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Chromosomes and Human Genetics Chapter 11 Genes • Units of information about heritable traits • In eukaryotes, distributed among chromosomes • Each has a particular locus – Location on a chromosome Homologous Chromosomes • Homologous autosomes are identical in length, size, shape, and gene sequence • Sex chromosomes are nonidentical but still homologous • Homologous chromosomes interact, then segregate from one another during meiosis Homologous Chromosomes Alleles • Different molecular forms of a gene • Arise through mutation • Diploid cell has a pair of alleles at each locus • Alleles on homologous chromosomes may be same or different Sex Chromosomes • Discovered in late 1800s • Mammals, fruit flies – XX is female, XY is male • In other groups XX is male, XY female • Human X and Y chromosomes function as homologues during meiosis Sex Determination eggs sperm X Y X X Female germ cell Male germ cell X X X XX XX Y XY XY sex chromosome combinations possible in new individual The Y Chromosome • Fewer than two dozen genes identified • One is the master gene for male sex determination – SRY gene (sex-determining region of Y) • SRY present, testes form • SRY absent, ovaries form Effect of Y Chromosome - anatomical development appearance of structures that will give rise to external genitalia appearance of “uncommitted” duct system of embryo at 7 weeks 7 weeks Y present Y absent Y present Y absent testes ovaries 10 weeks ovary birth approaching testis The X Chromosome • Carries more than 2,000 genes • Most genes deal with nonsexual traits • Genes on X chromosome can be expressed in both males and females Viewing chromosomes Karyotype Preparation Stopping the Cycle • Cultured cells are arrested at metaphase by adding colchicine • This is when cells are most condensed and easiest to identify Karyotype Preparation • Arrested cells are broken open • Metaphase chromosomes are fixed and stained • Chromosomes are photographed through microscope • Photograph of chromosomes is cut up and arranged to form karyotype diagram Human Karyotype Linkage groups Demo Need 20 students Linkage Groups • Genes on one type of chromosome • Fruit flies – 4 homologous chromosomes – 4 linkage groups • Indian corn – 10 homologous chromosomes – 10 linkage groups Full Linkage Parents: B AB A ab x B b A F1 offspring: a b a All AaBb meiosis, gamete formation 50% AB B A b a 50% ab With no crossovers, half of the gametes have one parental genotype and half have the other Incomplete Linkage AC A C Parents: ac c x A a a c C F1 offspring All AaCc meiosis, gamete formation Unequal ratios of four types of gametes: C A c a Most gametes have parental genotypes c A a C A smaller number have recombinant genotypes Crossover Frequency Proportional to the distance that separates genes Crossing over will disrupt linkage between A and B more often than C and D Cannot perform experiments on humans So…….. Human Genetic Analysis • Geneticists often gather information from several generations to increase the numbers for analysis • If a trait follows a simple Mendelian inheritance pattern they can be confident about predicting the probability of its showing up again Pedigree Dogs? Cats? Pedigree • Chart that shows genetic connections among individuals • Standardized symbols • Knowledge of probability and Mendelian patterns used to suggest basis of a trait • Conclusions most accurate when drawn from large number of pedigrees QuickTime™ and a TIFF (Uncompressed) decompressor are needed to see this picture. HELLO, HELLO, HELLO, HELLO, HELLO, HELLO Pedigree for Polydactyly… next slide too I II 5,5 6,6 * III IV 5,5 6,6 5,5 6,6 6 6,6 5,5 6,6 5,5 7 5,5 6,6 5,5 6,6 5,5 6,6 5,6 6,7 12 V *Gene not expressed in this carrier. 6,6 6,6 QuickTime™ and a TIFF (Uncompressed) decompressor are needed to see this picture. Genetic Disorder • A rare, uncommon version of a trait • Polydactyly – Unusual number of toes or fingers – Does not cause any health problems – View of trait as disfiguring is subjective QuickTime™ and a TIFF (Uncompressed) decompressor are needed to see this picture. Genetic Disorder • Inherited conditions that cause mild to severe medical problems • Why don’t they disappear? – Mutation introduces new rare alleles – In heterozygotes, harmful allele is masked, so it can still be passed on to offspring Auto Sex-linked Dominant Recessive Autosomal Dominant Inheritance • Trait typically appears in every generation QuickTime™ and a TIFF (Uncompressed) decompressor are needed to see this picture. Achondroplasia QuickTime™ and a TIFF (Uncompressed) decompressor are needed to see this picture. • Autosomal dominant allele • In homozygous form usually leads to stillbirth • Heterozygotes display a type of dwarfism • Have short arms and legs relative to other body parts Huntington Disorder • Autosomal dominant allele • Causes