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Name __________________________________________________________________ Test Date _Fri, 12/9 UNIT 6 - DNA & THE CELL CYCLE The third statement of the Cell Theory states that all cells come from _pre-existing cells___________. The continuity of life is based on the reproduction of cells or _cell division_____________. In most organisms, cells increase to a certain size and then divide into two cells. This cycle of growth and cell division is known as the _cell cycle_______. The cell cycle is defined as the period of time from the beginning of one _cell division_________ to the _beginning of the next____________. This type of cell division is _asexual_______ reproduction. In asexual reproduction, the genome or _DNA__________ of the cell is exactly replicated resulting in _2_______ _identical_______ cells. I. IMPORTANCE OF ASEXUAL REPRODUCTION (p. 241-243) A. Single-celled Organisms Single-celled organisms belonging to kingdoms __Archaebacteria__, _Eubacteria______, _Protista_________, and _Fungi______, use asexual reproduction to _reproduce – make new organisms______________. B. Multicellular Organisms 1. Growth & Development – Organisms grow through _cell division__________, rather than unlimited growth of a cell. Surface Area to Volume Ratio – As the size of an object increases, the _volume________ increases at a much faster rate than the _surface area________; therefore, the surface area to volume ratio becomes a _smaller___ number. In a cell, the _cell membrane___________ represents the surface area and the _cytoplasm_____________ represents the volume. At a certain point, a cell can no longer meets its needs and maintain _homeostasis________; therefore, cells only grow to a certain size. 2. Renewal & Repair – Cell division is used to replace cells that die from normal wear & tear; for example, _skin cells_____ and _blood cells______. Other types of cells maintain the ability to divide, but keep it in reserve unless severely damaged; for example, _liver cells______________. Other cells do not appear to divide at all in a mature human; for example, _muscle cells_______ and _nerve cells_____. II. CELL CYCLE IN PROKARYOTES (p. 475) All _bacteria_____________ undergo a type of cell division known as _binary fission________. Binary fission is a less complex, faster process than eukaryotic cell division because bacteria lack a _nucleus____, _membrane-bound__ _organelles___ and have only _one_____ chromosome. III. CELL CYCLE IN EUKARYOTES - AN OVERVIEW (p. 245) There are two main parts to the eukaryotic cell cycle: A. Interphase - Accounts for about _90%__ of cell cycle. This is the period of time in which a cell is carrying out _normal activities, _doing its cell job_______. _Protein_____ synthesis is occurring at a high rate. The cell’s DNA is in the form of _chromatin_____, long, fine strands of DNA wrapped in _protein____. B. M-Phase – Period of time in which cell division occurs. Consists of two main events: Mitosis – Division of the _nucleus___ Cytokinesis – Division of the _cytoplasm____ IV. A CLOSER LOOK AT INTERPHASE There are three stages to interphase: G1 - Cell _grows______, carries out normal cell activities such as _cellular respiration, metabolism________. Period in which _protein_______ production is highest S - _Synthesis____________. Replication of _DNA__; known as the “_Point of No Return___”. Replication takes place in the _nucleus___ of the cell. G2 - Preparation for _cell division___. _Centrioles______ are replicated in _animal___ cells. At the end of interphase . . . ________________ replicated ________________ _____ Protein microtubules that will form spindle fibers _DNA___ has been replicated – still in _chromatin______ form. _Centrioles_________ have been replicated in _animal_______ cells only. Results in 2 pairs of centrioles, composed of _microtubules_______. The _nuclear envelope____ and _nucleolus__ are still present. _____________ _________ _ ____________________ V. A CLOSER LOOK AT MITOSIS (pp. 246-248) Mitosis, also known as the _M - Phase_, is described in four stages, but it is a continuous process. A. PROPHASE – In prophase, the nucleus is preparing to divide. This includes . . . _________________________ ____________________ ____________________ ______________________ ________________________ _Nucleolus_____ and _nuclear__________ _envelope____ disassemble. Replicated _DNA___ thickens & condenses results in _chromosomes_____ made up of 2 _sister chromatids__ held together at the _centromeres________ _Centrioles________ begin moving to opposite poles of the cell. _Microtubules______ form _spindle fiber network______. Specific spindle fibers attach to the sister chromatids at the _kinetochore___. centromere). Other fibers, known as non-kinetochore B. METAPHASE – In metaphase, the sister chromatids are organized in the microtubules _middle____span of the thecell. cell to aid in support and structure. _____________________ ______________________ __________________ ______________________ _Spindle fiber______ network is fully formed with _centrioles______ at opposite ends. Each _sister chromatid_________ is attached to a spindle fiber at the _kinetochore________ located at the _centromere____________ Sister chromatids align at the _equator_______ of the cell. C. ANAPHASE – In anaphase, the sister chromatids are pulled _apart_______. ______________________ ______________________ ______________________ _________________ ________________________ ________________________ D. TELOPHASE – By the end of telophase . . . ____________ ______________ _Centromeres__________ split. Sister _chromatids_________ are pulled apart by _spindle fibers___________; move to opposite ends of the cell. Genetic material is now known as daughter __chromosomes_______. Cell elongates; prepares for two new nuclei. Complete and _identical_______ set of _chromosomes_______ at each pole of the cell. _Spindle fibers _____________ disassemble. New _nuclear envelope_____________ forms around each group of chromosomes. DNA uncoils _chromatin__________ _Nucleolus___________ reforms _ribosomes________ are produced _protein synthesis_ resumes cell _metabolism__________ resumes __________________ E. CYTOKINESIS – This refers to the actual division of the _cytoplasm_____________. Cytokinesis begins during _telophase______ and differs in plant versus animal cells because plant cells have a _cell wall________. 1. Animal Cell – In the final stages of telophase, the _cell membrane_________ pinches in. This is referred to as a _cleavage furrow_________ and is due to the action of _microfilaments (actin)____. This cleavage furrow deepens until the parent cell is pinched in two, producing two separate, _identical__________ daughter cells. 2. Plant Cell – There is no cleavage furrow in plant cells. Instead, during late telophase, _vesicles____________ from the _Golgi apparatus_________ move to the center of the cell where _cellulose____________ and other materials they contain come together to form a _cell plate______________, which eventually develops into a _cell wall____________. _____________________________ _ ____________ _____________________ ___________________ Cell _____________ _______ _______ _ ______________________ Cell _____________________ _____________________ VI. CONTROL OF THE CELL CYCLE (pp. 250-253) A. Timing of the Cell Cycle The timing of the cell cycle is regulated by proteins known as _cyclins_________ that bind with enzymes known as _kinases__________ to form a complex called _cyclin-dependent kinases____________ or _CDKs_______. These _enzymes________ are responsible for monitoring checkpoints in the cell cycle. If the progression of the cell cycle is too slow, _dying cells are not replaced___________________. If the cell cycle progresses too quickly, the result is uncontrolled cell growth or _cancer_________. This is harmful for many reasons o If a cell spends all of its time dividing, _it is not doing its cell job_____ o The rapidly- dividing, nonfunctional cells steal _nutrients_______ from healthy, functioning cells causing _them to die_______. o The rapid replication of _DNA____ results in a greater risk of _mutations____. B. Stem Cells Stem cells are _undifferentiated_____ cells that have the ability to _reproduce forever_______. Stem cells that can give rise to many types of cells are said to be pluripotent___________. Although stem cells are found in certain locations in adults, most research involves the use of _embryonic_____________ stem cells, due to the fact they are considered to be “_immortal_______” and capable of unlimited specialization. Scientists hope that stem cells may be used as implants to replace _damaged tissues & organs_____, but there are many _legal____________ and _ethical_______ concerns. C. Number of Cell Divisions per Cell Each cell is programmed to divide a certain number of times, and then it will not divide again. This is monitored by _telomeres_________, a series of DNA _nucleotides_______ found at the tips of each _chromosome______. As DNA is _replicated____ in __S____ of the cell cycle, the telomeres shorten. Once they reach a critical length, the DNA does not replicate again, and the cell does not _divide______. _Cancer cells___ and _stem cells____ produce an enzyme known as _telomerase____, which restores the chromosomes back to their original length, thereby theoretically making the cell capable of _unlimited_______ cell division. A CLOSER LOOK AT DNA & REPLICATION I. DNA – THE DISCOVERY OF THE MOLECULE OF INHERITANCE (pp. 287-294) DNA contains the _genetic code_______ and the _working instructions______________ for a cell. Scientists in the early 1900s realized that inheritance was dependent on _genes_____ found on _chromosomes_____ and that chromosomes were composed of _DNA__ and _protein_____. It wasn’t until the 1940s that scientists established _DNA______ as the molecule of inheritance, and still another 15 years passed before the structure of DNA was discovered. A. Griffith (1928) Discovered that bacteria can take up genetic material from environment in a process known as _transformation______. Performed experiments with _mice_____ and bacteria known as _Pneumococcus______. o Mixed harmless living bacteria with dead _pathogenic_______ bacteria and injected them into mice. o Mice died. B. Avery, et.al. (1944) Set up experiments to identify “transforming substance” discovered by Griffith Used enzymes that destroyed carbohydrates, lipids, proteins, and RNA . . . transformation still occurred. Used an enzyme that destroyed DNA, _transformation did not occur; mice survived_________________. Concluded that _DNA_____ stores and transmits the genetic information from one generation of an organism to the next. Scientific community did