigment Ex. skin color (3- 7 genes) Multiple Alleles • 3 or more alleles of the same gene that code for a single trait • In humans, blood type is determined by 3 alleles – A, B, and O BUT each human can only inherit 2 alleles 1. Dominant – A and B (codominance) Recessive – O 2. Blood type – A = AA or AO B = BB or BO AB = AB O = OO Multiple alleles – determined by a single gene that has at least four different alleles. Ex: rabbit fur, blood types The 4 different allele possibilities are: C = dark gray c= no color or white cch= peppered coloring ch = color on ears, nose, tips of feet Epistasis • Type of polygenic inheritance where the alleles at one gene locus can hide or prevent the expression of alleles at a second gene locus. • Labrador retrievers one gene locus affects coat color by controlling how densely the pigment eumelanin is deposited in the fur. • A dominant allele (B) produces a black coat while the recessive allele (b) produces a brown coat • However, a second gene locus controls whether any eumelanin at all is deposited in the fur. Dogs that are homozygous recessive at this locus (ee) will have yellow fur no matter which alleles are at the first locus: Epistasis ee No dark pigment in fur eebb Yellow fur eeB_ Yellow fur E_ Dark pigment in fur E_bb Brown fur Copyright © The McGraw-Hill Companies, Inc. Permission required for reproduction or display. E_B_ Black fur Pleiotropy • This is when a single gene locus affects more than one trait. • For example, in Labrador retrievers the gene locus that controls how dark the pigment in the hair will be also affects the color of the nose, lips, and eye rims. Pleiotropy – one gene controls many sometimes unrelated traits; gene codes for substance widely used throughout the body so lack of it has effect in many areas Ex. PKU (phenylketonuria) inability to process phenylalinine results in build up of amino acid causing mental retardation, reduction of pigment in hair and skin Environmental Effects on Gene Expression • The phenotype of an organism depends not only on which genes it has (genotype), but also on the environment under which it develops. • Although scientists agree that phenotype depends on a complex interaction between genotype and environment, there is a lot of debate and controversy about the relative importance of these 2 factors, particularly for complex human traits. Patterns of Inheritance Disorders Inherited as Recessive Traits –Autosomal Recessive Over a thousand human genetic disorders are known to have Mendelian inheritance patterns. Each of these disorders is inherited as a dominant or recessive trait controlled by a single gene. Most human genetic disorders are recessive. A particular form of deafness is inherited as a recessive trait. Many human disorders follow Mendelian patterns of inheritance Cystic fibrosis, which strikes one out of every 2,500 whites of European descent but is much rarer in other groups. One out of 25 whites (4% ) is a carrier. The normal allele for this gene codes for a membrane protein that functions in chloride ion transport between certain cells and the extracellular fluid. These chloride channels are defective or absent. The result is an abnormally high concentration of extracellular chloride, which causes the mucus that coats certain cells to become thicker and stickier than normal. Tay-Sachs disease is caused by a dysfunctional enzyme that fails to break down brain lipids of a certain class. Is proportionately high incidence of Tay-Sachs disease among Ashkenazic Jews, Jewish people whose ancestors lived in central Europe Sickle-cell disease, which affects one out of 400 African Americans. Sickle-cell disease is caused by the substitution of a single amino acid in the hemoglobin protein of red blood cells Dominantly Inherited Disorders – Autosomal Dominant Achondroplasia, a form of dwarfism with an incidence of one case among every 10,000 people. Heterozygous individuals have the dwarf phenotype. Huntington’s disease, a degenerative disease of the nervous system, is caused by a lethal dominant allele that has no obvious phenotypic effect until the individual is about 35 to 45 years old. Sex – linked Traits • Genes for these traits are located only on the X chromosome (NOT on the Y chromosome) • X linked alleles always show up in males whether dominant or recessive because males have only one X chromosome • Examples of recessive sex-linked disorders: 1. colorblindness – inability to distinguish between certain colors You should see 58 (upper left), 18 (upper right), E (lower left) and 17 (lower right). Color blindness is the inability to distinguish the differences between certain colors. The most common type is red-green color blindness, where red and green are seen as the same color. 2. hemophilia – blood won’t clot 3. Sex-Linked Disorders in Humans Duchenne muscular dystrophy, affects about one out of every 3,500 males born in the United States. People with Duchenne muscular dystrophy rarely live past their early 20s. The disease is characterized by a progressive weakening of the muscles and loss of coordination. Researchers have traced the disorder to the absence of a key muscle protein called dystrophin and have tracked the gene for this protein to a specific locus on the X chromosome. Posture changes during progression of Duchenne muscular dystrophy. Hemophilia is a sex-linked recessive trait defined by the absence of one or more of the proteins required for blood clotting. Pattern Baldness In Humans: A Sex Influenced Trait Baldness is an autosomal trait and is apparently influenced by sex hormones after people reach 30 years of age or older. In men the gene is dominant, while in women it is recessive. A man needs only one allele (B) for the baldness trait to be expressed, while a bald woman must be homozygous for the trait (BB). What are the probabilities for the children for a bald man and woman with no history of baldness in the family? Genetic Counseling geneticists that provide parents with the probabilities of passing genetic disorders to their offspring Tools Used for Genetic Counseling Genetic karyotype - picture of an individual’s chromosomes blood testing for enzymes amniocentesis - removal of a small amount of amniotic fluid during pregnancy to analyze cells from fetus and make karyotype fetoscopy – doctor inserts tiny camera through incision in uterus to observe fetal development ultrasound – uses sound waves to observe fetal development chorion villi sampling – doctor takes cell sample of chorion which has same genetic makeup of fetus Pedigrees geneticists interview family members to develop a chart of information through many generations concerning a particular disorder so that it may be analyzed to predict future generations Detecting Genetic Disorders • picture of an individual’s chromosomes – karyotype • amniotic fluid surrounding the embryo is removed for analysis – amniocentesis Female with Down’s syndrome