* Your assessment is very important for improving the workof artificial intelligence, which forms the content of this project
Download Respiration Worksheet
Nutriepigenomics wikipedia , lookup
Ridge (biology) wikipedia , lookup
Artificial gene synthesis wikipedia , lookup
Minimal genome wikipedia , lookup
Medical genetics wikipedia , lookup
Inbreeding avoidance wikipedia , lookup
Gene expression programming wikipedia , lookup
Skewed X-inactivation wikipedia , lookup
Behavioural genetics wikipedia , lookup
Public health genomics wikipedia , lookup
Gene expression profiling wikipedia , lookup
Neuronal ceroid lipofuscinosis wikipedia , lookup
Population genetics wikipedia , lookup
Polymorphism (biology) wikipedia , lookup
Biology and consumer behaviour wikipedia , lookup
Pharmacogenomics wikipedia , lookup
Genome (book) wikipedia , lookup
Epigenetics of human development wikipedia , lookup
X-inactivation wikipedia , lookup
Designer baby wikipedia , lookup
Genomic imprinting wikipedia , lookup
Human leukocyte antigen wikipedia , lookup
Genetic drift wikipedia , lookup
Microevolution wikipedia , lookup
Quantitative trait locus wikipedia , lookup
A. Gregor Mendel Mendelian Genetics Worksheet - ANSWERS The essence of genetics or the study of heredity comes from the Austrian monk Gregor Mendel. In the 1800s this Catholic priest worked his monastery garden and raised all the fruit and vegetables needed. As he had a science background, he started studying how traits were passed down from parent (P generation) to the offspring (F1 generation) and so on. Using hundreds of pea plants he discovered the basics of genetics, which is why we today call it Mendelian genetics. 1. 2. 3. What are the offspring of the F1 generation referred to as? F2 generation Why did Gregor Mendel choose pea plants to study as opposed to potatoes or tomatoes? Pea plants grow fast, and since they have both male and female parts, it was easy to control fertilization by cutting the stamens of the flowers to ensure he had control. Briefly describe the essence of Mendel’s first experiments with two purebred pea plants. Use the trait pea color for your description. Mendel chose a pure bred white flower and a pure bred purple flower to cross-pollinate called the P generation. The offspring, F1 generation showed 100% purple flowers. He then let the F1 generation self-pollinate and the next generation, F2, showed 75% purple flowers and 25% white flowers. B. Mendelian Laws Through Mendel’s many years and hundreds of pieces data, he threw out many old ideas about heredity and came up with four hypotheses that turned into two laws that still hold true today. The first hypothesis stated that individuals have two copies of their genes, one from each parent. The second hypothesis says that there exist two different versions of the same gene represented by letters. We now call those versions alleles. The third hypothesis states that if two different alleles occur together, one may be expressed while the other is not. We say one is dominant and the other is recessive. His fourth and final hypothesis states that when gametes are formed, alleles for each trait separate independently during meiosis. From these hypotheses which have been proven true time and again, we now have two laws that can be T t attributed back to Mendel’s research. The first law is called the law of segregation and it says that because each individual has two different alleles, it can produce two different types of gametes. If the gene is Y y represented by the letter R, it can produce R allele or r allele, which represents different forms of the same trait. The second law is called the law of independent assortment and it states that genes for different traits are inherited independently of each other. For example, if a person has gene A and gene B on the same chromosome, they are both inherited without being tied to the other. 4. 5. 6. 