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Topic 14 - Molecular Genetics 1. DNA and chromosomes 2. Protein synthesis 3. Genetic engineering & biotechnology Protein synthesis 14-2 Term Gene Genetic code DNA template Transcription Translation Definition • • • • • • • • • • • • • • • Sequence of nucleotides Part or length of DNA / part of chromosome / on a chromosome A unit of inheritance Codes for a protein or polypeptide or enzyme / controls a characteristic Set of rules Determines how a polypeptide is translated from the information encoded in DNA The non-coding strand Sequence of nucleotides or bases, that Specify the sequence of amino acids that make up a polypeptide The process Genetic information in DNA Transferred onto a mRNA (messenger RNA) The process Genetic information in mRNA Used to synthesise a polypeptide Statements (syllabus): • DNA is used to carry the genetic code, which is used to synthesise specific polypeptides. • Each gene is a sequence of nucleotides, as part of a DNA molecule. 1. The basic unit of inheritance is called gene. 2. A gene is made up of a short length or segment of a DNA molecule. So a DNA molecule may contain thousands of genes along its length. Figure 15-4: Chromosome and Gene 3. One gene contains the genetic code which directs the synthesis of a polypeptide. 4. The type of polypeptide formed is determined by the nucleotide sequence. Each set of three bases forms a codon, which codes for one amino acid. 5. In DNA molecule, there is no fixed order between the nitrogenous bases within a strand. Thus there is a total of 43 ways of arrangement in a codon. 6. Different arrangements of nitrogenous bases eg. AAA and ACA code for different amino acids. 7. The code, which specifies which amino acid each codon codes for, has been figured out and it is known as ‘genetic code’. 8. A sequence of amino acids gives rise to a polypeptide and the folding of this polypeptide produces a functional enzyme or protein. In turn, this enzyme or protein contributes to the “building up” of all the characteristics of the organism. 9. Hence, a gene is responsible for the expression of a specific character. Transcription 10. Since DNA always remains inside the nucleus of the cell while the synthesis of proteins takes place in the cytoplasm, an intermediary is used to “copy” and then carry the information from DNA to the cytoplasm. 11. This intermediary is the messenger ribonucleic acid, or mRNA which is made up of RNA. 12. This process of “copying” is also known as transcription. 13. During transcription, the non-coding strand will be the DNA template where complementary base pairing takes place. 14. Each polynucleotide strand has different names and this depends on which strand is the coding strand. DNA Non-coding Non-sense Strand 1 template strand strand Non-template Sense Coding strand Strand 2 strand strand Coding strand: the DNA strand which has the same base sequence as the mRNA (codons). Non-coding strand: the DNA strand which has the same base sequence as the tRNA (anti-codons). 15. Deoxyribonucleic Acid (DNA) has the word “deoxy” in front because it lacks an oxygen atom compared to Ribonucleic Acid (RNA). 16. Ribonucleic Acid is RNA. RNA copies the DNA message from the nucleus and carries it out to the cytoplasm where the protein molecules are to be synthesized. 17. RNA is similar to DNA but differs structurally in 4 ways shown in the table below. DNA RNA Number of strand(s) 2 1 Structural make-up 1 less oxygen atom; hence the name “deoxyribose” in front Adenine (A) Thymine (T) Cytosine (C) Guanine (G) 1 more oxygen atom; hence the name “ribose” in front Adenine (A) Uracil (U) Cytosine (C) Guanine (G) Nucleotide Bases SmartLab® Education Centre Page 2 of 7 DNA RNA Uracil replaces Thymine Pairing of nucleotide bases A-T C-G A-U C-G Single Strand NH² Cytosine H (C) C Guanine (G) H H Deoxy Ribose C N C C H N H O || C N C O N H NH² Cytosine H (C) C C N C C H Ribose H N C N C N H H Adenine (A) Double Strands Nitrogenous bases N H Guanine O || (G) H N C C N H H H C C N N N H H Adenine NH² || (A) NC NC C N N H C H C C C N C N C H N H N H H Sugar Phosphate Thymine Uracil O O bases (T) (U) H C H C C ³ H H C C N N C C C C H O RNA N H N O DNA Ribonucleic acid Deoxyribonucleic acid H H NH² || C Base Figure 14-3: Comparing RNA and DNA Translation 18. The mRNA leaves the nucleus after the completion of transcription. It then travels to the cytoplasm where protein synthesis occurs. 