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Updated Honors Biology Midterm Review Guide: 2012-13 The Cell 1. What is the difference between a plant and animal cell. 2. What is the difference between a prokaryote and eukaryote cell 3. Why is the phospholipid bilayer important – what is it composed of, vesicle formation 4. Diffusion- which way do particles move in an experiment a. Define diffusion b. What happens at equilibrium c. Define Osmosis 5. Lab safety- no question be familiar with class rules for 6. What is the structure (look like) and function of following parts of cell a. Nucleus g. Cilia b. Nucleolus h. Flagella c. Endoplasmic Reticulum i. Mitochondria d. Cell wall j. Central vacuole e. Ribosomes k. Chloroplast f. Golgi Apparatus 7. What are the principles of cell theory- possible essay 8. How should one look at a slide on the microscope at high power 9. Lab practical- Be able to locate, draw, and label a cell on high power. Photosynthesis & Cellular Respiration 1. Define and give and example of: autotroph, heterotroph, consumer, producer 2. What types of energy conversion occur in photosynthesis 3. Plants absorb light by? and appear green because of? 4. Experiment a. Define the independent variable & dependent variable b. Be able to read a graph- no question c. What Gas is released by photosynthesis 5. What are the equations for photosynthesis and cellular respiration? How are they similar yet different? 6. How is energy released in ATP? 7. What are the products and reactants of cellular respiration 8. Yeast and fermentation – what type aerobic or anaerobic? 9. How do muscle cramps develop? 10. What foods are made from fermentation? 11. Comparison of light reaction and Calvin Cycle: light use, location, reactants, products, and energy types 12. Comparison of Glycolysis, Krebs cycle, Electron transport chain, & fermentation (2 types): # ATP, location, need for oxygen, produces carbon dioxide 13. Write the balanced chemical equations for photosynthesis & cell respiration- possible essay Chemistry 1. What is the atomic number? Atomic weight? An isotope? An ion? 2. Calculate the number of protons, neutrons, and electrons based on the periodic table. a. What are the number of protons, electrons and neutrons in Magnesium and Chlorine? 3. What are the number of electron cloud layers and how many electrons are in each? a. Draw electron cloud configuration for Magnesium and Chlorine. 4. Identify the reactants and products in a chemical equation 5. 6. 7. 8. What is the difference between an ionic and covalent bond? Give an example of each. What is pH? How does what know if a substance is an acid or base or neutral? Identify which functional groups are present for a given molecule. For carbohydrates, fats, and proteins be able to a. Identify the monomers for each? How does the molecule progress to be a polymer? b. How does dehydration synthesis work to build a polymer of each group? c. How does hydrolysis work to break down the polymer of each group? d. What are the different functions of each group? e. Which and how are these groups listed on a food label. 9. What are the different forms and functions of polysaccharides: glycogen, starch, cellulose 10. How can you tell the difference between saturated, monounsaturated, and polyunsaturated fats. 11. What are the 4 types of protein structures? What mechanisms are in place to cause the shape at each level. 12. Interpret a graph on the effects of an enzyme 13. Explain the induced fit model – such as sucrase on sucrose- possible essay question. 14. How does denaturation occur and affect enzymes. Ecology 1. Food web /pyramids a. Define the types of organisms- producers, consumers, decomposers, omnivores b. What will happen to other organisms if the food web is disrupted c. Define producer, 1st, 2nd or 3rd order consumers d. What is the difference between abiotic and biotic factors- examples e. Be able to read pyramid of numbers and energy- how is energy flow represented through a food chain / web-possible essay question 2. Human population growth a. Graphs: Draw and explain J-shape / exponential, S-shape / carrying capacity b. What are causes for rapid human growth in last 150 years 3. Symbiosis: define and examples of commensalism, mutualism, parasitism, predator-prey 4. Human disturbances a. Define: Ozone layer depletion, biological magnification b. Define: Acid rain, deforestation 5. Ecological succession: primary v. secondary – what is the difference 6. Population Community Ecosystem Biome: define each in relations to one another 7. Calculate density