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Abscisic acid and cytokinin metabolism and evolution in microalgae
SUPPLEMENTARY TEXT 1
Current model of the cytokinin and abscisic acid metabolism mechanisms in
Arabidopsis
Cytokinin (CK) biosynthetic pathways CK metabolic pathways can be broadly
classified into two types: the modification of the adenine moiety and that of the side
chain (Sakakibara 2006). The first and rate-limiting step in CK biosynthesis is the
transfer of an isoprenoid moiety to the N6-position of the adenine nucleotide catalyzed
by isopentenyltransferases (IPTs). Plants have two classes of IPTs: ATP/ADP IPTs
(AtIPT1, 3-8) and tRNA IPTs (AtIPT2 and 9). ATP/ADP IPTs are responsible for the
bulk of isopentenyladenine- and tZ-type CK synthesis, whereas tRNA IPTs are
required for cZ-type CK production (Miyawaki et al. 2006). The tRNA IPTs share
homology with adenylate IPTs (35%; versus the 40~60% homology among the
adenylate IPT isoforms) (Takei et al. 2001). AtIPT9 shares the lowest identity with all
other Arabidopsis IPT proteins, while AtIPT2 and ATP/ADP IPTs are closely related
(based on sequence homology). Adenosine kinases (AKs) convert CKs to their
nucleotides and therefore determine the function and compartmentalisation of the
respective CK metabolites. CK hydroxylases CYP735A1 and CYP735A2, which
share 79% identity at the amino acid level, catalyze the biosynthesis of tZ from IP
(Kurakawa et al. 2007, Kuroha et al. 2009, Takei et al. 2004). Cytokinin riboside
5’-monophosphate phosphoribohydrolase (LOG) catalyzes the final step of bioactive
CK synthesis.
Abscisic acid and cytokinin metabolism and evolution in microalgae
Abscisic acid (ABA) biosynthetic pathways Past research has focused on two
possible routes to ABA: (i) a ‘direct’ pathway from farnesyl pyrophosphate (fungal
route) (Siewers et al. 2006), and (ii) an ‘indirect’ pathway via cleavage of a
carotenoid precursor (higher plant route) (Nambara et al. 2005). Through genetic and
biochemical studies, the pathway for ABA biosynthesis in higher plants is now
understood in great detail (Nambara, et al. 2005). In higher plants, the ‘indirect’
pathway via a C40 carotenoid intermediate is the sole formation route to ABA
(Schwartz et al. 2003) (Figure 1). Zeaxanthin is produced as a trans-isomer after
cyclization and hydroxylation of all-trans-lycopene. Conversion of zeaxanthin to
violaxanthin is catalyzed by zeaxanthin epoxidase (ZEP) via the intermediate
antheraxanthin. The following steps consist of the synthesis of cis-isomers of
violaxanthin and neoxanthin catalyzed by ABA deficient 4 (ABA4) (Dall'Osto et al.
2007). The first committed step in ABA synthesis is the cleavage of cis-isomers of
violaxanthin and neoxanthin to a C15 product (xanthoxin) and a C25 metabolite,
catalyzed by 9-cis-epoxycarotenoid dioxygenase (NCED) (Tan et al. 2003). The
conversion of xanthoxin to ABA aldehyde is catalyzed by ABA deficient 2 (ABA2).
The oxidation of the aldehyde to the carboxylic acid is the final step in ABA
biosynthesis, catalyzed by abscisic aldehyde oxidase (AAO) (Schwartz, et al. 2003).
MoCo sulfurase (ABA3), the cofactor required by AAOs, catalyzes the generation of
the sulfurylated form of MoCo (Bittner et al. 2001). In fungi, a ‘direct’ pathway
catalyzed by BcABA1-4 was used for ABA biosynthesis (Siewers, et al. 2006,
Abscisic acid and cytokinin metabolism and evolution in microalgae
Siewers et al. 2004). For example, BcABA3 deletion mutant did not contain any ABA
in grey mold Botrytis cinerea (Siewers, et al. 2006).
Degradation and conjugation
In Arabidopsis, CK degradation requires a
family of CK oxidases/dehydrogenases (CKXs), which removes CK unsaturated
isoprenyl side chains (Ashikari et al. 2005). On the other hand, cytokinins can be
glucosylated to form O-glucosides and N-glucosides. UGT76C1 and UGT76C2
recognize all natural CKs and glucosylates at the N7 and N9 positions, respectively.
UGT85A1, UGT73C5, and UGT73C1 recognize trans-zeatin and dihydrozeatin (both
contain an extra side chain hydroxyl group for glucosylation) and form the
O-glucosides (Hou et al. 2004). The major ABA catabolic pathway is triggered by
ABA 8’-hydroxylation which is catalyzed by the cytochrome P450 CYP707A family.
In addition, the conjugation of ABA with Glc is performed by ABA
glucosyltransferase (UGT71B6) (Xu et al. 2012). On the other hand, the one-step
hydrolysis of Glc-conjugated ABA (ABA-GE) by a -glucosidase (BG1) plays
important roles in ABA turnover.
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