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IB Biology II – Botany Data Practice #1 1. Name: _______________________________ The unicellular green alga Phaeodactylum tricornutum is photosynthetic. Cell biologists genetically modified this organism by adding a glucose transporter gene. The modified and unmodified algae were grown in a nutrient medium under a series of different conditions and the growth rate of the cells was measured. 12 10 Unmodified algae Key: = light and no glucose in the medium Modified algae 8 Cell density / 10 7 cells cm –3 6 = light and glucose in the medium 4 = dark and glucose in the medium 2 0 0 (a) 2 4 6 8 0 2 Time / days 4 6 8 State the role of glucose in the metabolism of cells. ..................................................................................................................................... (1) (b) Deduce where you would expect to find the glucose transporter protein in the modified algae cells. ..................................................................................................................................... ..................................................................................................................................... (2) (c) Compare the effect of light on the modified and the unmodified cells. ..................................................................................................................................... ..................................................................................................................................... (2) Commercially, unmodified algae are grown in shallow sunlit ponds or illuminated containers. The cells only grow in the top few centimetres. However, the modified algae can grow at any depth. (d) Explain why the modified algae can grow at any depth whereas the unmodified algae can only grow at the surface. ..................................................................................................................................... ..................................................................................................................................... ..................................................................................................................................... ..................................................................................................................................... ..................................................................................................................................... (3) 1 2. A study was carried out to determine the relationship between the diameter of a molecule and its movement through a membrane. The graph below shows the results of the study. High Relative ability to move through a membrane Low 0 0.4 0.8 1.2 1.6 Molecular diameter / nm (a) From the information in the graph alone, describe the relationship between the diameter of a molecule and its movement through a membrane. ..................................................................................................................................... ..................................................................................................................................... (2) A second study was carried out to investigate the effect of passive protein channels on the movement of glucose into cells. The graph below shows the rate of uptake of glucose into erythrocytes by simple diffusion and facilitated diffusion. Rate of glucose uptake / mmol cm –3 cells hr –1 500 450 400 350 300 250 200 150 100 50 0 facilitated diffusion simple diffusion 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 External concentration of glucose / mmol dm –3 (b) Identify the rate of glucose uptake at an external glucose concentration of 4 mmol dm–3 by (i) simple diffusion; ......................................... (1) (ii) facilitated diffusion. ......................................... (1) 2 (c) (i) Compare the effect of increasing the external glucose concentration on glucose uptake by facilitated diffusion and by simple diffusion. ........................................................................................................................... ........................................................................................................................... ........................................................................................................................... ........................................................................................................................... ........................................................................................................................... ........................................................................................................................... (3) (ii) Predict, with a reason, the effect on glucose uptake by facilitated diffusion of increasing the external concentration of glucose to 30 mmol dm–3. ........................................................................................................................... ........................................................................................................................... ........................................................................................................................... ........................................................................................................................... (2) (Total 9 marks) 3 IB Biology II –Botany Data Practice #2 The Kluane boreal forest ecosystem project was a large scale ten year experimental manipulation of food and predators on arctic ground squirrel population (Spermophilus parryii plesius). Three areas were set up: a food addition area a predator exclusion area a food addition area enclosed within a predator exclusion area. The areas were monitored from 1986 to 1996. In spring 1996 all fences were dismantled and food addition was stopped. As a further experiment, spring and summer mark-recapture population estimates of the squirrels were conducted from spring 1996 to spring 1998. The results for these two years are shown below. The areas are labelled according to the conditions imposed during the previous ten years. 30 25 20 15 10 Squirrels hectare –1 1. Name: _________________________________ Control Predator exclusion Food addition Food addition plus predator exclusion 5 0 Spring 1996 (a) Summer 1996 Spring 1997 Summer 1997 Spring 1998 State the squirrel population in the food addition plus predator exclusion area in spring 1996. ..................................................................................................................................... (1) (b) Describe the effect of ending food addition on the squirrel population. ..................................................................................................................................... ..................................................................................................................................... (2) (c) Scientists believed that the number of ground squirrels in the boreal forests was limited by an interaction between food and predators that acted primarily through changes in reproduction. Using the data, discuss this hypothesis. ..................................................................................................................................... ..................................................................................................................................... ..................................................................................................................................... ..................................................................................................................................... (3) 4 Research into how the lungs perform during general anesthetics has increased because there are so many pulmonary complications during operations. It is believed that many inhaled anesthetics affect pulmonary epithelial permeability. Pulmonary clearing is an indication of whether the alveolar-capillary barrier has been damaged. It can be measured as the rate at which radioactivity decreases in lungs after inhalation of a radioactive aerosol. The greater the clearing rate, the greater the damage to the alveolar-capillary barrier. Smoking and lung diseases (such as cancers and asthma) also significantly increase the clearing rate of radioactive aerosols. In an experiment, doctors wanted to test the effect of inhaled anesthetics on the permeability between the alveoli and capillaries. Patients were tested by inhaling a radioactive aerosol one day before their operation and one hour after their operation. Three groups of patients each received a different type of anesthetic. Group 1 :1% halotane inhaled anesthetics Group 2 :1.5% isoflurane Group 3: intravenous anesthetic (phentanyl and propofol) Deviation Mean 2.0 Clearing rate / % min –1 2.0 1.5 1.0 0.5 0.0 before anesthetic after anesthetic Group 1 (a) 2.0 Clearing rate / % min –1 Key: Clearing rate / % min –1 2. 