of a population- what is the formula 8. Conservation a. What methods are used to increase biodiversity and protect endangered species b. What are threats to biodiversity 9. Path of energy in living things- Comes from where and goes through life how? 10. Chemical cycles: Carbon, nitrogen, and water- what does each do? 11. What is the difference between abiotic and biotic. Give examples of each. 12. For each of the following biomes be able to describe general characteristics of each: Desert, Tundra, Coniferous forest (taiga), Temperate deciduous forest, grassland, tropical rain forest. Create a table on your paper as below and complete for all listed biomes. Biome Water Temperature Soil Plants Animals Word Parts for Honors Biology Midterm Part a aerosan- Meaning without air, oxygen without Vocabulary abiotic aerobic anaerobic -ase autobiocarnis, caro chlorochroma, chromo -cyte, cytode- enzyme self life flesh sucrase autotroph biosphere carnivore green color diendo- two inner, inside true outside plant other, different water over, more under, less equal nucleus study of to loosen, cut euexoherba heterohydrohyperhypoisokaryo-logy lysis cell from Part magna Meaning big,large Vocabulary magnify micromonoomni -ose small one all sugar microscope monomer omnivore glucose -philic love hydrophilic chloroplast chromatograph y cytoplasm dehydration synthesis disaccharide endocytosis -phobic photo- fear light hydrophobic photosynthesis phyllon -phyto- leaf plant chlorophyll phytoplankton plasm-, -plasm poly- forming, liquid many cytoplasm polysaccharide eukaryotic exocytosis herbivore heterotroph primos, pro-sacchar stoma first before sugar mouth primary consumer prokaryote monosaccharide stomata hydrolysis hypertonic hypotonic isotonic karyotype biology lysosome syn- together ATP synthase transtri-, trestroph vacuos vorare across three feeding, nutrition empty devour transport triphosphate trophic level vacuole omnivore Essays 1. Explain the three parts of the cell theory and explain why it is important to biology? 2. Compare & contrast the photosynthesis equation with the cellular respiration equation. 3. Apply the induced-fit model of enzymes and substrates to sucrose / sucrase. How does denaturing affect an enzymatic reaction. 4. Trace the path and amount of energy (including % loss) from the sun to a quarternary level consumer in a food chain. Lab Practical 1. Be able to locate, draw, and label a cell using a microscope on high power – not part of exam this year. You will do before exam. Honors Biology Midterm Review Guide: 2012-13 ANSWERS The Cell 1. What is the difference between a plant and animal cell Plant Animal Membrane and cell wall Plasma membrane Mitochondria and chloroplast Mitochondria Cytoplasm, nucleus Cytoplasm, nucleus Most organelles Most organelles 1. What is the difference between a prokaryote and eukaryote cell – prokaryotic lacks a nucleus and most other organelles - eukaryotic cell has a membrane bound nucleus and organelles 2. Why is the phospholipid bilayer important- regulates the transport of substances across it, hydrophilic heads and hydrophobic tails, transport ptoteins. Oxygen and water diffuse, glucose by proteins. Exocytosis / endocytosis- moving material out or into cell by vesicless made of membrane 3. Diffusion- which way do particles move in an experiment a. Define diffusion- net movement of the particles of a substance from where they are more concentrated to where they are less concentrated b. What happens at equilibrium- reached when the movement of particles in one direction is equal to the number of particles moving in the other c. Define osmosis- passive transport of water across a selectively permeable membrane 4. Lab safety- be familiar with class rules for: fire use, acid use, glass breakage 5. What is the structure (look like) and function of following parts of cell a. Nucleus: center of cell, circular; the part that houses the cell's genetic material in the form of DNA b. Nucleolus: ball-like mass of fibers and granules in a cell nucleus c. Endoplasmic Reticulum: may be smooth or rough ribbon-like; network of membranes within a cell's cytoplasm that produces a variety of molecules d. Cell wall: box like structure; strong wall outside a plant cell's plasma membrane that protects the cell and maintains its shape e. Ribosomes: small dot structures- cluster of proteins and nucleic acids that constructs proteins in a cell f. Golgi apparatus: flattened stack of ovals; cellular organelle that modifies, stores, and routes cell products g. Cilia: short hair-like structures from a