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Genetics AP Biology 2002 Vocabulary -Allele: alternate form of a gene; symbolized by a letter -Gene: sequence of nucleotides that code for a certain trait -Phenotype: outward expression of a gene -Genotype: the alleles an organism has -Homozygous: 2 of the same alleles; either dominant or recessive -Heterozygous: 2 different alleles Inheritance patterns -Complete dominance: one allele can completely mask another; not always the most common phenotype -Dominant allele can hide another; is symbolized by a capital letter which is chosen for the dominant phenotype -Recessive allele is hidden by the dominant; is symbolized by a lower case letter -TT x TT, TT x Tt, TT x tt, Tt x Tt, Tt x tt, tt x tt Incomplete dominance -Heterozygote shows a blending of the parental traits -CRCW , RR’, RW Co-dominance -Heterozygote shows both parental traits -MN blood type: MM has only M proteins, NN has only N proteins, MN has both M and N proteins; Roan cows, etc Multiple alleles -More than 2 alleles for a given trait’ -ABO blood type -Pheno. Geno. Antigen -A IAIA or IAi A B B -B I or I i B -AB IAIB A, B -O ii none antibodies B A none A,B Mendel -Was a monk in Austria in mid-1800’s, studied math and science -As he was tending peas in the garden, he began to notice patterns in the pea characteristics ( tall or short, white or purple flowers, etc) -Did a series of experiments over a 10 year period of time—mating, growing and counting pea plants with differing characteristics (30,000 pea plants total) and compared them to the previous and next generations -Concluded that some “factor” was passed between generations that could be hidden but not lost Mendel’s Laws -Law of segregation: homologous chromosomes separate and are packaged into different gametes -Law of independent assortment: each pair of homologous chromosomes lines up independently of each other during meiosis 1 Probability rules -Multiplication rule: the probability of independent events are a product of their independent probabilities -Addition rule: to determine the probability of an event that can occur 2 or more different ways you add the individual probabilities Monohybrid crosses -One trait on one chromosome -Pp x Pp; ½ the gametes are P, ½ are p -pp = ½ x ½ = ¼ -PP = ½ x ½ = ¼ -Pp can be done 2 ways: P x p or p x P -¼ + ¼ = ½ Dihybrid crosses -2 traits on 2 separate chromosomes; treat as independent events -Parental cross: PPtt x ppTT -F1: all offspring will be PpTt; mate the F1’s -PpTt x PpTt (same as Pp x Pp and Tt x Tt) What are the phenotype ratios? -Purple, tall P__T__ -Purple short P__tt -White tall ppT_ -White short pptt Trihybrid crosses and beyond -AaBbCcDd x AaBbCcDd -What is the probability of producing offspring that is heterozygous for all the traits? -Desired outcome: AaBbCcDd -Aa x Aa = ½ Aa, Bb x Bb = ½ Bb, Cc x Cc = ½Cc, Dd x Dd = ½ Dd -½ x ½ x ½ x ½ = 1/16 -What is the probability of producing a homozygous recessive offspring? -¼ x ¼ x ¼ x ¼ = 1/256 Epistasis -A gene at one locus alters the phenotypic expression of another gene (stands on it) -Ex: In mice the gene for pigment deposition C is epistatic to the gene for pigment production -CC or Cc—melanin can be deposited; cc—albino -BB or Bb—black; bb—brown -Genes are on separate chromosomes and assort independently Polygenic inheritance -Traits are determined by many loci so there is a range of phenotypes -ex: skin pigmentation in humans is controlled by 3 genes—A, B, C—which show incomplete dominance; the more capital letters, the darker the skin color (the more melanin is produced) Sex Chromosomes -Humans have 23 pairs of chromosomes: 22 pairs of autosomes and 1 pair of sex chromosomes -Females are XX, males are XY (X and Y look different from each other); females give all their eggs one X chromosome plus cytoplasm and organelles; Sex determination -Males determine the sex of the child since ½ of their sperm get the X and ½ get the Y -Any information on the X chromosome will appear in males, whether recessive or dominant; females require 2 recessive alleles to show a recessive trait -Information solely on the Y chromosome are called holandric genes (porcupine quill body hair, hairy ear rims, SRY gene); only effect men Barr Bodies -In body cells of females one X chromosome at random is turned off early in development; inactivated X is called a Barr body -All the cells descended from that cell have the same X turned off -If female is heterozygous she becomes a mosaic—some areas have the dominant gene expressed, some have the recessive -Ex: calico cats, patches of colorblindness Non-disjunction -Failure of chromosome pairs to separate during meiosis -Results in gametes with too many or too few chromosomes -Aneuploidy: abnormal # of a certain chromosome -Polyploidy: more than 2 complete chromosome sets -An embryo needs at least one X chromosome to survive Sex linkage problems -It is now important if the offspring is male or female so the X and Y have to be used along with superscripts to show the alleles -Examples of X-linked disorders: colorblindness, hemophilia, muscular dystrophy, eye color in fruit flies Hemophilia -H-normal, h-hemophiliac -Phenotype -Normal female -Carrier female -Hemophiliac female -Normal male -Hemophiliac male Genotype XHXH XHXh XhXh XHY XhY Crossing over -The degree of crossing over of any 2 loci is proportional to the distance between them. -In complete linkage only the parental type gametes are produced -In gametes produced by crossing over, two new combinations appear (the result of nonsister chromatids exchanging segments) along with the parental types -The closer the loci are to each other the less recombinants are formed. Example -Yellow, white, and miniature mutations in fruit flies -Data--crossing over observed: -Yellow, white = .5% -White, miniature = 34.5% -Yellow, miniature = 35.4% -What is the order of the genes? -Yellow and white must be relatively close because of the low recombination frequency. -Miniature must be far apart from both yellow and white because the recombination frequency is high. -Because frequency of miniature and yellow is greater that miniature and white, white must be between them -Order is yellow—white—miniature