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Module 4 Respiration 1.4.5. LINK REACTION AND KREBS CYCLE Starter Complete Glycolysis summary sheet Learning Outcomes Outline the link reaction, with reference to decarboxylation of pyruvate to acetate and the reduction of NAD Explain that coenzyme A carries acetate from the link reaction to Krebs cycle Describe the conversion of citrate to oxaloacetate Outline the Krebs cycle, including the roles of NAD and FAD, and substratelevel phosphorylation (Grade A-B) Respiration The process of respiration can be split into 4 stages. 1. Glycolysis 2. Link reaction 3. Krebs Cycle 4. Electron Transport Chain Products of Glycolysis 2 reduced NAD (NADH + H+) 2 Pyruvate 2 ATP The Fate of Pyruvate? THIS DEPENDS ON THE AVAILABILITY OF OXYGEN!!! 18.2 Summary questions 1 Hydrogen is also removed (1); removal of hydrogen oxidises pyruvate (1). 2 Acetyl group (1); carbon dioxide (1) 3 Pyruvate (1); acetyl CoA (1); reduced NAD (1); 4 Enzymes required are in cytoplasm/ORA (1); glucose molecule too large to move into mitochondrion (1); no transport proteins for pyruvate (1); mitochondria not originally present in (eukaryotic) cells (1). The fate of pyruvate 8 of 39 © Boardworks Ltd 2009 Aerobic Respiration If O2 is present 3C pyruvate passes into mitochondria. Here it is completely oxidised forming CO2 and H2O. The second stage of aerobic respiration is the link reaction. The Link Reaction Cytoplasm Mitochondria The Link reaction Glycolysis The Krebs Cycle Links Glycolysis to the Krebs Cycle. The end product of the link reaction can enter the Krebs Cycle. Link Reaction sequence NAD+ NADH + H+ Acetate (2C) Pyruvate (3C) Coenzyme A Acetyl coenzyme A (2C) CO2 Coenzyme A now combines with the The Pyruvate is decarboxylated (CO2) to form Start with Pyruvate produced in Acetate Glycolysis This produces Acetate Acetyl coenzyme It is also dehydrogenated (H+Aremoved) The Acetyl coenzyme A now enters Krebs cycle Link Reaction Pyruvate decarboxylase removes a carboxyl group from pyruvate in the form of CO2. Pyruvate removes pyruvate Pyruvate(3C) dehydrogenase H atoms from The remaining 2-carbon molecule combines with coenzyme A to produce acetylcoenzyme A (acetyl CoA). Another oxidation reaction occurs when NAD+ collects hydrogen ions. This forms reduced NAD (NADH + H+) Decarboxylation CO2 (1C) Oxidation Coenzyme (CoA) NAD+ Reduction NADH + H+ Acetyl CoA (2C) Task Write a summary equation for the link reaction Overall equation for one link reaction and Krebs cycle: Pyruvate + NAD + CoA acetyl CoA + reduced NAD + CO2 The Products of the Link Reaction go to the Krebs Cycle (takes place in matrix) So for each glucose molecule: (6C was split into 2x3C) 2 acetylcoenzyme A (go into the Krebs cycle) 2 Carbon dioxide (released as a waste products) 2 Reduced NAD (go to the electron transport chain) Krebs cycle – metabolic Each step in the cycle requires enzymes to reduce the activation energy. The reactions all take place in the matrix of the mitochondria and are usually represented as a circular diagram. cycle Oxaloacetate Acetate 2C Citrate The Krebs Cycle Acetyl Coenzyme A (2C) Coenzyme A Acetate 2C Oxaloacetate (4C) FAD (4C) (4C) Citrate (6C) (6C) NAD CO2 Reduced FAD (4C) Reduced NAD (5C) (4C) DeNa DeNa A Fa... Na This little tune will help you to remember the Krebs Cycle. Remember, respiration is all about releasing energy from your food. Oxidation releases energy. When a carbon compound is oxidised, coenzymes are reduced. The coenzymes involved are: NAD and FAD. Carboxylation is the removal of CO2. Remember this: 665 and five 4’s. DENA DENA A FA... NA DENA: Decarboxylation and production of reduced NAD DENA: Decarboxylation and production of reduced NAD A: Production FA... : Production NA: Production of ATP of reduced FAD (The ‘...’ means a gap) of reduced NAD Oxaloacetate citrate DENA NA FA DENA A Krebs cycle DENA Acetyl CoA joins with the C4(oxaloacetate) group CoA is released to transport more pyruvate into the matrix A C6 fragment is formed (citrate) C6 (citrate) is oxidatively decarboxylated. A C5 group is formed. The carbon is given off as carbon dioxide NAD+ is reduced to NADH + H+ Krebs cycle The C5 fragment is oxidised and decarboxylated further to a C4 compound. Again the carbon removed forms carbon dioxide. A further NAD+ is reduced to NADH + H+. DENA Krebs cycle The final stage in the cycle has the C4 (oxaloacetate) acceptor regenerated. ADP is reduced to ATP A (by phosphate from an intermediate compound – so SLP) FAD (Coenzyme)is reduced to FADH2 . FA There is a reduction of NAD+ to NADH + H+. NA Krebs Cycle Summary Each Acetyl CoA entering the cycle results in: 1. 2 CO2 molecules 2. 1 ATP molecule (S.L.P) 3. 8 pairs of H atoms (Later used in the E.T.C to produce ATP) Used to reduce NAD and FAD. Three reduced NAD are produced and 1 reduced FAD per cycle. 4. NAD = Nicotinamide adenine dinucleotide FAD = Flavine adenine dinucleotide Importance of the Krebs cycle 1) Breaks down macromolecules into smaller ones 2) Produces H atoms that are carried by NAD to ETC for oxidative phosphorylation, to produce ATP. 3) Regenerates 4 –carbon molecule that combines with acetylcoenzyme A, which would otherwise accumulate. 4) Source of intermediate compounds used by cells in the manufactures of other important substances such as fatty acids, amino acids and chlorophyll 18.3 Summary questions 1 ATP – three phosphate groups (1); one ribose (1); one nitrogenous base (1); NAD – two phosphate groups (1); two riboses (1); two nitrogenous bases (1) (max 3 comparisons) 2 Idea that it is used to link reactions (1); idea that energy is released as a result of the activity of one enzyme and used by another enzyme (1). 3 Students answers may vary but must include: glucose to triose phosphate (1); triose phosphate to pyruvate (1); addition of two ATP (1); production of four ATP and two reduced NAD (1) (2 max). 4 One per turn (1) two in total (1) 18.3 Summary questions 5 Hydrogen needs to be removed for cycle to continue (1); hydrogen removed using NAD/FAD and reduced (1), then NAD/FAD are oxidised at electron transport chain (1); oxygen required for electron transport (1). 6 Enzymes are specific (1); active site complementary to substrate (1); different steps have different substrates (1); different steps require different enzymes (1); different enzymes (may) require different coenzymes (1); only one step in cycle has enzyme which requires FAD coenzyme (1). Plenary - Summary Table Product from one Krebs cycle Where it goes 1 coenzyme A Reused in next link reaction Oxaloacetate Regenerated for next Krebs cycle 2 carbon dioxide Released as waste product 1 ATP Used for energy 3 reduced NAD To oxidative phosphorylation 1 reduced FAD To oxidative phosphorylation Remember – the Krebs Cycle happens TWICE per glucose molecule. If 6 glucose molecules were respired – how much carbon dioxide would be produced? 24 Krebs cycle 31 of 39 © Boardworks Ltd 2009 Counting carbons 32 of 39 © Boardworks Ltd 2009