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GENETIC OUTCOMES reflect In a monastery garden, a curious monk discovered some of the basic principles of genetics. The work of the monk, Gregor Mendel, laid the groundwork for the study of genetics, which has advanced our understanding of many related areas of science including the genetics of certain diseases and the process of selective breeding. Scientists have built upon the discoveries of Mendel, answering some important questions including, why do organisms look and act the way they do? genetics: the study of how traits are passed from parents to offspring Why do offspring resemble their parents? What role can technology play in genetics? Let’s explore the answers to these questions. Genotypes, Phenotypes, and Punnett Squares An organism’s traits can be predicted based on its parents’ traits. Mendel conducted breeding experiments with pea plants and concluded that some characters are determined by two factors. For example, the peas he worked with could have either a smooth texture or a wrinkled texture. These different values for the texture character are called traits. Traits are determined by alleles, which are different versions of a gene. Offspring inherit one allele from each parent in sexual reproduction. The combination of the two alleles is the offspring’s genotype and determines what trait the organism will have for a character. In Mendelian genetics two letters, such as Ss (one letter for each allele) represent genotypes. A capital letter means the allele is dominant. A lowercase letter means the allele is recessive. One possible genotype for the texture of the peas in Mendel’s breeding experiments was Ss, meaning that the offspring could have inherited one dominant allele and one recessive allele. Smooth texture (S) is dominant and wrinkled texture (s) is recessive. A pea plant with the genotype Ss has smooth peas because the dominant allele masks the recessive one. The smooth texture is the phenotype. The phenotype is the physical expression of the alleles. It is the outward appearance of the genotype. So, a pea with a genotype SS will also have smooth peas, but a pea with the genotype ss will express the recessive trait, wrinkled peas. When the genotypes of two parents are known, it is possible to predict the genotypes and resulting phenotypes of the offspring. A Punnett square is used to find and analyze the possible gene combinations of the offspring. © 2013-2014 Accelerate Learning - All Rights Reserved 1 GENETIC OUTCOMES The Punnett square on the right shows a monohybrid cross for a single trait represented by a blue A for the dominant allele and a purple a for the recessive allele. In this monohybrid cross, the parents have one of each allele for the trait, allowing us to examine all possible combinations of the alleles. Therefore, the parents are both heterozygous, meaning that each parent has two different forms of an allele for a particular trait. Their genotypes are written across the top and down the side of the Punnett square. The genotypes inside the squares represent the possible allele combinations for the offspring. Notice that two possible genotypes in the offspring are homozygous, meaning that they have two of the same forms of an allele for a particular trait: AA and aa. In this Punnett Square, the offspring have a 75% chance (3 out of 4) of expressing the dominant trait and a 25% chance (1 out of 4) of expressing the recessive trait. Mendelian genetic crosses include dihybrid crosses as well. A dihybrid cross examines the possible inheritance of two specific sets of alleles. The Punnett square below shows the possible genotypes and their frequencies for a trait represented by the letter A (a for the recessive form) and a trait represented by the letter B (b for the recessive form). © 2013-2014 Accelerate Learning - All Rights Reserved 2 GENETIC OUTCOMES what do you think? For the dihybrid cross on the previous page, calculate the frequency of each phenotype. For example, combinations containing at least one A and one B appear 9 out of 16 times, giving offspring a 56% probability of expressing both dominant traits. What is the probability of the offspring expressing both recessive traits? Non-Mendelian Genetic Crosses Geneticists soon discovered that some traits do not follow Mendel’s patterns of inheritance. These non-Mendelian traits include phenotypes that are coded by multiple alleles or do not follow the normal rules of dominance. Some alleles display co-dominance in which a heterozygous genotype results in both traits being expressed in the phenotype. Erminette chicken feathers display co-dominance. A chicken that has one allele for black feathers and another allele for white feathers displays both black and white feathers. Another type of non-Mendelian genetics is incomplete dominance. In this case, a heterozygous genotype results in a blend of the two traits. For