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Cell biology Introductory tutorial What is a cell? • The cell is the structural and functional elementary unit of life, characterized by: – Self-replication and transmission of hereditary traits to daughter cells – Self-regulation and adaptive ability for survival – Being the result of a long evolutionary process • http://www.nature.com/scitable/topic/cell-biology13906536 What is cell biology? • The study of cell structure and functions • A cell contains all the information needed for its survival in its genetic material (DNA) The main types of cells - Based on the location and form of genetic material within the cell, there are 2 major categories of cells: - Prokaryotes – bacteria and archaea - Eukaryotes – cells found in most living organisms, from plants, protozoa to mammalians - Different by general cell morphology, genetic machinery, organelle diversity, and functions The life of an eukaryotic cell • A cell takes birth from another cell, by cell division • Time spent between two cell divisions is called interphase • During its adult life, a cell will develop its organelles to perform specific functions (to become specialized) Stem cells • Some cells remain in undifferentiated state in the adult organisms – stem cells • Characteristics of stem cells: – Undifferentiated – Multipotent – Self-renewed Differentiated cells • The specialization (differentiation) process of a cell into adult form is largely influenced by other cells through signaling cues • Physiologically, a cell dies through a programmed process (usually apoptosis) The eukaryotic cell The eukaryotic cell • Organelle – an intracellular element, characterized by a complex, specific molecular organization, inducing a distinct morphology and proper function(s). • Organelle classification: – Membrane bounded ( nucleus, endoplasmic reticulum, Golgi apparatus, lysosome, peroxisome, mitochondrion) – Without membrane (ribosome, cytoskeleton, proteasome, apoptosome) How large is a cell? (Cell dimensions) • The average size of a cell is 20-30 μm • The largest cell is the oocyte – 200 μm • Red blood cells have 7-8μm The human eye can see things as small as 0.1mm (can you transform that in μm?) Eukaryotic cell types • Cell biology provides knowledge about a MODEL (“all doing” cell), but living organisms are formed by different types of cells (differentiated cells) • The human body contains over 200 types of cells Cell study • The first tool used to study cells was the bright field light microscope (LM) • Details about cell organization came from electron microscopy (EM) • Deciphering mechanisms of cell functions came from LM, EM, biochemistry, biophysics etc. Differentiated cells The sum of events by which a cell acquires a specific form and function is called differentiation Each differentiated cell type means changes in morphology that help perform specific functions (become specialized) Transport of oxygen Mucus clearence Fighting bacterial infection How can cells be studied? • First microscopy was used, but in order to keep cells morphologically intact and well preserved, they need special treatment, so they would no longer be living entities fossil-collection.com Even preserved… Paraffin embedded cartilage under a light microscope http://biology.clc.uc.edu/Fankhauser/Labs/Cell_Biology/Cells_Lab/cartilage_chicken_100x_PA021963c.JPG More details are made visible by staining Cells unstained Cells stained apbrwww5.apsu.edu Even more details are obtained through electron microscopy Nucleus How else can cells be studied? • Microscopy offers morphologic details of a cell/ cell type • We are also interested in obtaining information about biochemical composition and/or functions of a cell/cell type How can cells be studied at molecular level? (I) • We can break them apart and separate the contents Osmotic shock N.B. these approaches allow us to correlate with organelle/cell functions How can cells be studied at molecular level? (II) • We can solubilize cells/organelles to isolate and/or purify biochemical components : proteins, fat (lipids), sugars (oligo-, mono saccharides) • Specialization of a cell can be highlighted not only by morphologic characteristics, but also by identification of specific proteins / lipids How can cells be studied at molecular level? (III) • We can also study living cells, using cell cultures – cells are kept in a Petri dish/culture flask in an incubator How can living cells can be studied? Conclusions • The cell is the elementary structural and functional unit of life • An eukaryotic cell is surrounded by a membrane and contains a nucleus and cytoplasm with organelles • We can study cells – living or dead (fixed) – through microscopy and biochemical methods