19. The mRNA is used to give instructions for the construction of protein molecules. 20. Different arrangements of nitrogenous bases eg. AAA and ACA code for different amino acids 21. Different amino acids in a chain would eventually lead to production of different polypeptides or proteins which then give rise to variation in characteristics we see in human. SmartLab® Education Centre Page 3 of 7 22. Although genes get a lot of attention, it is the proteins that perform most life functions and make up the majority of cellular structures. 23. Proteins: • is the more complex form of polypeptides. Poly (many) peptides (smaller segment of a polypeptide). A peptide can be broken down into even smaller subunits known as amino acids as illustrated below. • protect and provide the structure to our body because they form our skin, hair, and muscles. Thus proteins determine your physical traits. • protect our body chemistry because our enzymes (digestive enzymes), hormones and antibodies are all made of proteins. • help in the transportation of oxygen and other important substances in our body. 24. When a gene encodes a protein, the gene is said to be expressed. Our physical traits are a result of the expression of different genes in our cells. Figure 14-1: Protein SmartLab® Education Centre Page 4 of 7 25. (Extra information/ out of syllabus) Synthesis of protein is a result of DNA, RNA and amino acids involving the 2 stages: Transcription and Translation. • There are three types of RNA: messenger RNA (mRNA), transfer RNA (tRNA) and ribosomal RNA (rRNA) • Transcription is a process whereby the genetic information stored in the DNA of a specific gene is “copied” to a strand of newly produced mRNA. In other words, the DNA is to be transcribed. This process takes place in the nucleus of a cell. Transcription takes place in 3 steps: (1) The 2 strands of DNA unwind. (2) RNA nucleotides pair with the DNA nucleotides of one DNA strand. (3) When the information of a whole gene has been “copied” finished, transcription ends. The 2 strands of DNA winds up again while the single strand of mRNA leaves the nucleus for the cytoplasm carrying the genetic sequence for the synthesis of protein. • The diagrams below show the process of transcription. DNA to be transcribed unwinds Transcribed DNA winds up Pairing up of DNA – RNA Nucleotide Bases Transcription ends and mRNA leaves nucleus Figure 14-8: Transcription SmartLab® Education Centre Page 5 of 7 Translation is the process whereby proteins are synthesized or produced. During this process, mRNA works together with the tRNA, ribosomes (contain rRNA) and amino acids in the cytoplasm to produce a specific chain of polypeptides or protein. The diagram below shows the process of translation. • Protein Amino Acid tRNA A strand of mRNA Ribosome contains rRNA Figure 14-9: Translation • To give an illustration of transcription and translation, suppose a specific gene contains the information for having sharp nose. This information is stored in the DNA of the gene. During transcription, the information is copied to mRNA in the nucleus. Then the mRNA leaves the nucleus for the cytoplasm and combines with the tRNA, ribosome and amino acids to produce the specific protein that will give you the trait of having a sharp nose. Now the specific gene is said to be expressed. • A codon is a triplet nucleotide bases that codes for a particular amino acid, and allows the establishment of bonding with a specified tRNA carrying a specified amino acid to be bonded to the polypeptide being developed. http://www.youtube.com/watch?v=41_Ne5mS2ls&feature=related SmartLab® Education Centre Page 6 of 7 • In summary, the flow of genetic information is shown in the diagram below: Nucleus DNA Transcription RNA Translation Cytoplasm Protein Figure 14-10: Protein Synthesis in a Cell SmartLab® Education Centre Page 7 of 7