Survey
* Your assessment is very important for improving the work of artificial intelligence, which forms the content of this project
Download {PDOC00000} {BEGIN
Document related concepts
Structural alignment wikipedia , lookup
Protein design wikipedia , lookup
Circular dichroism wikipedia , lookup
Protein folding wikipedia , lookup
Bimolecular fluorescence complementation wikipedia , lookup
Alpha helix wikipedia , lookup
G protein–coupled receptor wikipedia , lookup
Trimeric autotransporter adhesin wikipedia , lookup
Protein purification wikipedia , lookup
Nuclear magnetic resonance spectroscopy of proteins wikipedia , lookup
Homology modeling wikipedia , lookup
List of types of proteins wikipedia , lookup
Protein structure prediction wikipedia , lookup
Protein moonlighting wikipedia , lookup
Protein mass spectrometry wikipedia , lookup
Intrinsically disordered proteins wikipedia , lookup
Protein domain wikipedia , lookup
Transcript
selected two conserved regions. One is located in the central section
and the
other in the C-terminal section.
-Consensus pattern: A-x(7)-[LIVM]-x(3)-W-x(2)-G-x-[LIVMF]-T-N
-Sequences known to belong to this class detected by the pattern: ALL.
-Other sequence(s) detected in SWISS-PROT: a human dnaJ protein homolog.
-Consensus pattern: [DN]-x(7)-[LIVMFY]-x-[LIVM]-P-x-N-D-D-[STA]-x(3)[LIVM]
-Sequences known to belong to this class detected by the pattern: ALL.
-Other sequence(s) detected in SWISS-PROT: NONE.
-Last update: June 1994 / First entry.
[ 1] Davis S.C., Tzagoloff A., Ellis S.R.
J. Biol. Chem. 267:5508-5514(1992).
{END}
{PDOC00474}
{PS00548; RIBOSOMAL_S3_1}
{PS00734; RIBOSOMAL_S3_2}
{BEGIN}
***********************************
* Ribosomal protein S3 signatures *
***********************************
Ribosomal protein S3 is one of the proteins from the small ribosomal
subunit.
In Escherichia coli, S3 is known to be involved in the binding of
initiator
Met-tRNA. It belongs to a family of ribosomal proteins which, on the
basis of
sequence similarities [1], groups:
-
Eubacterial S3.
Archaebacterial S3.
Algal and plant chloroplast S3.
Plant mitochondrial S3.
Cyanelle S3.
S3 is a protein of 209 to 559 amino-acid residues. As signature
patterns, we
selected two
conserved regions. One is located in the N-terminal
section and
the other in the C-terminal section.
-Consensus pattern: [LIVMF]-[RE]-x-G-x(2)-[KRQ]-x(3)-[DNS]-x(2)-[FYW][SAV][NQDE]
-Sequences known to belong to this class detected by the pattern: ALL,
except
for plant mitochondrial S3.
-Other sequence(s) detected in SWISS-PROT: two carp gamma crystallins.
