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Bringing an Ag Biotech Seed Product to Market Laura Privalle, Ph.D. April 14, 2015 1 Agenda/ Content Bringing an agbiotech product to market Possibilities vs. realities What have we learned? Summary 2 Biotechnology is an Extension of Traditional Plant Breeding TRADITIONAL PLANT BREEDING Many genes are transferred Desired Gene X Commercial Plant Variety Donor Plant New Plant Variety PLANT BIOTECHNOLOGY A single gene is transferred Desired Gene Desired Gene Donor 3 + Commercial Plant Variety Improved Commercial Plant Variety PRODUCT DEVELOPMENHT 4 Phase 0 DISCOVERY PHASE – Product concept and gene discovery Phase I PROOF OF CONCEPT – Transformation and optimization Phase II EARLY DEVELOPMENT – Elite event identification Phase III ADVANCED DEVELOPMENT – Regulatory approval Phase IV LAUNCH – Product introduction and life cycle management Product Concept Scientifically what is possible Single Gene • Phenotype Herbicide tolerance: • Modified mode of action (i.e., CP4 EPSPS) • Herbicide detoxifier (i.e., PAT) • Insect Resistance: • Cry proteins • Vip proteins • Disease resistance More Complex Traits • Metabolic pathways • Yield enhancement • Nutrient enhancement 5 Critical Steps in Transformation • Getting the gene into the plant genome • Getting the plant cell to turn into a plant… • …That expresses the gene • Getting a transformed plant to be fertile • Getting the progeny to express the phenotype… • …Without yield drag 6 DOES IT WORK EVERYTIME? NO!!!! Why Not? 7 WHAT CAN GO WRONG? Idea is bad Trait is complex Gene is not expressed Gene is inserted in a poor location • Harms plant (does not survive through tissue culture) • Impacts plant metabolism • Impacts plant phenotype • Impacts plant fertility Not inherited in a Mendelian fashion Yield Drag 8 It’s a numbers game – start BIG Many ideas to get the RIGHT one Many cells transformed to get multiple events Many events evaluated to get THE RIGHT One 9 $ http:www.croplife.org/PhillipsMcDougall Study DISCOVERY Gene/Trait Identification AVERAGE DURATION1 Mean units Tested Regulatory Activities 10 PHASE I Proof Of Concept PHASE II Early Development PHASE III Advanced Development PHASE IV Pre-launch 53.9 MONTHS 27 MONTHS 30 MONTHS 37.2 MONTHS 48.8 MONTHS 10209 511 1302 2 1 In silico screening Preliminary Digestive Fate Molecular Characterization Full Regulatory Study Package Data Defense Many Ideas Don’t Make it Past the Discovery Stage – Regulators never see X 10 – 15% don’t pass allergen/toxin homology bioinformatics screen X May not be expressed in planta X No efficacy X Scientifically feasible, market cannot support • Only the best performers with the correct attributes get promoted • Economics also plays a role • Some products providing good solutions can’t support the cost 11 Is this any different from Conventional Breeding? • 80 -100 crosses are typical (although some breeders make 600). • Similar for all crops. • Utilizing contra-season nurseries, it takes about 6 - 7 years to develop a new cotton, soybean or wheat variety. • Marker assisted breeding can assist in the development of multiple traits at one time. 12 Conventional Breeding continued. • Chemical mutagenesis is useful for simple and single gene traits. Variety development can not start until correctly identified and will take longer than the 6 – 7 years. • Biotech traits (ELITE events) can be incorporated using forward breeding methods or they can be presented as populations in a trait introgression project. 13 Selection of the ELITE Biotech Event Efficacy Agronomic Performance Yield Other agronomic parameters Inheritance pattern Molecular characteristics Single locus Single gene inserted Lack of vector backbone Integrity of insert Stability across generations Insertion site 14 How Important is Insertion Site? May play a role in efficacy of trait Determines design of event specific test Impacted by crop genome information available (rice, soy, potato, maize, cotton, tomato, wheat, barley, papaya, sorghum, grape) Important to regulatory agencies in EU, Japan and elsewhere • Interrupted gene • Locus organization – deletion, rearrangement, insertion • Ignores performance – agronomic or composition • Ignores plasticity of plant Over-interpretation, varietal differences? Modern events produced using Agro transformation have fewer insertion issues. 15 15 Plasticity and Ploidy in Plants 16 17 Biolistics vs. Agro transformation • Earliest events used biolistics (or similar brute force transformation) • Transformation using Agrobacterium tumefaciens is more precise 18 Once EVENT identified – Safety assessment conducted. • Safety assessment for plant biotech products is mandatory worldwide • Considers human + animal health as well as environmental safety • Approval only if authorities conclude: Genetically optimized plant is as safe as a conventionally bred plant 19 Safety Assessment is a multi-pronged undertaking Crop Safety Gene / Protein Food / Feed and Environmental Safety Gene(s) Protein(s) Crop Characteristics Food/Feed Composition Environmental Safety 20 20 Most Studied Food – Safety Reviewed by Agencies all Around the World Production Countries 21 Importing countries Comparison of Approvals Country Approvals1 Pending Crops Australia*3 64 Brazil 23 3 Canada*^ 106 17 China 27 5 EU2 50 Japan* 84 8 Korea 64 7 US*4 115 2 51 6 9 9 20 *breeding stacks not regulated ^includes nonGM novel plants 1Most data from http://cera-gmc.org/index.php?action=gm_crop_database&mode=newquery 2Devos et al. Transgenic Res. 2013 3 http://www.foodstandards.gov.au/consumer/gmfood/applications/Pages/default.aspx 4http://www.aphis.usda.gov/biotechnology/petitions_table_pending.shtml 22 What we have learned TERMINATED BEFORE Approvals sought x Brazilnut protein to increase methionine content in soybean x Bean amylase inhibitor in pea $ Many vegetable examples x Amylose potato x Nutritionally enhanced tomato WITHDRAWN after approval x High lysine maize $ Triffid Flax x Amflora potato $ NewLeaf Plus® x Maximizer Bt176 23 Once Approved – Consumers may never see product – or not for long • Demand for the FLAVR SAVR tomato was high and remained high, but the product was never profitable (because it wasn’t in the right varieties) the right varieties.. 24 25 Summary • It takes a lot of effort to produce the single ELITE event (not unlike plant breeding) • Evaluation of plant performance eliminates events in which the insertion site was detrimental (not unlike plant breeding) THUS REGULATORS NEVER SEE THEM • The structure of the insert is an important factor in elite event selection • Characterization of the insert is an element of a dossier • Reviewers around the world evaluate the safety packages – most highly studied food/feed consumed • Many products fail due to issues NOT associated with safety 26 No product has been withdrawn or not approved due to an unintended effect related to insertion into the genome. 27 Thank you!