7. What is Mendel’s first law? The law of segregation Explain the first law in terms of plant height (T). During meiosis, when making a gamete, the two Ts separate into different gametes (T or t) What is Mendel’s second law? The law of independent assortment states that different alleles coding for different traits will separate independtly of each other during meiosis or gamete-making. Explain the second law in terms of both height and pea color (T and Y). The two Ts and two Ys will separately independently of each other giving each gamete one T and one Y (TY, Ty, tY, ty) C. General Rules Alleles are said to be dominant or recessive. A dominant allele expresses (shows) itself even if there is only one. For example, if the trait is eye color, brown is dominant. Therefore, one B allele will make eye color brown. A recessive allele is only expressed when no dominant allele is present. Blue eyes are recessive to brown eyes so the only time blue eyes are expressed is when there are two as in bb. Dominant traits determine the allele used. For example, if grey is the dominant skin color gene in aliens, white is recessive. The allele used to represent both colors is g for grey. To differentiate grey and white, G is grey since it is dominant and g is white since it is recessive. If the combination of the two alleles is such that both alleles are dominant, it is said to be homozygous dominant. If both alleles are recessive, it is said to be homozygous recessive. If the two alleles are different, it is said to be heterozygous. 8. If red fur is dominant over blue fur, what are the alleles for the different furs? R = red, r = blue 9. If yellow peas are dominant over green peas, what are the alleles for the different color peas? Y = yellow peas, y = green peas 10. What would the alleles for a heterozygous grey alien be? Gg 11. What would the alleles for a homozygous recessive skinned alien be? What color is it? gg = white 1 D. Punnett Squares and Probability Punnett squares are a method in which all the possible offspring types are determined based on the parents’ genes. The genes of individuals (represented by alleles) are called genotypes. The physical appearance or phenotype of an individual is a result of what the genotype determines. For example, if freckles are dominant over no freckles, the genotype Ff would have the phenotype of having freckles. The parents’ genotypes determine what possible alleles are given to the offspring. The allele type varies and according to the laws of segregation and independent assortment, two different genes with different alleles separate completely and recombine in four possible gamete combinations. An easy way for students to remember how to find the possible gametes, the acronym FOIL (first, outside, inside, last) is often used. For example, if the parent genotype is AaBb, the four possible gametes are AB, Ab, aB, and ab. Using a Punnett square, the gametes are combined in such a way as to determine all the possible genotypes. A ratio of the number of genotypes is gathered by adding up all the same genotypes and comparing them to the others using a colon between the numbers. A ratio of the phenotypes of the offspring are gathered in a similar manner. 12. What is a genotype? The genes (and therefore alleles) of an individual 13. What is a phenotype? The appearance or expression of the genes (or alleles) 14. If freckles are dominant over plain cheeks, and cleft chin is dominant over a smooth chin, what would the genotype of a parent be who is heterozygous freckled and heterozygous cleft? FfCc 15. What are the possible gametes of the father? Use the FOIL method to determine. First = FC; Outside = Fc; Inside = fC; Last = fc 16. Using a Punnett square, what are the possible offspring of the parents if they both are heterozygous for freckles and cleft chin? FC Fc fC fc FC FFCC FFCc FfCC FfCc Fc FFCc FFcc FfCc Ffcc fC FfCC FfCc ffCC ffCc fc FfCc Ffcc ffCc ffcc 17. What are the genotypic ratios and phenotypic ratios of the offspring of those two parents? Genotypic ratio: 1 FFCC; 2 FFCc; 2 FfCC; 1 FFcc; 4 FfCc; 2 Ffcc; 1 ffCC; 2 ffCc; 1ffcc Phenotypic ratio: 9 freckles/cleft: 3 no freckles/cleft: 3 freckles/no cleft: 1 no freckles/no cleft E. Pedigrees A pedigree is a type of family tree that traces a particular trait that runs in an entire family. Circles represent females while squares represent males. Lines connecting two individuals horizontally represent marriage or a coupling in which offspring were produced. Vertical lines emanating from the horizontal connector line represent the offspring of the coupling. An individual family member with the trait is shaded a dark or different color. An individual who carries the trait (heterozygous and phenotype of the dominant trait) is half-shaded. Each generation has a Roman numeral and each individual of that generation has Arabic numbers. 