example, a certain breed of snapdragon plant produces white flowers and red flowers. When they are crossed, a heterozygous offspring is produced with a third phenotype: pink flowers. Incomplete dominance is popular when breeding plants and animals in order to obtain a blend of desired traits. what do you think? Some flowers exhibit co-dominance. Predict what the offspring of a red flower and a white flower would look like if they followed a co-dominant pattern of inheritance. Meiosis and Genetic Variation Meiosis increases genetic variation in organisms that mitosis: a form of cell undergo sexual reproduction. Meiosis is similar to mitosis in division in which the that chromosomes replicate and divide into daughter cells. material from the cell However, during meiosis, cells undergo two divisions nucleus divides (meiosis I and II) resulting in daughter cells with half the number of chromosomes as the parent cell, which is called haploid. These cells are the gametes, or sex cells, referred to as sperm and egg. When eukaryotes reproduce sexually, the gametes from each parent join together. The two haploid cells combine, giving the offspring a complete set of chromosomes, which is called diploid. Sexual reproduction creates greater genetic variety in two ways. First, an offspring inherits DNA from both of eukaryote: organism with a membranebound nucleus that contains DNA © 2013-2014 Accelerate Learning - All Rights Reserved 3 GENETIC OUTCOMES its parents. This causes new random combinations of alleles, resulting in a variety of traits that differ from the mother and the father. Since genes are randomly assorted when they are passed to offspring, even two siblings have different combinations of genes and traits from the same set of parents. Only identical twins have exactly the same DNA. Meiosis also contributes to genetic variation through crossing over. During one phase of meiosis, homologous chromosomes—pairs of chromosomes containing the same genes, but possibly different alleles—line up at the center of the cell. When this happens, sections of the homologous chromosomes can cross over and switch position from one chromosome to the other. This results in a reshuffling of genes on the individual chromosomes, which provides an even greater variety of genetic combinations that can be passed on to offspring. Crossing over during meiosis I in the cells shown here resulted in sections of the two homologous chromosomes switching places. look out! Sexual reproduction is beneficial to organisms because it increases genetic variation, but asexual reproduction has advantages as well. In asexual reproduction, a single parent produces offspring that are genetically identical to the prokaryote: simple parent and to one another. This type of reproduction is organism that does not have mostly associated with prokaryotes. Other simple life a membrane-bound nucleus forms such as the hydra and sponge may reproduce or other organelles; most sexually or asexually at various stages of their lives. are unicellular Although genetic variation is compromised in asexual reproduction, there are benefits to the parent organism. Animals that are immobile, such as sponges, would have great difficulty finding a mate. Asexual reproduction allows them to produce offspring without having to travel. Another advantage is that in asexual reproduction the parent expends much less energy compared to sexual reproduction. This allows organisms to produce many offspring without greatly taxing their energy or time. Finally, in a stable environment, asexual reproduction produces offspring with the necessary genetic traits to survive and A bud, or offspring, grows thrive in their environment. out of the left side of this hydra. What do you know about the bud’s genetic make-up? © 2013-2014 Accelerate Learning - All Rights Reserved 4 GENETIC OUTCOMES Discover Science: Mapping the Human Genome and Other Genetic Technology Identifying 25,000 genes and sequencing 3 billion base pairs genome: all of the of the human genome is no simple task. But in 2003, after hereditary information 13 years of research by scientists in more than 18 countries, within an organism the Human Genome Project was completed. In addition to identifying and sequencing all of the genetic material, the Project’s goals included creating a database to store the information, improving the tools used for analyzing the data, sharing the technology with companies who could further the research, and addressing the ethical issues involved with advancements in genetics. Although the Project has been completed, analyzing the data and applying it will continue for many years to come. There are a variety of techniques that are used to study the genomes or smaller sections of genetic information in organisms. • Gel electrophoresis: One of the most popular DNA technologies is gel electrophoresis, in which sections of DNA are sliced into differently sized