cell and containing bundles of microtubules that move a cell through its surroundings or move fluid over the cell's surface h. Flagella: whip-like structure responsible for movement i. Mitochondria: powerplant of cell- turns glucose into ATP; bean shaped j. Central vacuole: large structure (bigger than nucleus) stores water to help hold plants up k. Chloroplast: green disk structure responsible to turn solar energy into glucose 7. What are the principles of cell theory - All living things are composed of cells, cells are the basic unit of structure and function in living things (life legos), cells come from pre-existing cells 8. How should one look at a slide on the microscope at high power: set in on low power and find the object, go to medium and then high keeping the organism in the center of the field of view, only use the fine adjustment on high power. Chemistry 1. What is the atomic number? Atomic weight? An isotope? An ion? Atomic number is the number of protons in an element – it is its identity. Atomic mass is the number of protons and neutrons in an element. Isotope is form of an element that weighs more due to more neutrons. Ion is either a positively or negatively charged element / compound due to gaining or losing electrons. 2. Calculate the number of protons, neutrons, and electrons based on the periodic table. The number of protons is the atomic number. The number of electrons of an element on the periodic table is the atomic number. Neutrons are calculated by the atomic mass minus the atomic number. a. What are the number of protons, electrons and neutrons in Carbon & Chlorine? Carbon: 6 protons, 6 electrons, 6 neutrons Chlorine: 17 electrons, 17 protons, 18 neutrons 3. What are the number of electron cloud layers and how many electrons are in each? Each row of the periodic table is the number of layers in the electron cloud. Each column (up and down) is the number of electrons in the outer most layer. a. Draw electron cloud configuration for Magnesium and Chlorine 4. Identify the reactants and products in a chemical equation- reactans are on the left side of the equation and products are on the right side. Hydrogen and oxygen are reactants that make water. H2 + O2 H2O 5. What is the difference between an ionic and covalent bond? Give an example of each. Ionic bonds are made when an electron leaves the outer layer of one element and goes to another element – creating two ions. The atoms attract due to opposite charge like salt Na+ and Cl-. Covalent bonds are when elements share the electrons in the outermost layer like H2O. 6. What is pH? How does what know if a substance is an acid or base or neutral? pH is the measure of H+ ion concentration in a solution. Scale 0-14. Less than 7 acid, greater than 7 base. & is considered neutral or pure water. 7. Identify which functional groups are present for a given molecule. Hydroxyl Carboxyl Amino Aldehyde Ketone phosphate nitrogen lone pair 8. For carbohydrates, fats, and proteins be able to a. Identify the monomers for each? How does the molecule progress to be a polymer? b. How does dehydration synthesis work to build a polymer of each group? c. How does hydrolysis work to break down the polymer of each group? d. What are the different functions of each group? e. Which and how are these groups listed on a food label. Category Carbohydrates Fats Proteins Monosaccharide like Glycerol & fatty acids Amino acids Monomers glucose or fructose triglyceride. polypeptide chains Polymers polysaccharide primary, secondary, tertiary, quarternary Remove 1 water to Remove 3 water Remove 1 water molecule Dehydration make a disaccharide molecules to bind to make a peptide bond synthesis & bonds from 2 glycerol with 3 fatty monosaccharides acids Polysaccarides Triglyceride 4th structure 3rd Hydrolysis (add Monosaccharides Glycerol + 3 fatty structure 2nd water to cut) acids structure polypeptide chain amino acids Sugars, syrups fats, oils meats, legumes Common names/ food 1.Energy for body 1.Stored energy 1.Structures- hair, muscle, Functions 2.Stored energy 2.Cell membranes tissues 2.Hormones & enzymes Carbohydrates, sugars Fats, saturated, Proteins Food Label cholesterol 9. What are the different forms and functions of polysaccharides: glycogen, starch, cellulose Glycogen- branched chain stored energy for glucose Cellulose- structural support in stems of plants Starch- complex sugar food source found in potatoes, rice, and corn 10. How can you tell the difference between saturated, monounsaturated, and polyunsaturated fats. Saturated- have no C=C double bonds and all C are saturated with H atoms. Monounsaturated- have one C=C double bond, and polyunsaturated has two or more C=C bonds. 