18. According to the pedigree on the right, individual II-2 is what sex? male 19. According to the pedigree, individual I-2 is what sex? female 20. If the trait being traced is brown eyes, what phenotype is individual II-3? brown 21. What is the phenotype of individual III-1? Brown eyes I II 1 1 2 2 3 4 1 2 III F. Sex-Linked Traits Sometimes a particular trait is found on a sex chromosome, usually X. These genes are called sex-linked genes only because they are located on the sex chromosome X. The characteristic has nothing to do with the sex of the individual. Since females have two X (XX) and males only have one (XY), males have a higher chance of expressing a defective 2 recessive gene since they don’t have another X to act as the dominant X. Females with only one defective allele are said to be carriers. Their phenotype is normal and they do not express the disorder. A Punnett square to determine sex-linked inheritance must include the sex chromosomes X and Y using a lowercase superscript to denote the defective recessive gene located on the X chromosome. A few sex-linked disorders are commonly found worldwide. The first is colorblindness (noted as Xc) in which an afflicted individual inherits a defective gene coding for the color-detecting cones of the eye’s retina. This individual may have a hard time distinguishing two colors. A second type of sex-linked disorder is the blood clotting defect called hemophilia. An individual with hemophilia cannot produce adequate blood clots and may bleed to death as a result. This disease is noted as X h where the h is the defective blood-clotting protein. A third type of sex-linked disease is Fragile X syndrome. A person with Fragile X inherits an addition of 600+ nucleotides on the X chromosome which results in abnormal facial features and intellectual disabilities. This is denoted as Xf. The fourth and final common sex-linked disorder is Duchenne’s muscular dystrophy (Xd) in which the individual inherits a defective muscle protein causing progressively weakened muscles. The average life span for someone with Duchenne MD is 25 years. 22. What is a sex-linked trait? A trait in which the gene is located on the X chromosome 23. Why are males more prone to inherit the disease or disorder? Males only have one X chromosome and therefore will automatically express the defect. Females have two Xs and the dominant healthy X will have it’s genotype (normal) expressed. 24. Why are females considered carriers? Why can’t males be carriers? If a female has one affected X and one normal X, she is a carrier and does not show the disorder. Males only have one X so they either have it or not, never a carrier. 25. Cross a male afflicted with colorblindness and a normal woman. X X Xc XXc XXc Y XY XY 26. If a female carrier of Fragile X syndrome has children with a normal male, what are the chances that a boy will be born with Fragile X syndrome? Xf X X XXf XX Y XfY XY 50% or ½ 27. Cross a male hemophilia with a female carrier of hemophilia. What are the chances they will have a girl with hemophilia? X Xh Xh Y XXh XY XhXh XhY 50% or ½ 28. Cross a female carrier of Duchenne’s muscular dystrophy with a healthy male. What are the chances the will have a girl with Duchenne? Xd X X Y d XX XdY XX XY 0% G. Autosomal Disorders Most characteristics are found on chromosomes 1-22 or the autosomes. Since they are not linked to the individual’s sex, they are equally passed down to males and females. If a dominant allele codes for the defect, that trait is considered to be dominantly inherited and either the homozygous dominant or heterozygous genotype will express the defect. One such autosomal dominant disease is Huntington’s disease where the afflicted individual inherits the H allele. It is lethal and ends with the individual losing most brain tissue to disease. This disease is unique in that the person does not show any symptoms until later in life, usually after having children. As a result, the disease stays in the human gene pool. The 3 Autosomal Dominant Inheritance other type of autosomal dominant disorder is dwarfism, in particular, a form called Achondroplasia. Individuals with dwarfism have a defect in bone growth of the long bones, the arms and legs. As a result, the average height for Achondroplasia dwarves is about 4’ tall. Dwarfism is caused by one dominant allele, D. However, two dominant D alleles causes death, termed double dominant lethality. Most autosomal disorders are caused by recessive alleles, thereby requiring two defective alleles to produce the disorder. Any person who is heterozygous is disease free (a healthy phenotype) but is considered a carrier. There exist five common autosomal recessive disorders. The first one is albinism characterized by a defect in the pigment melanin. Individuals homozygous for aa are termed albino and may have vision and skin problems. Another common autosomal recessive disease is cystic