1.5 1.0 0.5 0.0 before anesthetic after anesthetic 1.5 1.0 0.5 0.0 before anesthetic Group 2 after anesthetic Group 3 Compare the effect of each inhaled anesthetic on the permeability of the alveoli. ..................................................................................................................................... ..................................................................................................................................... (2) (b) Using the data from the graphs, explain whether or not inhaled anesthetics are more dangerous than intravenous anesthetics. ..................................................................................................................................... ..................................................................................................................................... ..................................................................................................................................... (3) (c) Suggest one reason why asthmatic patients were not used in this experiment. .................................................................................................................................... (1) 5 IB Biology II –Botany Data Practice #3 1. Name: _________________________________ It had always been assumed that eukaryotic genes were similar in organization to prokaryotic genes. However, modern techniques of molecular analysis indicated that there are additional DNA sequences that lie within the coding region of genes. Exons are the DNA sequences that code for proteins while introns are the intervening sequences that have to be removed. The graph shows the number of exons found in genes for three different groups of eukaryotes. Percentage of genes 100 80 Saccharomyces cerevisiae (a yeast) 60 40 20 0 40 30 Drosophila melanogaster (fruit fly) 20 10 0 20 15 Mammals 10 5 0 (a) 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 <30<40<60>60 Number of exons Calculate the percentage of genes that have five or less exons in mammals. ..................................................................................................................................... (1) (b) Describe the distribution of the number of exons and the percentage of genes in D. melanogaster. ..................................................................................................................................... ..................................................................................................................................... (2) (c) (i) Compare the distributions of the number of exons found in genes of S. cerevisiae and mammals. ........................................................................................................................... (2) 6 (ii) Suggest one reason for the differences in the numbers of exons found in genes of S. cerevisiae and mammals. ........................................................................................................................... (1) Human DNA has been analysed and details of certain genes are shown in the table below. Gene Insulin Gene size / kb* mRNA size / kb Number of introns 1.7 0.4 2 Collagen 38.0 5.0 50 Albumin 25.0 2.1 14 Phenylalanine hydroxylase 90.0 2.4 12 2 000.0 17.0 50 Dystrophin *kilobase pairs (d) Calculate the average size of the introns for the albumin gene. ..................................................................................................................................... ..................................................................................................................................... (2) (e) Analyse the relationship between gene size and the number of introns. ..................................................................................................................................... ..................................................................................................................................... (2) (f) Determine the maximum number of amino acids that could be produced by translating the phenylalanine hydroxylase mRNA. ..................................................................................................................................... (1) Hemoglobin is a protein composed of two pairs of globin molecules. During the process of development from conception to adulthood, human hemoglobin changes in composition. Adult hemoglobin consists of two alpha- and two beta-globin molecules. Two globin genes occur on chromosome 16: alpha- and zeta-globin. Four other globin genes are found on chromosome 11: beta, delta, epsilon and gamma. The graph below illustrates the changes in expression of the globin genes over time. 7 50 Key: alpha-globin gamma-globin beta-globin delta-globin epsilon-globin zeta-globin 40 Percentage of hemoglobin 30 20 10 0 (g) 10 20 30 weeks of gestation 40 birth 2 6 4 month of age State which globin genes are the first to be expressed after fertilization. ..................................................................................................................................... (1) (h) Compare the expression of the gamma-globin gene with the beta-globin gene. ..................................................................................................................................... ..................................................................................................................................... ..................................................................................................................................... ..................................................................................................................................... (3) (i) Deduce the composition of the hemoglobin molecules at 10 weeks of gestation; ......................................................................................... .......................................................................................... 2 months after birth. .......................................................................................... .......................................................................................... (2) 8 IB Biology II –Botany Data Practice #4 The mold Penicillium expansum causes serious crop loss of apples and pears during storage and packing. The graphs below show the density of P. expansum spores on normal skin, damaged skin and lenticels (small air pores allowing gaseous exchange) of apples. The experiments show the results at two humidity levels over a four day period. High humidity Low humidity 1000 Log10spores / cm2 1000 Log10spores / cm2 1. Name: _________________________________ 100 10 1 4 12 24 48 96 Time / h (a) 10 1 0 Key: 100 0 4 12 24 48 96 Time / h density of spore on normal skin density of spore on damaged skin density of spore on lenticels State the time taken for spores on the skin to reach a density of 100 spores/cm2 at high humidity. ...................................................................................................................................... (1) (b) Compare the density of spores on normal skin with spores on lenticels for apples stored at high humidity. ...................................................................................................................................... ...................................................................................................................................... (2) (c) Discuss whether apples should be stored at high humidity or low humidity. ...................................................................................................................................... 