11. What are the 4 types of protein structures? What mechanisms are in place to cause the shape at each level. Primary- polypeptide; Secondary-alpha helix and beta-pleated sheets; Tertiary- Ionic bonds, sulfur bridges, hydrophobic reactions, hydrogen bonds; Quarternary- multiple amino acids form protein structure. 12. Interpret a graph on the effects of an enzyme-interpretation of graph data 13. Explain the induced fit model – such as sucrase on sucrose- possible essay question. E + S --> ES --> E + P / Sucrase (enzyme) binds to sucrose (substrate) (products) glucose and fructose +sucrase (enzyme) 14. What is denaturation of an enzyme – how does it occur? Protein breaks down and unfolds due to extreme temperature and pH changes. Photosynthesis / Cell Respiration 1. Define and give and example of: -autotroph- organism that makes its own food; plant -heterotroph- organism that obtains food by eating other organisms; animal -consumer- gains energy from eating another organism -producer- an organism that makes its own food and produces organic molecules that serve as food for other organisms in an ecosystem 2. What types of energy conversion occur in photosynthesis: sun light into chemical energy 3. Plants absorb light by?pigments called chlorophyll and appear green because of? Chlorophyll / chloroplast 4. Experiment a. Define the independent variable & dependent variable Independent- the variable being manipulated; dependent- the variable that may change from the independent variable being manipulated b. Be able to read a graph c. What gas is released by photosynthesis: oxygen 5. What are the equations for photosynthesis and cellular respiration? How are they similar yet different? Cell respiration: 6O2 + C6H12O6 6CO2 + 6H2O + 38 ATP Photosynthesis: 6CO2 + 6H2O + Solar Energy 6O2 + C6H12O6 6. How is energy released in ATP? When chemical bonds are broken between phosphates energy is released 7. What are the products and reactants of cellular respiration: in # 5. Products (outputs) are on the right side of chemical equations, reactants (inputs) are on the left side 8. Yeast and fermentation – what type aerobic or anaerobic? Anaerobic because do not need oxygen 9. How do muscle cramps develop? Build up of lactic acid during fermentation in muscles due to lack of oxygen 10. What foods are made from fermentation? Cheese, alcoholic beverages, breads, yogurt. 11. Comparison of light reaction and Calvin Cycle: light use, location, reactants, products, and energy types Light Reaction Calvin Cycle Light use Light-dependent reaction Light-Independent reaction / Dark Reaction Location Thylakoid membrane Stroma Input / Reactant Light + water CO2 + RuP Output / Product Oxygen G3P C6H12O6 Energy NADP+ NADPH 9 ATP 9 ADP + P per turn ADP + P ATP 6 NADPH 6 NADH+ per turn 12. Comparison of Glycolysis, Krebs cycle, Electron transport chain, & fermentation (2 types): # ATP, location, need for oxygen, produces carbon dioxide Glycolysis Krebs Electron transport Fermentation Chain # ATP 2ATP 2ATP 34 ATP 2 ATP Location Cytoplasm Mitochondria Mitochondria Yeast / Muscles Need OxygenNo No Yes No Aerobic CO2 produced No Yes No Yes- alcohol 13. Write the chemical equations for photosynthesis & cell respiration- possible essay Photosynthesis- Carbon dioxide + light + water glucose + oxygen; Cell Respiration- Glucose + oxygen carbon dioxide + water + ATP Ecology 1. Food web /pyramids a. Define the types of organisms- producers, consumers- see #1 photosynthesis decomposers - organism that breaks down wastes and dead organisms omnivores- consumer that eats both producers and consumers b. What will happen to other organisms if the food web is disrupted- decrease or increase other organisms c. Define producer- see photosynthesis #1 1st order consumers- consumer that feeds directly on producers 2nd order consumers- consumer that eats primary consumers 3rd order consumers- consumer that eats secondary consumers d. What is the difference between abiotic- nonliving like rocks, weather and biotic factors- living factors like number of prey e. Be able to read pyramid of numbers and energy- how is energy flow represented- energy decreases as go up orders due to heat loss 2. Human population growth a. Graphs: Draw and explain J-shape / exponential, S-shape / carrying capacity: b. What are causes for rapid human growth in last 150 years: sanitation, medicine, technology 3. Symbiosis- close interaction between species in which one