not completely accept their conclusion C. Hershey & Chase (1952) Used a virus known as a _bacteriophage_____ which infects _bacteria_____. Viruses are composed of _DNA___and _protein____; require a _host___ cell in order to replicate. Hershey & Chase recognized that virus must inject its genetic material into the bacterial cell for replication to take place. Used labeled _isotopes_______ to determine whether DNA or protein was injected into bacterium. Hershey & Chase concluded that the genetic material of the bacteriophage was _DNA____. D. Watson & Crick (1953) Used molecular models to solve the 3-dimensional structure of DNA “Borrowed” an x-ray of DNA taken by _Rosalind Franklin_________ to solve the puzzle Proposed a _double helix_______ structure with a backbone of alternating _deoxyribose______ and _phosphate groups______ with _nitrogen bases____ paired in the middle II. STRUCTURE OF DNA _Deoxyribonucleic acid_______ is a _nucleic acid____ made up of _nucleotide___ monomers. Each DNA _nucleotide_________ is composed of : o _Deoxyribose (5-carbon sugar)___ o _Phosphate group_________________ o _Nitrogen base________________________ Strong, stable _covalent_____ bonds hold the components of each nucleotide together. In addition, nucleotides form strong _covalent_____ bonds with other nucleotides, resulting in a long strand of nucleotides. Double helix created by _hydrogen_____ bonding between _nitrogen bases_____ The diameter of DNA is uniform due to specific pairing of nitrogen bases o Purines – double-ringed nitrogen bases _guanine______________ _adenine______________ o Pyrimidines - single-ringed nitrogen bases _thymine______________ _cytosine______________ o _Purine____ always base pairs with a _pyrimidine_____, specifically … _Adenine____ base pairs with _thymine_____ _Guanine____ base pairs with _cytosine_____ o _Watson____ and _Crick_____ determined this structurally because the _diameter____ of DNA is uniform. o _Chargaff____ determined this chemically. His chemical analysis of DNA from many different organisms always showed that the % of adenine = % _thymine___ and the % of guanine = the % _cytosine___. These findings are known as _Chargaff’s rules_____. The two strands of nucleotides are _anti-parallel_________; that is, they run opposite to each other. It is the _pattern_____ and _number____ of nucleotides that makes each gene unique. DEOXYRIBONUCLEIC ACID adenine covalent bond cytosine deoxyribose guanine hydrogen bond nitrogen bases nucleotide phosphate group purines pyrimidines thymine 5’ end 3’ end III. DNA REPLICATION (pp. 295-299) Prior to _cell division____, the DNA must _replicate_____. This occurs in _S____ of _interphase____. During this part of the cell cycle, DNA is in the form of _chromatin____. DNA can replicate itself exactly due to _Chargaff’s (base pairing) rules____. Replication occurs in the _nucleus_____ of the cell and requires the participation of several _enzymes______. Replication may be summarized in the following steps: DNA is “unzipped” by the enzyme, _helicase__. Helicase breaks the _hydrogen______ bonds between the _nitrogen bases______. The point where the unzipping begins is known as the _origin of replication_____. The continuation of the unzipping is called the _replication fork_____. This occurs in several places in each _chromosome_, much like a _broken zipper_____. _Single-strand binding proteins___________ hold the separated DNA strands apart. Another enzyme, _topoisomerase_____ moves ahead of the _helicase______ to relieve tension in the double helix as it is being unzipped. The enzyme, _DNA polymerase_______ adds nucleotides to both sides of the DNA molecule according to _base pairing______ rules; however, DNA polymerase has two restrictions: 1) It can only add nucleotides in a _5’ – 3’____ direction. 2) It can only add nucleotides to an existing strand. Before DNA polymerase begins moving in nucleotides, an _RNA primer_____ must be put in place. Eventually this primer is removed and replaced with DNA nucleotides. The two sides of the DNA molecule are replicated differently because nucleotides can only be added in a _5’ – 3’____ direction: o One side of the DNA molecule is being replicated in the same direction as the _replication fork____. This is known as the _leading____ strand. Nucleotides are moved in by _DNA polymerase____ in a _5’ – 3’_____ direction as the DNA is unzipped. o On the other side of the DNA molecule, nucleotides are added _away_______ from the replication fork. This is known as the _lagging_________ strand. Short segments of nucleotides are synthesized, each with a new _RNA primer_______, as the DNA is unzipped. These short segments are known as _Okazaki fragments_______. Eventually, another enzyme known as _ligase____ “glues” together the _Okazaki_____ fragments to create a continuous strand of nucleotides. Another type of _DNA polymerase______ proofreads the replicated DNA to minimize the chance of _mutation_____. The result is two _identical________ DNA molecules, each new DNA consists of one _original___ strand and one _new___ strand. This is known as the _semi-conservative______ model of replication. These two identical DNA molecules are the _sister chromatids_____ that proceed through _mitosis________. Once replication has been completed, the cell moves into _G2___ and then, _prophase___ of _mitosis___. IV. A DETAILED VIEW OF DNA REPLICATION