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B13.6 Teacher practical Make your own protein Specification references 6.1.5 DNA structure WS 1.2 Learning outcomes After completing this worksheet, students should be able to: show how a protein is produced inside the cell show how a mutation can affect the function of a protein. Aims The aim of this activity is to provide a kinaesthetic experience to help students visualise a complex process. Teacher notes 1 2 3 4 5 6 Provide students with a worksheet that explains how to build proteins using a DNA template. You will need to provide the DNA template and table to read the codons. One is supplied in the example data below, but could be customised to suit your equipment. You could introduce complexity by having a sense strand and non-sense strand, and explaining that the cell reads one strand. You could also introduce a stop codon. The students then build a protein. Discuss the concept of mutations if they have not yet been mentioned. The students then use a second strand of DNA with a single mutation, which substitutes one coloured bead for another. The students will then be unable to bend and fold the protein, thus illustrating the change in shape affecting the structure (and function) of the protein. Example data DNA strand T T A G T A A A T T C C © Oxford University Press 2016 G T T G A T G T T T A A T G T T A C G T A T C A www.oxfordsecondary.co.uk/acknowledgements This resource sheet may have been changed from the original. 1 B13.6 Teacher practical Table showing codons to possible bead colour. Codon Possible bead colour Bonding information TGT Blue Bonds with ATG (pink) TTA Green CGT Purple ATG Pink GTA Red ATC Yellow Bonds with TGT (blue) Mutated DNA strand T T A A T C G T A G T A A C G T A A T C T G T T T A T C T T A C G T A T Answers 1 2 3 Three Minimum number is 156 The sequence of bases in the DNA determines the sequence of the amino acids. (1 mark) (1 mark) (1 mark) Student follow-up 4 5 6 A mutation is a change in the base sequence of DNA. a The mutation can change an amino acid in the protein chain. This can affect the bending and folding of the protein, changing its shape. b The function of the protein depends on its shape, for example, the active site shape in an enzyme. If you change the shape, you change the function. Some mutations do not affect the function of a protein because not all of the amino acids will be involved in the bending and folding (or they do not affect it). This will then have less impact on the shape, so the function is not affected. (1 mark) (2 marks) (2 marks) (2 marks) Additional support Suggest that students draw lines between each codon before they start. © Oxford University Press 2016 www.oxfordsecondary.co.uk/acknowledgements This resource sheet may have been changed from the original. 2 B13.6 Teacher practical Technician notes Equipment Coloured beads (at least six different colours) String Diagram of a strand of DNA with around 36 base pairs Table that shows the colours of the bead coded for by different codons. © Oxford University Press 2016 www.oxfordsecondary.co.uk/acknowledgements This resource sheet may have been changed from the original. 3