species lives in or on the other and examples of -commensalisms- symbiotic relationship in which one organism benefits, while the other organism is neither harmed nor helped -mutualism- type of symbiotic relationship in which both organisms involved benefit -parasitism- relationship in which a parasitic organism obtains its food at the expense of a host organism -predator-prey- : interaction in which one organism consumes another 4. Human disturbances a. Define: Ozone layer - atmospheric gas (O3) that absorbs ultraviolet radiation, shielding organisms from its damaging effects biological magnification- process by which pollutants become more concentrated in successive trophic levels of a food web b. Define: Acid rain- precipitation that contains nitric and/or sulfuric acids deforestation- clearing of forests for agriculture, lumber, or other uses 5. Ecological succession: primary v. secondary – what is the difference primary succession: process by which a community arises in a virtually lifeless area with no soil secondary succession: change following a disturbance that damages an existing community but leaves the soil intact 6. Population Community Ecosystem Biome: define each in relations to one another 7. Calculate density of a population- what is the formula: # of individuals / sq. area or volume 8. Conservation a. What methods are used to increase biodiversity and protect endangered specieszoned reserve: area of land that is relatively undisturbed by humans and is surrounded by buffer zones that are minimally impacted by humans buffer zone: area of a reserve that is minimally impacted by humans sustainable development: use of natural resources in a way that allows them to renew themselves and be available for the future b. What are threats to biodiversityoverexploitation: practice of harvesting or hunting to such a degree that remaining individuals may not be able to replenish the population 9. Path of energy in living things- Comes from where and goes through life how? Starts with sun then plants then other organisms. The amount of the sun’s energy decreases as go up food chain due to heat loss and mass building. 10. Chemical cycles: Carbon- recycles oxygen and carbon dioxide, nitrogen- places nitrogen from atmosphere into soil and living things and back into atmosphere, water- recycle water in various physical states 11.What is the difference between abiotic and biotic. Give examples of each. Abiotic deal with things that are not living like soil and rocks and water. Biotic deals with living things such as plants, animals, and humans. 12. For each of the following biomes be able to describe general characteristics of each: Desert, Tundra, Coniferous forest (taiga), Temperate deciduous forest, grassland, tropical rain forest. Word Parts for Honors Biology Midterm Part a aerosan- Meaning without air, oxygen without Vocabulary abiotic aerobic anaerobic -ase autobiocarnis, caro chlorochroma, chromo -cyte, cytode- enzyme self life flesh sucrase autotroph biosphere carnivore green color diendo- two inner, inside true outside plant other, different water over, more under, less equal nucleus study of to loosen, cut euexoherba heterohydrohyperhypoisokaryo-logy lysis cell from Part magna Meaning big,large Vocabulary magnify micromonoomni -ose small one all sugar microscope monomer omnivore glucose -philic love hydrophilic chloroplast chromatograph y cytoplasm dehydration synthesis disaccharide endocytosis -phobic photo- fear light hydrophobic photosynthesis phyllon -phyto- leaf plant chlorophyll phytoplankton plasm-, -plasm poly- forming, liquid many cytoplasm polysaccharide eukaryotic exocytosis herbivore heterotroph primos, pro-sacchar stoma first before sugar mouth primary consumer prokaryote monosaccharide stomata hydrolysis hypertonic hypotonic isotonic karyotype biology lysosome syn- together ATP synthase transtri-, trestroph vacuos vorare across three feeding, nutrition empty devour transport triphosphate trophic level vacuole omnivore Essays 1. Explain the three parts of the cell theory and explain why it is important to biology? 2. Compare & contrast the photosynthesis equation with the cellular respiration equation. 3. Apply the induced-fit model of enzymes and substrates to sucrose / sucrase. How does denaturing affect an enzymatic reaction. 4. Trace the path and amount of energy from the sun to a quarternary level consumer in a food chain. Lab Practical 1. Be able to locate, draw, and label a cell using a microscope on high power. This is not part of the exam this year. It will be done prior to the exam.