fibrosis in which the mucus producing protein is defective resulting in excessively thick and sticky mucus which can cause death. A person with cystic fibrosis may live to age 30. Another autosomal recessively inherited disease is the lethal Tay-Sachs in which the lethal t causes a defect an enzyme in neural cells. If the cells cannot break down lipid or fat, it accumulates in the nervous tissue and will cause death by the age of 5. Phenylketonuria or PKU is a recessively inherited autosomal disorder in which the enzyme that breaks down the amino acid phenylalanine is defective. An accumulation of this amino acid can result in brain damage causing intellectual disabilities. The final recessively inherited disorder is called neurofibromatosis or NF. NF results in mostly physical deformities of the skin and/or bone caused by tumors in nervous tissue which can occur anywhere on the body. 29. What is the difference between an autosomal disorder and a sex-linked disorder? An autosomal disorder occurs on any chromosome 1-22, whereas a sex-linked disorder occurs on chromosome 23, the sex chromosomes. 30. What is the difference between a dominant and recessive autosomal disorder? A dominant disorder requires only one dominant allele to express the phenotype. A recessive disorder requires 2 alleles to express the phenotype. 31. Are there carriers in autosomal dominant disorders? Why or why not? NO. Since it only takes one allele to contract the disorder, you either have it or you don’t. 32. Why does Huntington’s still exist if it is deadly and dominantly inherited? Since the phenotype (the disease) isn’t expressed until later in life (around age 50), the afflicted individual may have already passed down the diseased allele H. 33. Cross a male with Huntington’s disease with a normal female. What are the chances a child will have Huntington’s? h h H Hh Hh h hh hh 50% or ½ 34. What do two parents with Achondroplasia have to think about before having children of their own? Whether to risk having a child since two dominant alleles (A) result in the death of the individual. The term is called double-dominant lethality. 35. Why does Tay-Sachs still exist even though an individual afflicted dies by the age of 5? Individuals may still be carriers and pass down the lethal t allele. 36. Cross two PKU carriers. What is the chance a child will be born with PKU? P p P PP Pp p Pp pp 25% or ¼ H. Polygenic Inheritance In simple inheritance, one gene such as A codes for one trait (albinism). There exist special circumstances in which many genes code for one particular trait. One clue that many genes are present is the use of more than one letter, for example A and B or more. In humans, four particular circumstances use polygenic inheritance: eye color, hair color, skin color, and height. Since many genes code for one trait, there may be many intermediate phenotypes. Each dominant allele adds to the final tally of the trait, whether it is pigment or inches in height. In the case of eye color, brown eyes have many pigments, which accounts for the fact that at least four genes (eight alleles total) code for a person’s eye color. Hair color uses two different traits, brown melanin and red melanin, each with many genes, to give a person his or her final hair color. Skin color is very complex and not completely understood. At least four genes are known to determine an individual’s skin color. This results in many phenotypes all falling somewhere in between the two extremes of very dark and very light. Finally, height also has many genes coding for it. It is special in that a person’s environment or upbringing can determine whether or not he or she reaches his or her maximum potential for height. If the genes are known and the extremes of the trait are known, it is possible to calculate how much each dominant allele contributes to the final phenotype. 37. Why is the term “polygenic” a good name for this type of inheritance? The prefix “poly” means “many” and the root word “genic” means genes. Polygenic inheritance is many genes coding for one trait. 