involuntary movements, nervous system deterioration, death • Symptoms don’t usually show up until person is past age 30 • People often pass allele on before they know they have it Auto Recessive…. Autosomal Recessive Inheritance Patterns • If parents are both heterozygous, child will have a 25% chance of being affected Galactosemia • Caused by autosomal recessive allele • Gene specifies a mutant enzyme in the pathway that breaks down lactose enzyme 1 LACTOSE enzyme 2 GALACTOSE + glucose enzyme 3 GALACTOSE-1PHOSOPHATE GALACTOSE-1PHOSOPHATE intermediate in glycolysis Sex-linked X-Linked Recessive Inheritance • Males show disorder more than females • Son cannot inherit disorder from his father Examples of X-Linked Traits • Color blindness – Inability to distinguish among some of all colors • Hemophilia – Blood-clotting disorder – 1/7,000 males has allele for hemophilia A – Was common in European royal families Hutchinson-Guilford Progeria • Mutation causes accelerated aging • No evidence of it running in families • Appears to be dominant • Seems to arise as spontaneous mutation • Usually causes death in early teens Duplication • Gene sequence that is repeated several to hundreds of times • Duplications occur in normal chromosomes • May have adaptive advantage – Useful mutations may occur in copy Duplication normal chromosome one segment repeated three repeats Inversion A linear stretch of DNA is reversed within the chromosome segments G, H, I become inverted Deletion • Loss of some segment of a chromosome • Most are lethal or cause serious disorder segment C deleted Translocation • A piece of one chromosome becomes attached to another nonhomologous chromosome • Most are reciprocal • Philadelphia chromosome arose from a reciprocal translocation between chromosomes 9 and 22 Translocation chromosome nonhomologous chromosome reciprocal translocation Philadelphia Chromosome • First abnormal chromosome to be associated with a cancer • Associated with a chronic leukemia – Overproduction of white blood cells A Reciprocal Translocation 1 2 Chromosome 9 and chromosome 22 6 exchanged pieces 13 19 15 20 An Altered Gene • When the reciprocal translocation occurred, a gene at the end of chromosome 9 fused with a gene from chromosome 22 • This hybrid gene encodes an abnormal protein that stimulates uncontrolled division of white blood cells Does Chromosome Structure Evolve? • Alterations in the structure of chromosomes generally are not good and tend to be selected against • Over evolutionary time, however, many alterations with neutral effects became built into the DNA of all species Aneuploidy • Individuals have one extra or less chromosome • (2n + 1 or 2n - 1) • Major cause of human reproductive failure • Most human miscarriages are aneuploids Polyploidy • Individuals have three or more of each type of chromosome (3n, 4n) • Common in flowering plants • Lethal for humans – 99% die before birth – Newborns die soon after birth Nondisjunction n+1 n+1 n-1 chromosome alignments at metaphase I nondisjunction at anaphase I alignments at metaphase II n-1 anaphase II chromosome number in gametes Down Syndrome • Trisomy of chromosome 21 • Mental impairment and a variety of additional defects • Can be detected before birth • Risk of Down syndrome increases dramatically in mothers over age 35 Turner Syndrome • Inheritance of only one X (XO) • 98% spontaneously aborted • Survivors are short, infertile females – No functional ovaries – Secondary sexual traits reduced – May be treated with hormones, surgery Klinefelter Syndrome • XXY condition • Results mainly from nondisjunction in mother (67%) • Phenotype is tall males – Sterile or nearly so – Feminized traits (sparse facial hair, somewhat enlarged breasts) – Treated with testosterone injections XYY Condition • Taller than average males • Most otherwise phenotypically normal • Some mentally impaired • Once thought to be predisposed to criminal behavior, but studies now discredit Genetic Screening • Large-scale screening programs detect affected persons • Newborns in United States routinely tested for PKU – Early detection allows dietary intervention and prevents brain impairment Phenotypic Treatments • Symptoms of many genetic disorders can be minimized or suppressed by – Dietary controls – Adjustments to environmental conditions – Surgery or hormonal treatments Prenatal Diagnosis • Amniocentesis • Chorionic villus sampling • Fetoscopy • All methods have some risks Genetic Counseling • Parents-to-be can seek genetic counseling to compare risks of diagnostic procedures against the risk that their child will be affected by a severe genetic disorder Preimplantation Diagnosis • Used with in-vitro fertilization • Mitotic divisions produce ball of 8 cells • All cells have same genes • One of the cells is removed and its genes analyzed • If cell has no defects, the embryo is implanted in uterus