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Unit B The Basics of Biotechnology • To manufacture biotech products, we must use organisms (living things) or their components. • Characteristics of all living things: • Use energy • Respond to stimuli • Reproduce • Grow and Develop • Made of Cells Levels of Biological Organization • Cells • Tissues • Organs • Organ systems • Organisms Cells are the basic unit of life A biotechnologist must understand • Biochemistry ( chemistry of living things) • Cytology (cell biology) • Anatomy (structure) • Physiology (function) Types of Cells • Prokaryote No nucleus, no membrane-bound organelles, circular DNA, Single cell, Bacteria only • Eukaryote Membrane-bound nucleus and organelles, can be multicellular Plants, animals, fungi, protists Viruses • Are not made up of cells • Not living • Protein coat with DNA or RNA inside the coat • Attaches to cell, injects DNA and uses cell enzymes to copy DNA • Bacteriophage – viruses that infect bacteria Cell Structure Cell wall – gives plant cells shape and external support Cell membrane – controls what enters and leaves the cell Nucleus – controls the activities of the cell Nucleolus – makes ribosomes in the nucleus Ribosomes – makes proteins ER – passageway for proteins Golgi –packages and labels proteins Vesicles - transports materials to cell surface Mitochondria – provides usuable energy for the cell Chloroplast – converts sunlight into chemical energy Vacuoles – stores water Lysosomes – digests materials for the cell Cytoplasm – liquid media of the cell Macromolecules • Cell made up of 75% water • Includes CO2, O2 and salt • Large carbon based molecules - organics • Polymers made of smaller monomer subunits Carbohydrates • Provides energy for the cells and body • Building block of carbs are monosaccharides - “simple sugars” • Monosaccarides – glucose, fructose • Disaccharides – sucrose, lactose • Polysaccharides – starch, cellulose, glycogen • CnH2nOn Lipids • Hydrocarbons – made of carbon and hydrogen atoms • Hydrophobic – insoluble in water • Triglycerides – fats and oils; store energy • Phospholipids – found in cell membranes; also have a hydrophilic end • Steroids – ring structures; found in hormones, venom, and pigments Proteins • Building block is amino acids • Functions: structural (collagen), enzyme (lactase), transport (LDL), contractile (myosin), hormone (insulin), antibody (IgG), pigment (melanin), recognition (CD4), toxins (Botox) • 20 different amino acids • Each amino acid share the same structure except for the R group Nucleic Acids • Two types: DNA and RNA • Holds genetic information • Building blocks are nucleotides • Nucleotides contain a sugar, a phosphate and a nitrogen base • In DNA the sugar is deoxyribose and it is ribose in RNA • In DNA, the bases are A. T, C, and G • In RNA, the bases are A, U, C, and G • DNA is double stranded and RNA is single stranded Enzymes A protein that speeds up a chemical reaction by acting as a catalyst for specific reactions in a living organism Protein Structure Protein binding sites Mechanism of an enzyme Substrate – the molecule with which the enzyme reacts Enzyme Lab What does the enzyme catalase do? Is the enzyme activity of catalase wide-spread or specific? Is the catalase enzyme or its substrate reusable? How does pH affect enzyme activity of catalase? How does temperature affect enzyme activity of catalase? Assignment Read Section 5.3 (pp143-146) and you this information to write your background section for the “Enzyme Lab” in your lab notebook Write the purpose of the lab in your lab notebook With your lab partner, design a set of steps for a procedure to test each of the five questions. Each question will need it own procedure (Part I, Part II, etc) Enzyme Lab What does the enzyme catalase do? Speed up a chemical reaction Is the enzyme activity of catalase wide-spread or specific? Is the catalase enzyme or its substrate reusable? How does pH affect enzyme activity of catalase? Most enzymes work best at pH of 7 How does temperature affect enzyme activity of catalase? Most work best at 37oC The Basics of DNA DNA • Deoxyribose sugar • Phosphate bonds • Nitrogen bases: (A, T, C, and G) • A-T and G-C complementary pairing • Double stranded (helix) • Found only in nucleus Genetic Code • found in the order of the bases • every 3 bases has 64 possible combinations • 3 billion base pairs per cell RNA • ribose sugar • phosphate bonds • bases: A, U, C, and G • single strand • copy of one strand of DNA (except for U instead of T) Transcription • Process of copying RNA from DNA • Copy leaves the nucleus and goes to ribosome • Copy is called messenger RNA (mRNA) • mRNA now has the genetic code also • mRNA carries code in sets of three bases (codons) Translation • Transfer RNA (tRNA) found at the ribosome • tRNA has set of three bases (anticodon) that binds complimentary to the codons on the mRNA • each carries a specific amino acid • 20 different amino acids • sets specific amino acid down at specific spot to make a chain of amino acids (protein or polypeptide) Proteins • are made as the tRNA places the amino acids in a specific order • tRNA is reading the code on the mRNA to determine the amino acid and order • mRNA is a copy of DNA • DNA is ultimate code for the proteins that make us work. • Web 1 • Web 2 Other Web Resources DNA Basics Genetic Diseases Mutations What happens to the proteins, a thus your traits, when the DNA is changed (mutated)? 1. Complete web activity 2. Complete the DNA: Blueprint of Life activity Evaluation To see how well you get this material, answer the scenario A Hairy Situation. Turn in both the DNA: Blueprint of Life and your response to the scenario.