9 ...................................................................................................................................... ...................................................................................................................................... (3) 2. Biosphere 2, an enormous greenhouse built in the Arizona desert in the USA, has been used to study five different ecosystems. It is a closed system so measurements can be made under controlled conditions. The effects of different factors, including changes in carbon dioxide concentration in the greenhouse, were studied. The data shown below were collected over the course of one day in January 1996. 1200 1600 1400 1000 1200 CO 2 / 800 ppm light / 1000 mol m–2 s –1 600 800 600 400 400 Key: 200 0 (a) (i) CO 2 Light 200 0 0 1.5 3 4.5 6 7.5 9 10.5 12 13.5 15 16.5 18 19.5 21 22.5 24 Time / hours Identify the time of day when the sun rose. ........................................................................................................................... (1) (ii) Identify the time of minimal CO2 concentration. ........................................................................................................................... (1) (b) Determine the maximum difference in the concentration of CO2 over the 24-hour period. ..................................................................................................................................... (1) (c) Suggest reasons for changes in CO2 concentration during the 24-hour period. ..................................................................................................................................... ..................................................................................................................................... ..................................................................................................................................... ..................................................................................................................................... ..................................................................................................................................... (2) 10 IB Biology II –Botany Data Practice #5 1. Name: _________________________________ Studies have been carried out on the consumption of oxygen by mammals under different conditions. The graph below shows the oxygen consumption of a pigmy possum (Cercaertus nanus) at various air temperatures. 5 4 Oxygen consumption / ml O 2 g - 1 h - 1 3 2 1 0 0 (a) 5 10 15 20 25 Air temperature / C 30 35 40 Estimate the oxygen consumption at 20C. .................................................................................................................................... (1) (b) Outline the effect of temperature on oxygen consumption. .................................................................................................................................... .................................................................................................................................... (2) (c) An air temperature of 32C is the lower critical temperature for a pigmy possum. Deduce the meaning of lower critical temperature. .................................................................................................................................... (1) The graph below shows the metabolic rates of various mammals in relation to air temperatures. Metabolic rate refers to the rate of use of energy by an animal and may be measured indirectly by oxygen consumption. The basal metabolic rate (BMR) for each animal, in the absence of stress, is given the value of 100. This occurs at different temperatures for different animals. The changes in metabolic rate as the temperature falls are expressed as a percentage of the BMR for each animal. 11 (d) (i) Identify the mammal with the greatest increase in metabolic rate per degree of temperature, as the temperature decreases. .......................................................................................................................... (1) (ii) Calculate the average change in the metabolic rate, per degree of temperature, of a weasel as the temperature decreases from 17C to –20C. Show your workings. .......................................................................................................................... .......................................................................................................................... (2) (e) Suggest one reason for the increase in metabolic rate of mammals at lower temperatures. .................................................................................................................................... (1) (f) Discuss the differences between tropical and arctic mammals regarding the changes in their metabolic rates as the temperature decreases. .................................................................................................................................... .................................................................................................................................... .................................................................................................................................... .................................................................................................................................... .................................................................................................................................... (3) Other studies were carried out to see the relationship of the thickness of fur in mammals to its value as an insulator. A good insulator prevents heat loss from the animals to their environment. The graph below shows the relationship of the fur thickness to fur insulation in different mammals. Symbols represent the transfer of heat from fur to air or fur to ice water. 12 4.0 3.5 white fox 3.0 reindeer 2.5 rabbit Fur insulation value / W dm–2 2.0 dall sheep wolf grizzly bear polar bear red fox dog beaver 1.5 seal lemming squirrel 1.0 seal in ice water weasel 0.5 shrew beaver in ice water polar bear in ice water 0.0 0 10 20 30 40 50 60 70 80 Fur thickness / mm Key : ♦ = the rate of transfer of heat from fur to air ◊ = the rate of transfer of heat from fur to ice water (g) (i) Calculate the difference in fur thickness between a reindeer and a grizzly bear. .......................................................................................................................... (1) (ii) Suggest a reason for their similar fur insulation value. .......................................................................................................................... (1) (h) (i) Calculate the change in the insulation value for a beaver when it enters ice water. .......................................................................................................................... (1) (ii) Suggest an adaptation that allows a mammal to maintain its body temperature while in ice water. .......................................................................................................................... (1) (i) Discuss the relationship between metabolic rate and fur thickness in mammals. .................................................................................................................................... .................................................................................................................................... .................................................................................................................................... (3) 13