4 38. If a tree is homozygous for SHORT alleles giving it a genotype of aabbccdd, the tree is only 5 ft tall (60 inches). If a tree is homozygous for TALL alleles giving it a genotype of AABBCCDD, the tree is a whopping 25 ft tall (300 inches). How tall would a tree with the genotype AaBbCcDD be? Step 1: 300”-60” = maximum range of 240” Step 2: 240”8 alleles total = 30” per dominant allele Step 3: 30” x 5 dominant alleles in given genotype = 150” added for all dominant alleles Step 4: 150” + 60” = 210” or 17’6” tall 39. An individual is homozygous dominant for black hair given the genotype AABBCCDD with a melanin score of 100. Another individual is homozygous recessive with the genotype aabbccdd. This individual has blonde hair with a melanin score of 20. What is the melanin score of an individual with the genotype AabbCCdd? Step 1: 100-20 = 80 Step 2: 808 alleles total = 10 color per each dominant allele Step 3: 10 x 3 dominant alleles = 30 color added Step 4: 30 + 20 = color score of 50 I. Incomplete Dominance hh H’H’ H’h In simple heredity, an uppercase allele means it is a dominant allele and its phenotype is always expressed. This is not always the case as some “dominant” alleles aren’t truly dominant. These are called incompletely dominant where the heterozygote shows a blend of the incomplete dominant and the recessive. These uppercase alleles may be designated with a ‘ or “prime” to signal that they do not act dominantly. In the case of flowers, snapdragons’ red pigment behaves incompletely dominant where R’r is pink! In order to see the “dominant” phenotype, the genotype must be homozygous dominant. The same holds true for the recessive phenotype, as is typical. In humans, nose size and hair texture act similarly. A large nose (L) is incompletely dominant (L’) over a small nose (l) making the heterozygote (L’l) a medium-sized nose. Curly hair is incompletely dominant (C’) over straight hair (c) making the heterozygote individual wavy-haired (C’c). 40. Why is using the character ‘ a good practice when noting incomplete dominance? Since the uppercase allele is still used, unless the ‘ is present, can’t differentiate if it’s completely dominant or incompletely dominant. 41. Blue hair in aliens is incompletely dominant over red hair. Cross two heterozygous aliens. a. What are the genotypes? B’b b. What phenotype is the heterozygote? purple 42. Wide-set eyes are incompletely dominant over close-set eyes. a. What are the gentoypes? Wide-set = W’W’ Close-set = ww b. What phenotype is the heterozygote? W’w = average/normal set J. Multiple Alleles So far, all genes have been coded for by two alleles, one from the father and one from the mother. This will always be the case as each parent can only donate one allele. Certain genes are coded for by more than two alleles, so the phenotype depends on which alleles are passed down and the order of dominance. This inheritance pattern is termed multiple alleles and although it uses more than two alleles for one gene, each allele uses one letter, often times with superscripts to differentiate variances. A prime example of this is in human blood types where the letter I denotes the protein immunoglobulin. A genotype of IA denotes the phenotype type A blood, IB denotes type B blood, and the recessive i denotes the absence of A or B which is termed type O blood. 43. How many different letters of genes are used to denote multiple alleles? Why? ONE. There is only one trait so it must have the same letter. 44. In corn kernel color, yellow is dominant over white, white is dominant over blue, and blue is dominant over red. What should the alleles be to represent each phenotype? Yellow = Y White = YW Blue = YB 5 Red = Yr or y 45. Cross a pure bred blue corn plant with a heterozygous yellow-white corn plant. Y YW YB YB YYB YYB YWYB YWYB K. Codominance The final complex pattern of heredity is termed codominance where two dominantly inherited alleles code for the same trait. Since both alleles are dominant, the phenotype shows BOTH phenotypes, not a blend, but each phenotype equally. In the case of humans, two particular traits use codominance. The first trait is sickle-cell anemia where the heterozygous individual has both round red blood cells (R) and sickle-shaped red blood cells (S). The genotype for this may be RS. Another human trait that uses codominance is blood type where type A and type B are dominant, therefore an individual with the IA and IB allele is said to be blood type AB. This type of inheritance pattern is also frequently found in flower petals, and certain furry mammals such as roan cattle, a codominant red and white phenotype (RW). 46. Sickle-cell anemia is a codominant trait. Cross two heterozygous individuals. R S R RR RS S RS SS 47. What percent of offspring may contract sickle-cell? 25% 48. Why is blood type in humans considered both multiple alleles and codominance? Blood type uses three alleles (IA, IB, i) therefore it is multiple alleles, and the alleles IA and IB are both dominant as shown by the blood type AB (IAIB) making it codominant. 6