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DNA Technology and Biotechnology Biotechnology = refers to the technology used to manipulate DNA Procedures are often referred to as Genetic Engineering DNA is the genetic material of ALL living things All organisms use the same genetic code Genes from one organism can be transcribed and translated when put into another organism Examples... • Human genes (and other animals) are routinely put into Bacteria in order to synthesize products for medical treatments and commercial use i.e. human insulin, human growth hormone, vaccines “Recombined” DNA Recombinant DNA = refers to DNA from two different sources being combined Individuals receiving genes from other species are called Transgenic Vectors • Vector = anything used to transfer a gene into a host cell Plasmids and Viruses are the most common vectors used What’s the Difference? Virus: (Protein coat & DNA or RNA core) takes over the host cell machinery by incorporating itself into the host DNA to make more virus particles Plasmid: a small ring of DNA, incorporates itself into the host DNA, cloned each time the host DNA is reproduced A vector must be capable of self replicating inside a cell! Tools of the Trade • Restriction Enzymes: discovered in 1970’s in bacteria Used naturally in bacteria as a defense mechanism against viruses (bacteriophages) “Cut” DNA at specific base sequences • Example: EcoR1 always cuts DNA at GAATTC as shown: Other restriction enzymes cut at different sites, some examples are listed below: • • • • • Enzyme Bam HI Hae III Pst 1 Hind III Cutting Sites GGATCC GGCC CTGCAG AAGCTT Sticky Ends • Sticky Ends & Recombinant DNA: Fragments of DNA that have been cut using restriction enzymes have unpaired nucleotides at the ends called Sticky Ends Sticky ends have complementary bases , so they could rejoin If the vector and the gene to be cloned are both cut with the same restriction enzyme, they will both have complementary sticky ends After cutting, 2 DNA samples are mixed Result = Recombinant DNA The enzyme DNA ligase seals the fragments together Genomic Libraries • Genomic Libraries: collection of all the genes that an organism possesses Bacteria or viruses can be used to store fragments of DNA from another species PCR • Polymerase Chain Reaction (PCR): used to make numerous copies of small pieces of DNA • Requires = primers, DNA polymerase, & nucleotides How Does PCR Work? 1. The DNA is heated to about 95O C to separate the 2 strands of the double helix • 2. After the strands are separated, the DNA is cooled to about 50OC and the primers attach • 3. Temp. is then raised to 70OC so the polymerase will attach and copy the strand • 4. The DNA Replication process repeats itself as the solution is heated and cooled at regular intervals DNA Fingerprints • DNA Fingerprinting (RFLP Analysis): banding pattern produced on a gel representing the accumulation of DNA fragments of various sizes Gene Products and the Uses of Genetic Engineering E. coli used to produce insulin Mammalian cells used to produce proteins such as hormones Plant cells can be engineered with new properties (insect resistance) Bovine Growth Hormone (BGH) used to increase milk production in cows by about 10% • Animal viruses can be engineered to carry a gene for a pathogen’s surface protein so the virus can be used as a vaccine Gene Products and the Uses of Genetic Engineering Techniques were used to map the human genome through the Human Genome Project Could provide tools for diagnosis and possible repair of genetic diseases Gene therapy could be used to cure genetic diseases by replacing defective or missing genes Social and Ethical Issues Of Genetic Engineering Harmful organisms may be accidentally produced Organisms that are released into the environment may be engineered with genes that will eventually kill them There is currently little legislation on the use of genetic screening and the use of information produced by screening; could result in discrimination Social and Ethical Issues Of Genetic Engineering This technology is increasing the ability to diagnose genetic diseases pre-natally, adding new complexity to the abortion controversy Ethical questions have been raised over whether we should modify the genes of humans Genetic screening and gene therapy are expensive and may be unavailable to the poor Social and Ethical Issues Of Genetic Engineering Biological weapons could be created using biotechnology The debate over stem cells would fall into this category as well as cloning – limited legislation already exists DNA Fingerprinting Facts: There are over 10 trillion cells in your body Every cell has the same DNA inside There are over 3 billion base pairs in your DNA Your DNA is spread over 46 chromosomes Your DNA is unique to you! (Unless you have an identical twin) How to make a DNA fingerprint: 1. Pour restriction enzymes into DNA 2. Separate DNA fragments using an agarose gel (small pieces will move farther) using an electrical current 3. Add probes for certain DNA Markers 4. Create an x-ray film of your results called an Autoradiograph What do you end up with? A film with bands on it that represent the different fragment lengths of DNA. The bands show where the probes attached themselves to the DNA. What are DNA Fingerprints Used For? Criminal Cases (Murder, Rape, Etc.) Paternity cases (Who's yo daddy?) Free wrongly incarcerated inmates Create DNA Profiles Construct Genetic Databases (Convicted felons) History 1996 Dr. Ian Wilmut - first to successfully clone an adult mammal “Dolly” the sheep: born 1996, died (euthanized) Feb. 14, 2003 Named after Dolly Parton (donor cell was taken from an adult mammary gland) How the Process Works 1. Take a donor cell from an adult. 2. Starve the cell of nutrients and it will become dormant. 3. Remove an unfertilized egg cell from a female. 4. Replace the nucleus of the unfertilized egg cell with the nucleus of the adult donor cell. How the Process Works 5. “Trick” the egg cell into thinking that it was fertilized naturally (electric shock works well). 6. The egg will now grow and divide (mitosis) to form an embryo. 7. Implant the dividing egg cell into a surrogate mother. How the Process Works 8. Wait out the normal gestation period. 9. At the completion of the pregnancy, the organism that is born will have the same DNA as the original donor. Problems So Far / What we’ve Learned Dolly only lived 7 years, less than 1/2 the normal life expectancy Dolly developed early onset arthritis Successful cloning has a high failure rate Telomere = found at the tips of chromosomes Significance of the Telomere It gets shorter every time the DNA replicates before Mitosis Acts as a “Biological Clock” When the telomere is gone the cell no longer divides An enzyme called telomerase is responsible for the eating away of the telomere Possible Medical Applications Organ and tissue transplants Taking a specialized cell and turning it into any tissue or organ you want Genetically resistant foods (Bananas) Stem Cells What are human embryonic stem cells? Stem cells are cells that have the remarkable potential to develop into many different cell types in the body. The two categories of stem cells include Embryonic and Adult Stem Cells and possibly a third, cord-blood-derived embryonic-like stem cells (CBEs). Stem Cell Treatment Medical researchers believe that stem cell research has the potential to change the face of human disease. Medical researchers anticipate being able to use technologies derived from stem cell research to treat Cancer, Parkinson’s Disease, Spinal Cord Injuries, and muscle damage. The Controversy There exists a widespread controversy over stem cell research that emanates from the techniques used in the creation and usage of stem cells. Embryonic Stem Cell research is particularly controversial because, with the present state of technology, starting a Stem cell line requires the destruction of a human embryo and/or therapeutic cloning.