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12-2 DNA Structure What is a Macromolecule? DNA Stands for DeoxyriboNucleic Acid Ribose (Sugar) Without Oxygen Macromolecule classification -polymer of nucleotides A large molecule that is created by linking smaller subunits. DNA ● Shape of a double helix ● Made of repeating subunits called nucleotides ○ 5-carbon sugar, deoxyribose ○ Phosphate group ○ Nitrogen base (A,T,C,G) Nitrogen Bases What are the 3 components to a nucleotide? Purines Pyrimidines - Adenine (A) - Guanine (G) - Structure has TWO rings - Cytosine (C) - Thymine (T) - Structure has ONE ring A pairs with T G pairs with C Held together by hydrogen bonds Base Pair Rule (Chargaff’s Rule) Our genetic alphabet One side: A T A T C A T G C G G G A G T A C G C C C Think of the bases of DNA like letters. Letters form words … Other Side: T A T Words form sentences … Moving the “letters” of DNA around forms different “words” - CATCAT = purple hair - TACTAC = yellow hair Base Pair Rule What is the shape of DNA? Adenine pairs with_______. The sides of the DNA ladder are deoxyribose and _________. DNA Replication 12-2 DNA Replication In what phase of the Cell Cycle was DNA copied? ● Process of copying DNA ● Occurs in the nucleus before a cell divides ● 2 steps ○ Step 1: DNA molecule is “unzipped” ■ Hydrogen bonds between bases are broken ○ Step 2: New strands are made using the original strands by complementary base pairing ■ DNA polymerase - enzyme that pairs the nucleotides together ● Semi-conservative -- half of the old strand is saved Animation DNA Replication Let’s Practice! RNA ● Single stranded 12-3 RNA Structure and Types ○ Ribose sugar ○ NO thymine, uracil (U) instead ○ A pairs with U DNA: A T A G C G RNA: U A U C G C RNA DNA Ribose Deoxyribose Yes Yes Bases AUGC ATGC 1. mRNA (Messenger RNA) carries copies of instructions to assemble amino acids Length Short Long 2. rRNA (Ribosomal RNA) makes up ribosomes Strands Single Double Sugar Phosphate 3 types of RNA So, what is the relationship between genes and DNA? A section of DNA that codes for a protein and results in a trait. 3. tRNA (Transfer RNA) Transfer amino acids to ribosomes to be put together as proteins Name 3 differences between RNA and DNA. 12-3 Transcription and Translation The Central Dogma -- From DNA to Protein What is a protein? ● Building blocks of organisms (traits) ● Another macromolecule ● Polymer (long chain) of amino acid Transcription ● RNA is made from DNA ● Step 1: RNA polymerase binds to DNA and “unzips” the strands ● Step 2: One strand of DNA is used as template to create mRNA strand ● Step 3: RNA is released ● Occurs in the nucleus How do you use this diagram? CGU 1. Start in the middle 2. Move outward, finding the next base in the codon. Arginine What other codons code for Arginine? Before mRNA can move on… It must be edited Introns- non-coding sequences of mRNA Genetic Code mRNA Exons- sequences that contain the code for a protein Introns are removed by the Spliceosome Anticodons ● Located on the tRNA ● 3 base segments that correspond with the codon in the mRNA Read 3 letters a time= codon There are 20 amino acids (building blocks of proteins) Stop codons do not code for anything and end the sequence Start codon-AUG-Methionine Translation Process where proteins are made from RNA Occurs in the cytoplasm Translation Steps Step 1: Ribosome binds to mRNA Step 2: Ribosome matches tRNA anticodon to the mRNA codon sequence Step 3: New tRNA enters ribosome, the attached AA gets added to the polypeptide chain Step 4: Ribosome continues until stop codon, then it releases the chain and the mRNA What two things are attached to the tRNA? What is the start codon? What occurs in Transcription? The fat man sat on the cat. 1. The atm ans ato nth eca 2. TThefatmansa ton the cat What is a mutation? 1. 2. 3. Deletion Insertion Duplication 3. The fat mma nsa ton the cat 12-4 Mutations Discussion Questions: #1. Identify the change in the letter sequence that has been made in each of the altered phrase examples. #2. Do any of the altered phrases have the same meaning as the original phrase? #3. How many letters were changed (added, deleted, or duplicated) in each of the phrases? #4. How does this practice problem relate to DNA and our study of genetics? Gene Mutations Point Mutations Occur at a single point in DNA ● Substitution - one base is changed to another ○ Usually affect no more than one amino acid ● Frameshift mutations ● Occur at a single point in DNA ● Insertion - one base is added ● Deletion - one base is removed ● Usually affect MANY amino acids Gene Mutations Frameshift mutations Point Mutations Example of Insertıon: THE FAT CAT ATE THE RAT THE FAA TCA TAT ETH ERA Example of Substıtutıon: THE FAT CAT ATE THE RAT THE FAZ CAT ATE THE RAT Example of Deletıon: THE FAT CAT ATE THE RAT THE ATC ATA TET HER AT Change in DNA sequences Can happen in the gene or the whole chromosome Chromosomal Mutations Duplication Remember chromosome structure… ● Change in the number of or structure of a chromosome ● Could change the locations or number of genes ● 4 types: ○ Duplication ○ Deletion ○ Inversion ○ Translocation Deletion Inversion Translocation ● A part of the chromosome is removed ● Reverse the direction of parts of chromosomes ● Part of one chromosome breaks off and joins another BEFORE AFTER ● Produce extra copies of parts of chromosomes ● Segment is repeated BEFORE AFTER What do mutations do? ● Most have no effect ● They are the source of genetic variability ● Helpful mutations ○ Plants with extra sets of chromosomes are often larger and stronger ■ Ex: Bananas ● Harmful mutations ○ Many different disorders like cystic fibrosis and sickle cell ○ What is one that we talked about last unit?