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MOLECULES OF LIFE CH5 • All living things are made up of 4 classes of large biomolecules: o Proteins o Carbohydrates o Lipids o Nucleic acids • Molecular structure and biological function are intricately related I. Macromolecules • Large molecules made of thousands of atoms covalently bonded • 3 of the 4 biomolecules are polymers: proteins, carbs, nucleic acids • Polymer: a macromolecules made of repeating units called monomers The Synthesis and Breakdown of Macromolecules • Macromolecules are made by dehydration reactions • Macromolecules are broken down by hydrolysis reactions II. Carbohydrates • Sugars and the polymers of sugars o Monosaccharides o Disaccharides o polysaccharides A. Monosaccharides (CH2O) • structure o A single sugar ex: glucose o Classified by number of carbons in chain and location of carbonyl • Most monosaccharides exist as a ring • isomers o Molecules with same structural formula but different arrangement of atoms o Ex: glucose, fructose, and galactose • function oQuick energy source oImmediately enters into cellular respiration for production of ATP B. Disaccharides • Structure o2 monosaccharides linked via dehydration reactions oEX: sucrose, lactose • Function Energy C. Polysaccharides • Long chain of GLUCOSE molecules linked via dehydration reactions • 2 groups of polysaccharides o Storage: starch and glycogen o Structural: cellulose chitin 1. Storage polysaccharides • Glycogen – Stores glucose in animals – Many glucose molecules linked via α1-4 linkages • Starch – Stores glucose in plants – Many glucoses linked by α1-4 linkages – http://bcs.whfreeman.com/thelifewire/conte nt/chp03/0302002.html 2. structural polysaccharides • cellulose o forms cell wall in plants o many glucoses linked via β1-4 linkages • chitin o forms exoskeleton in arthropods and cell wall in fungi • Most animals have enzymes to break α1-4 linkage but not β1-4 linkage. • Most cellulose consumed exits as insoluble fiber • Only some bacteria have enzymes to break β1-4 linkage III. Lipids • Diverse group of hydrophobic molecules • Only macromolecule that doesn’t form polymer A. Triglycerides (fats and oils) • One glycerol + 3 fatty acids linked via dehydration reactions http://www2.nl.edu/jste/bioch em.htm Fatty Acid • Long chain of C and H with a carboxyl group • Usually 14 to 20 Cs • Fatty acids can be – Saturated: no carbon to carbon double bonds. Solid at room temp – Monounsaturated: 1 carbon to carbon double bond. Liquid at room temp – Polyunsaturated: more than 1 carbon to carbon double bond. Liquid at room temp – Function • Long term energy storage • Seeds use stored triglycerides as energy during germination • Insulation in mammals • http://bcs.whfreeman.com/thelifewire/ content/chp03/0302002.html B. Phospholipids • Structure o One glycerol + 2 fatty acids + 1 phosphate head • Property o Amphiphathic: polar charged phosphate head and nonpolar uncharged fatty acid tails • Function: o Make up phospholipid bilayer found in all biological membranes C. Waxes and Steroids • Waxes – Function as protective barrier • Steroids – Function as chemical messengers IV. Proteins • About 50% of all macromolecules are proteins A. Functions of Proteins • Polypeptide: long chain of amino acids • Protein: biologically functional molecule made of 1 or more polypeptides B. Amino Acids: monomer of proteins • general structure o all contain amino and carboxyl group but differ in their R group Groups of amino acids: based on the characteristics of R group Linking of amino acids • Link to form peptide bond • Each polypeptide has a unique order of amino acids http://www2.nl.edu/jste/biochem.htm http://bcs.whfreeman.com/thelifewire/conte nt/chp03/0302002.html Protein Structure • Protein structure is determined by the sequence of amino acids • Structure determines its function • As protein is being synthesized, it begins to fold into its correct shape • Proteins fold as a result of the interactions between amino acids in the polypeptide chain • http://www.ncbi.nlm.nih.gov/sites/entrez?db =structure There are 4 levels of protein structure • primary structure • number and order of amino acids in the protein chain • primary structure is determined by______________ • all proteins have a different primary structure • secondary structure – Hydrogen bonding between amino and carboxyl groups – 2 forms: α helix and β sheet • Tertiary structure – Interaction among the R groups of amino acids – Interactions include ionic bonds, hydrogen bonds, hydrophobic interactions, and covalent bonds – What type of amino acids involved in each? • Quaternary structure • 2 or more polypeptide chains associated together to form a functional protein • In a cell, special proteins called chaperonins help proteins fold into their shape • http://parasolwww.cs.tamu.edu/groups/amatogroup/resea rch/folding/proteinA.php • • What would happen if the primary structure of a protein was changed? D. Protein unfolding • Denaturation: unfolding of a protein as a result of changes in pH and temp V. Nucleic Acids • The information molecules: contain the code to make proteins • Structure – Long chains of nucleotides Nucleotides – Made of a: • 5 carbon sugar • Phosphate group • One of 4 bases • Function – DNA: stores hereditary info – RNA: expresses it