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beyond Mendel - the chromosomal basis of inheritance biology 1 • Mendel’s Laws based on chromosomal behavior • Specific advances in the knowledge of genetics – Sex-linkage – Recombination – Linked genes – Sex-linked disorders – Alterations of chromosome number/structure A chromosome basis for Mendel • Observed by late 1900s; – Chromosomes and genes are both paired in diploid cells – Homologous chromosomes separate and allele pairs segregate during meiosis – Fertilization restores the paired condition for both chromosomes and genes • This led to the chromosome theory of inheritance – Mendelian factors or genes are located in chromosomes – It is the chromosomes that segregate and independently assort • Thomas Morgan substantiated this theory with work on fruit flies, Drosophila (2n = 8) • Adopted a new method of symbolizing genes and alleles – A gene’s symbol is based on the first mutant, non-wild type discovered (e.g. w = white eye allele in Drosophila) – If the mutant is dominant, the first letter is capitalized (e.g. Cy = curly wings in Drosophila) – Wild type (normal) gets superscript + (e.g. Cy+ is the allele for normal, straight wings) Sex-linkage • Morgan crossed a white-eyed male (w) with a red-eyed female (w+w+) – In the F1, all progeny had red eyes, implying that red-eye was dominant – In the F2, white-eye trait was only found in males - females were always red-eye • Deduction: the gene for eye color is on the X chromosome, since – If eye color is located only on the x-chromosome, then females carry to copies of the gene (XX), while males (XY) only carry one – Since the mutant allele is recessive, wa white eyed female must have that allele on both X chromosomes, which would be impossible for F2 females – A white-eyed male has no wild type to mask the recessive mutant allele, so a single copy of the mutant allele confers white eyes Linked genes • Linked genes are located in the same chromosome and tend to be inherited together (ie, do not sort independently, 9:3:3:1 ratio is not preserved) – For example, in a non-linked dihybrid testcross, e.g. YyRr x yyrr Yellow round F1 YyRr Yellow round 1 yyrr green wrinkled : 1 : (Parental types) Green wrinkled yyRr green round 1 Yyrr yellow wrinkled : 1 (Recombinant types) • If genes are totally linked, some possible phenotypes should not appear (although sometimes they can, if linakge is not complete) • For example, Morgan crossed black body (b), normal wings (vg+) vs. wild type body (b+), vestigial wings (vg) Phenotypes Body/wing genotypes results if unlinked results if linked actual results Black, normal bb vg+ vg 575 - 206 Gray, normal Black, vestigial b+b vg+vg bb vgvg 575 575 1150 1150 965 944 Gray, vestigial b+b vgvg 575 - 185 Recombination frequency = 391 recomb./2300 offspring = 17% • Conclusion: the two genes are neither completely linked or unlinked • If genes are completely linked, then expect only parental types in offspring • Crossing over in Prophase I accounts for recombination of linked genes • Genes that are located in the same chromosome close to each other are less likely to separate during synapsis. Genes that are further apart are more likely to be separated • If crossing-over occurs randomly, percentage of crossing-over can be used to map location of genes on a chromosome Loci Recombination frequency Approximate Map Units (centimorgans) b vg 17.0% 18.5 (9 + 9.5 = 17) cn b 9.0% 9.0 cn vg 9.5% 9.5 17 9.0 b 9.5 cn vg • When linked genes are further apart than 50 cM, they are indistinguishable to non-linked genes • Cytological mapping can now pinpoint precise location on chromosome Sex-linked disorders • Since the x-chromosome is larger, there are more x-linked traits: most have no homologous loci on the y-chromosome • Most genes on the y-chromosome have no x-counterparts, and encode traits only found in males • Examples of sex-linked traits include color blindness and hemophilia. – Fathers pass X-linked alleles to only, and all of their daughters. Fathers cannot pass x-sex-linked traits to sons – Mothers can pass X-linked alleles to both sons and daughters – X-sex-linked traits are rarer in females since they tend to be recessive, and thus require a homozygous condition – Any male that receives an X-sex-linked chromosome, recessive or not, will express it, since they are hemizygous – As a consequence, males tend to display more sex-linked disorders. X-inactivation • To prevent females from receiving a double-dose of sex-linked traits, one X-chromosome is typically inactivated, contracting into a dense object called a barr body • Barr bodies are reactivated in gonadal cells for meiosis • Choice of which X to inactivate (maternal or paternal inherited) is randomly selected in embryonic cells • Thus heterozygous females display sex-linked traits on a 50/50 basis (e.g., calico cats) • Formation of barr body appears to be by methylation of cytosine Alteration of chromosome number • Meiotic nondisjunction: a homologous pair does not separate in Metaphase I, or chromatids do not separate in Metaphase II • Mitotic nondisjunction: occurs at metaphase. If early in embryonic development, can be passed onto a large number of cells • Aneuploidy - an abnormal number of chromosomes (trisomic or monosomic); for example, Down syndrome is trisomy of chromosome 21 • Polyploidy - a chromosome number that is more than two complete chromosome sets; this is very common in plants Alteration of chromosome structure • Fragments breaking off from chromosomes may result in deletions • Addition of those fragments to: – Homologous chromosomes causes a replication – Nonhomologous chromosomes causes a translocation – Original chromosome in reverse order causes an inversion • Crossovers are usually reciprocal, but sometimes a chromatid gives up more genes than it receives in an unequal crossover (creates one deletion and one duplication) Human disorders resulting from chromosomal alteration • Down syndrome effects 1/700. The result of trisomy on chromosome 21 (an autosome), causes specific facial features, heart defects, retardation, and proneness to leukemia • Sex chromosome aneuploidies are typically less severe because – The Y chromosome carries less genes – Copies of the X-chromosome may be inactivated as barr bodies