Download Nedchromosnotes2jan2014NED 20 KB

Survey
yes no Was this document useful for you?
   Thank you for your participation!

* Your assessment is very important for improving the workof artificial intelligence, which forms the content of this project

Document related concepts

Metagenomics wikipedia , lookup

Genetic engineering wikipedia , lookup

Copy-number variation wikipedia , lookup

Biology and consumer behaviour wikipedia , lookup

No-SCAR (Scarless Cas9 Assisted Recombineering) Genome Editing wikipedia , lookup

Transposable element wikipedia , lookup

Gene expression profiling wikipedia , lookup

Oncogenomics wikipedia , lookup

Ridge (biology) wikipedia , lookup

Extrachromosomal DNA wikipedia , lookup

Whole genome sequencing wikipedia , lookup

Segmental Duplication on the Human Y Chromosome wikipedia , lookup

Mitochondrial DNA wikipedia , lookup

Public health genomics wikipedia , lookup

Hybrid (biology) wikipedia , lookup

Non-coding DNA wikipedia , lookup

Gene expression programming wikipedia , lookup

Gene wikipedia , lookup

Skewed X-inactivation wikipedia , lookup

Polycomb Group Proteins and Cancer wikipedia , lookup

Genomics wikipedia , lookup

Epigenetics of human development wikipedia , lookup

Site-specific recombinase technology wikipedia , lookup

Pathogenomics wikipedia , lookup

Human genome wikipedia , lookup

Artificial gene synthesis wikipedia , lookup

Genomic library wikipedia , lookup

Genome editing wikipedia , lookup

Human Genome Project wikipedia , lookup

History of genetic engineering wikipedia , lookup

Minimal genome wikipedia , lookup

Designer baby wikipedia , lookup

Genomic imprinting wikipedia , lookup

Meiosis wikipedia , lookup

Microevolution wikipedia , lookup

Y chromosome wikipedia , lookup

Genome (book) wikipedia , lookup

X-inactivation wikipedia , lookup

Genome evolution wikipedia , lookup

Neocentromere wikipedia , lookup

Chromosome wikipedia , lookup

Karyotype wikipedia , lookup

Ploidy wikipedia , lookup

Polyploid wikipedia , lookup

Transcript
1
of 2
Genetics Res: on Chromosomes: NOTES 2 Jan 6, 2014
Dr. Nedwidek
Stuyvesant HS
Aim: How are genes and chromosomes structured in Eukaryotes?
Human genes have some very different and important structural features. Draw the key features
of a human (mammalian eukaryotic) gene (based on Thompson genetics, page 20) and a bacterial
gene (based on Griffiths 354 and your class notes) in your notebooks. *1 drawing
Use Ch 16 Griff to review chromosome structure. Know major differences between prokaryotic
and eukaryotic chromosome organization. Know that prokaryotic genomic DNAs are circular
with no nucleus and no protein scaffolding present. Eukaryotic genomes are larger, more
complex, and more organized. Know that Downs (47), Turners (45), and Klinefelters (47) have
in common that they are all caused by nondisjunction (NDJ) events; the numbers next to each
condition refer to what?
Important terms you need to and should know but I do not have time to redefine because they
should be hardwired by now are haploid, diploid, nucleosome, chromatin, histone, centromere,
telomere, homologues, chromatids.
Bacterial genomes = 4.6 Mb = 4.6 x 10^6 bp
Human genome = 3.1 x 10^9 bp
Genome sizes  Griff 454/ bacterial stats on 760
Human Genome project: Initial guess was 100,000 genes. Actual was found to be less than
30,000 genes (close to 25,000 genes). Mutations at the level of chromosomes can cause genetic
disease, so knowing how they are put together is important.
Turners, downs and Klinefelter’s all result from aberrations in chromosome number. Draw the
anatomy of a chromosome post-replication from the board. *2 drawing
During mitosis and meiosis, copying and division accomplish recruitment and safe redistribution
of the genome. Mitosis forms two identical somatic cells. Meiosis does not generate identical
outcomes; it accomplishes shuffling and distribution of genomes to the germline.
Outline the key events of meiosis with a crossover event. *3 drawing
General ploidy relationships in NDJ: It is unlikely that one defective haploid complement would
make up for another, but these events happen in pairs. For 2n=4 (dip), n=2 (hap)
Complementary, connected
Norm
norm
Male, sperm hap
n
n
Norm
norm
Female, egg hap
n
n
Diploid
2n
2n
Total Chromosomes 4
4
complementary, connected events
abnorm
abnorm
n+1
n-1
norm
norm
n
n
2n+1
2n-1
5
3
2
of 2
Meiotic nondisjunction event outcomes in humans
Klinefelters: XX egg + Y sperm most likely
Downs: (#21, #21) egg + (#21) sperm or the converse
Turners: (No X) egg + (X) sperm or converse (X) egg + (no X) sperm
Supermale: (X) egg + (YY) sperm only
Aim: How do we describe all the things that can go wrong with whole chromosomes?
Terms to know:
Euploidy: Plants: certain chromosome set (complete) but X-fold: triploid (3), tetraploid (4),
pentaploid (5), hexaploid (6). Refers to whole genome.
Monoploidy: not sex cells; insects and plants; not haploid (n).
Polyploidy: prevalent and normal in plants because of tissue specialization (ex is triploid
endosperm in fruits)
Autopolyploidy (plants): polyploidy from doubling of one genome of species (whole organism)
Allopolyploidy: chromosome sets from two different species unite and double (ex: mule).
Endopolyploidy: polyploidy in certain cells only: examples, vertebrate liver and insect gut.
Polyteny: in insects. Multicopies of DNA within a haploid chromosome set.
Aneuploidy: difference from normal in small number of chromosomes within the set.
Nondisjunction event is responsible. Aneuploids can be:
Post-fert, abnormal diplod variations: trisomic (2n+1)
Monosomic (2n-1)
Nullisomic (2n-2)
Pre-fert, abnormal haploid variations: disomic (n+1)
Examples of disorders that are due to aneuploidy are
turners (monosomy);
Klinefelters (XXY), downs (+21), XYY, XXX, Edwards (+18), Patau (+13)- (all trisomies)
**Aneuploidy is always bad in humans.
Ploidy affects gene balance, which affects dosage, or the number of available, expressed DNA
templates.
Dosage compensation in humans: the X chromosome is altered or suppressed in females.
Defects in ploidy affect dosage (ex turners females).
Next…Phenotypes for chromosome damage…look at griff 572.