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Department of Chemistry and Biochemistry University of Lethbridge Biochemistry 3020 1. All of the following enzymes involved in the flow of carbon from glucose to lactate (glycolysis) are also involved in the reversal of this flow (gluconeogenesis) except: A) 3-phosphoglycerate kinase. B) aldolase. C) enolase. D) phosphofructokinase-1. E) phosphoglucoisomerase (2 Marks) D 1 2. Glycogen is converted to monosaccharide units by: A) glucokinase. B) glucose-6-phosphatase C) glycogen phosphorylase. D) glycogen synthase. E) glycogenase (2 Marks) C Glycogen and Starch Are Degraded by Phosphorolysis Glycogen phosphorylase / Starch phosphorylase -attack of Pi on the (α1→4) glycosidic linkage of the last the two glucose residues. Phosphorolysis generates Glucose 1-phosphat 2 3. Which of the below is not required for the oxidative decarboxylation of pyruvate to form acetyl-CoA? A) ATP B) CoA-SH C) FAD D) Lipoic acid E) NAD+ (2 Marks) A Structure and Mechanism Oxidative decarboxylierung of pyruvate to acetyl-CoA. Step 1 is rate limiting and responsible for substrate specificity. 3 4. Explain why the phosphorolysis of glycogen is more efficient than the hydrolysis of glycogen in mobilizing glucose for the glycolytic pathway. (4 Marks) Phosphorolysis yields glucose 1-phosphate, which can be converted into glucose 6-phosphate without the investment of energy from ATP. Hydrolysis of glycogen yields free glucose, which must be converted into glucose 6-phosphate (at the expense of ATP) before it can enter glycolysis. 5. Yeast can metabolize D-mannose to ethanol and CO2. In addition to the glycolytic enzymes, the only other enzyme needed is phosphomannose isomerase, which converts mannose 6-phosphate to fructose 6-phosphate. If mannose is converted to ethanol and CO2 by the most direct pathway, which of the compounds and cofactors in this list are involved? A. Lactate B. Acetaldehyde C. Acetyl-CoA D. FAD E. Glucose 6-phosphate F. Fructose 1-phosphate G. Pyruvate H. Lipoic acid I. Thiamine pyrophosphate J. Dihydroxyacetone phosphate (4 Marks) B, G, I, J 4 6. The main function of the pentose phosphate pathway is to: A) give the cell an alternative pathway should glycolysis fail. B) provide a mechanism for the utilization of the carbon skeletons of excess amino acids. C) supply energy. D) supply NADH. E) supply pentoses and NADPH. (2 Marks) E Pentose Phosphate Pathway Alternative path to oxidize Glucose. The electron acceptor is NADP+. NADPH is needed for reductive biosynthesis. Products are pentose phosphates. High amounts of NADPH prevent oxidative damage to proteins (red blood cells, cornea). 5 7. Inorganic fluoride inhibits enolase. In an anaerobic system that is metabolizing glucose as a substrate, which of the following compounds would you expect to increase in concentration following the addition of fluoride? A) 2-phosphoglycerate B) Glucose C) Glyoxylate D) Phosphoenolpyruvate E) Pyruvate (2 Marks) A 8. Draw the structure of 1,3-bisphosphoglycerate. Indicate with an arrow the phosphate ester, and circle the phosphate group for which the free energy of hydrolysis is very high. (4 Marks) 6 9. Cellular isozymes of pyruvate kinase are allosterically inhibited by: A) high concentrations of AMP. B) high concentrations of ATP. C) high concentrations of citrate. D) low concentrations of acetyl-CoA. E) low concentrations of ATP (2 Marks) B Gluconeogenesis Reactions Conversion of pyruvate to PEP is complex. Oxaloacetate is a citric-acid cycle metabolite → occurs in mitochondria Pyruvate must be transported into the mitochondrion to enter gluconeogenesis 7 10. Briefly describe the relationship of the pyruvate dehydrogenase complex reaction to glycolysis and the citric acid cycle. (4 Marks) The pyruvate dehydrogenase complex converts pyruvate, the product of glycolysis, into acetyl-CoA, the starting material for the citric acid cycle. 11. As part of the catalytic mechanism of phosphogluco mutase a conserved amino acid residue is covalently modified. A similar mechanism is used by another mutase during glycolysis. List the enzymes, modifications, and amino acid residues. (5 Marks) -Phosphogluco mutase, Phosphorylation, Ser -Phosphoglycerat mutase, Phosphorylation, His 8 Reaction Mechanism of PGM Phosphoglucomutase mechanism Glucose 1-phosphate has to be converted into Glucose 6-phosphate in order to enter glcolysis 9 10