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Lecture 13 - Integration of Metabolism Chem 454: Regulatory Mechanisms in Biochemistry University of Wisconsin-Eau Claire Introduction Metabolism is not a collection of isolated pathways. 2 Introduction Recurring motifs of regulation Interplay of pathways Three key crossroads glucose 6–phosphate pyruvate acetyl–CoA 3 Introduction Tissue and organ differencs Muscle Liver Brain Adipose tissue Kidneys 4 1. Interconnected Pathways Metabolism consists of highly interconnected pathways 5 1. Interconnected Pathways Catabolism ATP Reducing Power (NADH, NADPH, FADH2) Biosynthetic precursors 6 1. Interconnected Pathways Central Themes ATP is the universal energy currency ATP generated by oxidation of fuel molecules NADPH electron donor in reductive biosynthesis Biosynthetic precursors Biosynthetic and degradative pathways are distinct 7 1.1 Recurring Motifs in Metabolic Regulation Anabolism and catabolism must be precisely regulated: Allosteric interactions Covalent modification 8 1.1 Recurring Motifs in Metabolic Regulation Anabolism and catabolism must be precisely regulated: Enzyme levels Compartmentalization Specialization of organs 9 1.2 Major Control Sites Major metabolic pathways and control sites Glycolysis Phosphofructokinase 10 1.2 Major Control Sites Major metabolic pathways and control sites Citric acid cycle and oxidative phorphorylation Electron donors are oxidized an recycled back to the citric acid cycle only if ADP is simultaneously phosphoryated to ATP. ATP inhibits activity of Isocitrate dehydrogenase α–Ketoglutarate Citric acid cycle also has anabolic role pyruvate carboxylase 11 1.2 Major Control Sites Major metabolic pathways and control sites Pentose phosphate pathway oxidative phase produces NADPH and ribose 5–phosphate non-oxidative phase regenerates glycolytic intermediates 12 1.2 Major Control Sites Major metabolic pathways and control sites Gluconeogenis Glycolysis and gluconeogensis are reciprocally regulated Glycogen synthesis and degradation Hormonally controlled Phosphorylation and allosteric control 13 1.2 Major Control Sites Major metabolic pathways and control sites Fatty acid synthesis and degradation Matrix vs. cytosol 14 1.2 Major Control Sites Major metabolic pathways and control sites Fatty acid synthesis and degradation Matrix vs. cytosol 15 1.3 Key Junctions Key junctions: Glucose 6-phosphate 16 1.3 Key Junctions Key junctions: Pyruvate Acetyl–CoA 17 2. Organ Differences Each organ has a unique metabolic profile Brain Has nearly absolute requirement for glucose Muscle Uses glucose, fatty acids and ketone bodies Liver Provides fuel to the brain and muscles 18 2. Organ Differences Each organ has a unique metabolic profile 19 2. Organ Differences Each organ has a unique metabolic profile Adipose tissue 20