fragments and placed in a gel-covered plate. An electric current is passed through the gel, causing the fragments to separate according to size. Gel electrophoresis is commonly used in DNA fingerprinting to determine the degree to which two samples of DNA are related based on the number of matching fragments in their patterns. • Recombinant DNA technology: DNA can be altered to produce desirable proteins through recombinant DNA. Small sections of DNA called plasmids containing desired genes are inserted into host bacterial cells. As the bacteria undergoes protein synthesis, the inserted genes are translated right along with the host’s own DNA. This technology is used to study genetic disorders and to explore the possibility of using recombinant DNA to replace mutated genes. • DNA and RNA probes: Chosen segments of genetic material are used to label specific nucleic-acid sequences. These labels can then be followed and examined in more complex genetic processes and sequences. Nucleic acid probes are often used during experiments in order to conduct a chromosomal analysis. © 2013-2014 Accelerate Learning - All Rights Reserved 5 GENETIC OUTCOMES • Bioinformatics: This field of science combines genetics and computer technology to store, analyze, and model the wealth of information held within the nucleotide sequences of genetic material. Since DNA is so small, yet so complex, bioinformatics allows scientists to gain insight into the functions and changes of genetic material through computations. • Karyotyping: This technology provides a picture of an organism’s chromosomes allowing for visual analysis. The karyotype, or chromosomal image, can show genetic abnormalities and can be used to diagnose genetic disorders. What Do You Know? Genetic outcomes are the result of combining chromosomes from two different parents who reproduce sexually. The processes that take place during meiosis help contribute to genetic variation among offspring. Use what you have learned about genetic outcomes and Punnett squares to solve the following mystery. The human karyotype above appears to be normal, illustrating 23 pairs of chromosomes. Abnormal karyotypes might show a missing, an extra, or a fragmented chromosome. A newborn child was brought to the hospital nursery before he was marked with his parents’ names. The hospital workers must use what they know about genetic outcomes to determine whom the child belongs to. They use his traits to help them. The baby has freckles (F dominant), and attached earlobes (l recessive). They believe that the baby most likely belongs to a couple in which the man has attached earlobes but no freckles. It is known that the woman is heterozygous for freckles and earlobe type. Complete the Punnett square on the next page to determine the probability that the child belongs to this couple. List the possible combinations of the father’s alleles across the top and the possible combinations of the woman’s alleles down the left side. Then write your answer in the space below. Include a brief statement explaining how you reached your answer. © 2013-2014 Accelerate Learning - All Rights Reserved 6 GENETIC OUTCOMES Write your answer here: fl fl fl fl FL Fl fL fl To be more certain, the hospital workers performed a gel electrophoresis comparing the DNA from four fathers against the baby’s DNA shown in column A. The results are shown below with the four fathers’ DNA labeled B, C, D, and E. According to the data in the gel, which sample most likely belongs to the baby’s father? Write your answer in the space provided and include an explanation. © 2013-2014 Accelerate Learning - All Rights Reserved 7 GENETIC OUTCOMES connecting with your child Studying a Genetic Disease To help students learn more about genetic outcomes, have your child create an informational brochure about a genetic disease. Begin by conducting online research to find a list of the more commonly known genetic diseases and have your child choose one of them to research further. Instruct your child to gather specific information about the disease such as its symptoms, management, potential cures, and the type of chromosomal abnormality that causes the disease. Have your child organize the information in a colorful trifold brochure that might be distributed in a doctor’s office or by a health organization. Make sure two Punnett squares are included in the brochure to illustrate the chances that a child will inherit the disease if one parent carries the disease and if both parents carry the disease. Here are some questions to discuss with students: • What causes the disease in your brochure? • How can doctors use what they know about the disease to counsel couples that want to have children, knowing that one or both of them carry an allele for the disease? • What technologies are under development regarding the treatments and/or cures for the disease? © 2013-2014 Accelerate Learning - All Rights Reserved 8